RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
CACNB3-223ENST00000552480 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
CACNB3-223ENST00000552480 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
CACNB3-223ENST00000552480 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
CACNB3-223ENST00000552480 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
CACNB3-223ENST00000552480 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
CACNB3-223ENST00000552480 ZNF644Q9H582 1327 aaPredicted RBP18.9■□□□□ 0.62
CACNB3-223ENST00000552480 CROCC2H7BZ55 1655 aa18.89■□□□□ 0.61
CACNB3-223ENST00000552480 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
CACNB3-223ENST00000552480 ABCC5O15440 1437 aa18.89■□□□□ 0.61
CACNB3-223ENST00000552480 NAIPQ13075 1403 aa18.87■□□□□ 0.61
CACNB3-223ENST00000552480 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
CACNB3-223ENST00000552480 SAMD9LQ8IVG5 1584 aa18.86■□□□□ 0.61
CACNB3-223ENST00000552480 ASXL2Q76L83 1435 aa18.86■□□□□ 0.61
CACNB3-223ENST00000552480 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
CACNB3-223ENST00000552480 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
CACNB3-223ENST00000552480 ARHGAP5Q13017 1502 aa18.85■□□□□ 0.61
CACNB3-223ENST00000552480 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
CACNB3-223ENST00000552480 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
CACNB3-223ENST00000552480 ZNF777Q9ULD5 760 aaPredicted RBP18.85■□□□□ 0.61
CACNB3-223ENST00000552480 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
CACNB3-223ENST00000552480 ARAP3Q8WWN8 1544 aa18.84■□□□□ 0.61
CACNB3-223ENST00000552480 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
CACNB3-223ENST00000552480 PLCH2O75038 1416 aa18.83■□□□□ 0.61
CACNB3-223ENST00000552480 ABCA9Q8IUA7 1624 aa18.83■□□□□ 0.61
CACNB3-223ENST00000552480 CLSPNQ9HAW4 1339 aa18.82■□□□□ 0.6
CACNB3-223ENST00000552480 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
CACNB3-223ENST00000552480 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
CACNB3-223ENST00000552480 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
CACNB3-223ENST00000552480 MBD5Q9P267 1494 aa18.79■□□□□ 0.6
CACNB3-223ENST00000552480 CCDC141Q6ZP82 1450 aa18.77■□□□□ 0.6
CACNB3-223ENST00000552480 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
CACNB3-223ENST00000552480 RRP7BPQ9NSQ0 103 aa18.77■□□□□ 0.6
CACNB3-223ENST00000552480 SYCP2Q9BX26 1530 aa18.77■□□□□ 0.6
CACNB3-223ENST00000552480 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
CACNB3-223ENST00000552480 RSPH4AQ5TD94 716 aa18.75■□□□□ 0.59
CACNB3-223ENST00000552480 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
CACNB3-223ENST00000552480 ABCC1P33527 1531 aa18.74■□□□□ 0.59
CACNB3-223ENST00000552480 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
CACNB3-223ENST00000552480 EFCAB2Q5VUJ9 269 aa18.74■□□□□ 0.59
CACNB3-223ENST00000552480 KDM6BO15054 1643 aa18.74■□□□□ 0.59
CACNB3-223ENST00000552480 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
CACNB3-223ENST00000552480 ANKRD30AQ9BXX3 1397 aa18.73■□□□□ 0.59
CACNB3-223ENST00000552480 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
CACNB3-223ENST00000552480 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
CACNB3-223ENST00000552480 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.59
CACNB3-223ENST00000552480 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
CACNB3-223ENST00000552480 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
CACNB3-223ENST00000552480 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
CACNB3-223ENST00000552480 FANCAO15360 1455 aa18.68■□□□□ 0.58
CACNB3-223ENST00000552480 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
CACNB3-223ENST00000552480 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
CACNB3-223ENST00000552480 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
CACNB3-223ENST00000552480 GLI2P10070 1586 aa18.64■□□□□ 0.57
CACNB3-223ENST00000552480 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
CACNB3-223ENST00000552480 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
CACNB3-223ENST00000552480 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
CACNB3-223ENST00000552480 TRAPPC8Q9Y2L5 1435 aa18.61■□□□□ 0.57
CACNB3-223ENST00000552480 MAP3K4Q9Y6R4 1608 aa18.6■□□□□ 0.57
CACNB3-223ENST00000552480 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
CACNB3-223ENST00000552480 RTEL1-TNFRSF6BF6WH68 1400 aa18.58■□□□□ 0.57
CACNB3-223ENST00000552480 DIP2BQ9P265 1576 aa18.57■□□□□ 0.56
CACNB3-223ENST00000552480 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
CACNB3-223ENST00000552480 INO80Q9ULG1 1556 aaPredicted RBP18.56■□□□□ 0.56
CACNB3-223ENST00000552480 ZFYVE16Q7Z3T8 1539 aa18.56■□□□□ 0.56
CACNB3-223ENST00000552480 DUOX2Q9NRD8 1548 aa18.56■□□□□ 0.56
CACNB3-223ENST00000552480 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
CACNB3-223ENST00000552480 NEO1Q92859 1461 aa18.56■□□□□ 0.56
CACNB3-223ENST00000552480 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
CACNB3-223ENST00000552480 PZPP20742 1482 aa18.53■□□□□ 0.56
CACNB3-223ENST00000552480 ATP7AQ04656 1500 aa18.53■□□□□ 0.56
CACNB3-223ENST00000552480 SPAG9O60271 1321 aaKnown RBP18.52■□□□□ 0.56
CACNB3-223ENST00000552480 ERBINQ96RT1 1412 aa18.52■□□□□ 0.56
CACNB3-223ENST00000552480 MPHOSPH9Q99550 1183 aa18.52■□□□□ 0.56
CACNB3-223ENST00000552480 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.55
CACNB3-223ENST00000552480 UNC13BO14795 1591 aa18.51■□□□□ 0.55
CACNB3-223ENST00000552480 AFAP1Q8N556 730 aa18.5■□□□□ 0.55
CACNB3-223ENST00000552480 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
CACNB3-223ENST00000552480 KDM5CP41229 1560 aa18.49■□□□□ 0.55
CACNB3-223ENST00000552480 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
CACNB3-223ENST00000552480 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
CACNB3-223ENST00000552480 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.55
CACNB3-223ENST00000552480 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
CACNB3-223ENST00000552480 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
CACNB3-223ENST00000552480 KIDINS220Q9ULH0 1771 aa18.45■□□□□ 0.54
CACNB3-223ENST00000552480 NUP155O75694 1391 aa18.44■□□□□ 0.54
CACNB3-223ENST00000552480 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
CACNB3-223ENST00000552480 PPRC1Q5VV67 1664 aaKnown RBP18.44■□□□□ 0.54
CACNB3-223ENST00000552480 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
CACNB3-223ENST00000552480 MLH3Q9UHC1 1453 aa18.43■□□□□ 0.54
CACNB3-223ENST00000552480 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
CACNB3-223ENST00000552480 IQGAP3Q86VI3 1631 aa18.42■□□□□ 0.54
CACNB3-223ENST00000552480 EIF2AK4Q9P2K8 1649 aaKnown RBP18.42■□□□□ 0.54
CACNB3-223ENST00000552480 TEX14Q8IWB6 1497 aa18.42■□□□□ 0.54
CACNB3-223ENST00000552480 FAM135AQ9P2D6 1515 aa18.42■□□□□ 0.54
CACNB3-223ENST00000552480 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
CACNB3-223ENST00000552480 RICTORQ6R327 1708 aa18.4■□□□□ 0.54
CACNB3-223ENST00000552480 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
CACNB3-223ENST00000552480 DHX29Q7Z478 1369 aaKnown RBP18.38■□□□□ 0.53
CACNB3-223ENST00000552480 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms