RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 PLCH2O75038 1416 aa10.96□□□□□ -0.65
PFDN5-217ENST00000552548 GLI2P10070 1586 aa10.95□□□□□ -0.66
PFDN5-217ENST00000552548 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
PFDN5-217ENST00000552548 MYOM3Q5VTT5 1437 aa10.95□□□□□ -0.66
PFDN5-217ENST00000552548 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
PFDN5-217ENST00000552548 CFDP1Q9UEE9 299 aaPredicted RBP10.95□□□□□ -0.66
PFDN5-217ENST00000552548 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
PFDN5-217ENST00000552548 FGD6Q6ZV73 1430 aa10.94□□□□□ -0.66
PFDN5-217ENST00000552548 RAPGEF3O95398 923 aa10.94□□□□□ -0.66
PFDN5-217ENST00000552548 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
PFDN5-217ENST00000552548 TRAPPC8Q9Y2L5 1435 aa10.93□□□□□ -0.66
PFDN5-217ENST00000552548 PREX2Q70Z35 1606 aa10.92□□□□□ -0.66
PFDN5-217ENST00000552548 AFAP1Q8N556 730 aa10.92□□□□□ -0.66
PFDN5-217ENST00000552548 FANCAO15360 1455 aa10.92□□□□□ -0.66
PFDN5-217ENST00000552548 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
PFDN5-217ENST00000552548 CAMSAP2Q08AD1 1489 aa10.91□□□□□ -0.66
PFDN5-217ENST00000552548 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
PFDN5-217ENST00000552548 PTPN23Q9H3S7 1636 aa10.9□□□□□ -0.66
PFDN5-217ENST00000552548 AKNAQ7Z591 1439 aa10.9□□□□□ -0.66
PFDN5-217ENST00000552548 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
PFDN5-217ENST00000552548 MYO5CQ9NQX4 1742 aa10.89□□□□□ -0.67
PFDN5-217ENST00000552548 SYCP2Q9BX26 1530 aa10.89□□□□□ -0.67
PFDN5-217ENST00000552548 EFCAB2Q5VUJ9 269 aa10.89□□□□□ -0.67
PFDN5-217ENST00000552548 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
PFDN5-217ENST00000552548 ABCC5O15440 1437 aa10.88□□□□□ -0.67
PFDN5-217ENST00000552548 TCOF1Q13428 1488 aaKnown RBP10.87□□□□□ -0.67
PFDN5-217ENST00000552548 ABCC1P33527 1531 aa10.87□□□□□ -0.67
PFDN5-217ENST00000552548 ADGRL1O94910 1474 aa10.87□□□□□ -0.67
PFDN5-217ENST00000552548 FRMPD1Q5SYB0 1578 aa10.86□□□□□ -0.67
PFDN5-217ENST00000552548 PCGF6Q9BYE7 350 aa10.85□□□□□ -0.67
PFDN5-217ENST00000552548 RRP7BPQ9NSQ0 103 aa10.85□□□□□ -0.67
PFDN5-217ENST00000552548 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
PFDN5-217ENST00000552548 YEATS2Q9ULM3 1422 aa10.84□□□□□ -0.67
PFDN5-217ENST00000552548 DAPK1P53355 1430 aa10.84□□□□□ -0.67
PFDN5-217ENST00000552548 ITSN2Q9NZM3 1697 aa10.83□□□□□ -0.68
PFDN5-217ENST00000552548 ARAP3Q8WWN8 1544 aa10.82□□□□□ -0.68
PFDN5-217ENST00000552548 POGZQ7Z3K3 1410 aa10.82□□□□□ -0.68
PFDN5-217ENST00000552548 NEO1Q92859 1461 aa10.81□□□□□ -0.68
PFDN5-217ENST00000552548 KDM6BO15054 1643 aa10.81□□□□□ -0.68
PFDN5-217ENST00000552548 TRIM26Q12899 539 aaPredicted RBP10.8□□□□□ -0.68
PFDN5-217ENST00000552548 SIGLEC1Q9BZZ2 1709 aa10.8□□□□□ -0.68
PFDN5-217ENST00000552548 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
PFDN5-217ENST00000552548 KIAA1107Q9UPP5 1409 aa10.79□□□□□ -0.68
PFDN5-217ENST00000552548 DNMT1P26358 1616 aaKnown RBP10.79□□□□□ -0.68
PFDN5-217ENST00000552548 TEX14Q8IWB6 1497 aa10.79□□□□□ -0.68
PFDN5-217ENST00000552548 RICTORQ6R327 1708 aa10.78□□□□□ -0.68
PFDN5-217ENST00000552548 C9orf84Q5VXU9 1444 aa10.78□□□□□ -0.68
PFDN5-217ENST00000552548 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
PFDN5-217ENST00000552548 CCDC141Q6ZP82 1450 aa10.78□□□□□ -0.68
PFDN5-217ENST00000552548 SPAG9O60271 1321 aaKnown RBP10.78□□□□□ -0.68
PFDN5-217ENST00000552548 ARHGEF5Q12774 1597 aa10.77□□□□□ -0.69
PFDN5-217ENST00000552548 ZFYVE16Q7Z3T8 1539 aa10.76□□□□□ -0.69
PFDN5-217ENST00000552548 KIDINS220Q9ULH0 1771 aa10.75□□□□□ -0.69
PFDN5-217ENST00000552548 KDM5CP41229 1560 aa10.75□□□□□ -0.69
PFDN5-217ENST00000552548 ABCA6Q8N139 1617 aa10.75□□□□□ -0.69
PFDN5-217ENST00000552548 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
PFDN5-217ENST00000552548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.74□□□□□ -0.69
PFDN5-217ENST00000552548 NCOA1Q15788 1441 aa10.74□□□□□ -0.69
PFDN5-217ENST00000552548 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
PFDN5-217ENST00000552548 ATP7AQ04656 1500 aa10.74□□□□□ -0.69
PFDN5-217ENST00000552548 CFAP74Q9C0B2 1584 aa10.73□□□□□ -0.69
PFDN5-217ENST00000552548 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
PFDN5-217ENST00000552548 NAIPQ13075 1403 aa10.73□□□□□ -0.69
PFDN5-217ENST00000552548 ZNF518AQ6AHZ1 1483 aa10.73□□□□□ -0.69
PFDN5-217ENST00000552548 DIP2CQ9Y2E4 1556 aa10.73□□□□□ -0.69
PFDN5-217ENST00000552548 TSPY4P0CV99 314 aa10.72□□□□□ -0.69
PFDN5-217ENST00000552548 TSPY10P0CW01 314 aa10.72□□□□□ -0.69
PFDN5-217ENST00000552548 MLECQ14165 292 aa10.72□□□□□ -0.69
PFDN5-217ENST00000552548 KIF15Q9NS87 1388 aa10.72□□□□□ -0.69
PFDN5-217ENST00000552548 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
PFDN5-217ENST00000552548 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
PFDN5-217ENST00000552548 MAST1Q9Y2H9 1570 aa10.7□□□□□ -0.7
PFDN5-217ENST00000552548 ZMYM4Q5VZL5 1548 aa10.7□□□□□ -0.7
PFDN5-217ENST00000552548 ADGRL2O95490 1459 aa10.7□□□□□ -0.7
PFDN5-217ENST00000552548 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
PFDN5-217ENST00000552548 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
PFDN5-217ENST00000552548 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
PFDN5-217ENST00000552548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.79e-8■■□□□ 13.2
PFDN5-217ENST00000552548 FOXD1Q16676 465 aa10.68□□□□□ -0.7
PFDN5-217ENST00000552548 RTEL1-TNFRSF6BF6WH68 1400 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 ANKRD30AQ9BXX3 1397 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 KIF3BO15066 747 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 ARHGEF40Q8TER5 1519 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 ATP10AO60312 1499 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 A2MP01023 1474 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
PFDN5-217ENST00000552548 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
PFDN5-217ENST00000552548 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
PFDN5-217ENST00000552548 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
PFDN5-217ENST00000552548 GGT6Q6P531 493 aa10.66□□□□□ -0.7
PFDN5-217ENST00000552548 SETD5Q9C0A6 1442 aa10.66□□□□□ -0.7
PFDN5-217ENST00000552548 ANKRD50Q9ULJ7 1429 aa10.66□□□□□ -0.7
PFDN5-217ENST00000552548 PLPPR3Q6T4P5 718 aa10.65□□□□□ -0.7
PFDN5-217ENST00000552548 PLXNC1O60486 1568 aa10.65□□□□□ -0.71
PFDN5-217ENST00000552548 ARID4BQ4LE39 1312 aaPredicted RBP10.64□□□□□ -0.71
PFDN5-217ENST00000552548 MROH1Q8NDA8 1641 aa10.64□□□□□ -0.71
PFDN5-217ENST00000552548 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
PFDN5-217ENST00000552548 TRIM52Q96A61 297 aa10.62□□□□□ -0.71
PFDN5-217ENST00000552548 GCC2Q8IWJ2 1684 aa10.62□□□□□ -0.71
PFDN5-217ENST00000552548 DUOX2Q9NRD8 1548 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms