RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ABCA9Q8IUA7 1624 aa9.47□□□□□ -0.89
CCDC65-204ENST00000552188 APLP2Q06481 763 aa9.47□□□□□ -0.89
CCDC65-204ENST00000552188 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
CCDC65-204ENST00000552188 LRRIQ1Q96JM4 1722 aa9.47□□□□□ -0.89
CCDC65-204ENST00000552188 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.89
CCDC65-204ENST00000552188 CAPN15O75808 1086 aa9.46□□□□□ -0.9
CCDC65-204ENST00000552188 MAGI3Q5TCQ9 1506 aa9.45□□□□□ -0.9
CCDC65-204ENST00000552188 PCF11O94913 1555 aaKnown RBP9.44□□□□□ -0.9
CCDC65-204ENST00000552188 MYO5CQ9NQX4 1742 aa9.43□□□□□ -0.9
CCDC65-204ENST00000552188 CFAP74Q9C0B2 1584 aa9.43□□□□□ -0.9
CCDC65-204ENST00000552188 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
CCDC65-204ENST00000552188 KIF14Q15058 1648 aa9.42□□□□□ -0.9
CCDC65-204ENST00000552188 CASKIN1Q8WXD9 1431 aa9.41□□□□□ -0.9
CCDC65-204ENST00000552188 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
CCDC65-204ENST00000552188 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
CCDC65-204ENST00000552188 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.9
CCDC65-204ENST00000552188 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
CCDC65-204ENST00000552188 TTC37Q6PGP7 1564 aa9.4□□□□□ -0.9
CCDC65-204ENST00000552188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.4□□□□□ -0.91
CCDC65-204ENST00000552188 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
CCDC65-204ENST00000552188 NEO1Q92859 1461 aa9.38□□□□□ -0.91
CCDC65-204ENST00000552188 TROQ12816 1431 aaPredicted RBP9.38□□□□□ -0.91
CCDC65-204ENST00000552188 ZNF219Q9P2Y4 722 aaPredicted RBP9.37□□□□□ -0.91
CCDC65-204ENST00000552188 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
CCDC65-204ENST00000552188 FANCAO15360 1455 aa9.36□□□□□ -0.91
CCDC65-204ENST00000552188 COL17A1Q9UMD9 1497 aaPredicted RBP9.36□□□□□ -0.91
CCDC65-204ENST00000552188 CDC42BPBQ9Y5S2 1711 aa9.35□□□□□ -0.91
CCDC65-204ENST00000552188 ARHGAP5Q13017 1502 aa9.35□□□□□ -0.91
CCDC65-204ENST00000552188 CDC42BPAQ5VT25 1732 aa9.34□□□□□ -0.91
CCDC65-204ENST00000552188 RICTORQ6R327 1708 aa9.34□□□□□ -0.91
CCDC65-204ENST00000552188 AKNAQ7Z591 1439 aa9.34□□□□□ -0.91
CCDC65-204ENST00000552188 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
CCDC65-204ENST00000552188 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
CCDC65-204ENST00000552188 PLCH2O75038 1416 aa9.33□□□□□ -0.92
CCDC65-204ENST00000552188 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
CCDC65-204ENST00000552188 RAPGEF3O95398 923 aa9.33□□□□□ -0.92
CCDC65-204ENST00000552188 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
CCDC65-204ENST00000552188 PREX2Q70Z35 1606 aa9.33□□□□□ -0.92
CCDC65-204ENST00000552188 DENND4BO75064 1496 aaPredicted RBP9.33□□□□□ -0.92
CCDC65-204ENST00000552188 ABCB7O75027 752 aa9.32□□□□□ -0.92
CCDC65-204ENST00000552188 ADGRL1O94910 1474 aa9.32□□□□□ -0.92
CCDC65-204ENST00000552188 ITSN2Q9NZM3 1697 aa9.31□□□□□ -0.92
CCDC65-204ENST00000552188 SUPT6HQ7KZ85 1726 aaKnown RBP9.31□□□□□ -0.92
CCDC65-204ENST00000552188 ZNF777Q9ULD5 760 aaPredicted RBP9.3□□□□□ -0.92
CCDC65-204ENST00000552188 EHBP1L1Q8N3D4 1523 aa9.3□□□□□ -0.92
CCDC65-204ENST00000552188 VPS8Q8N3P4 1428 aa9.3□□□□□ -0.92
CCDC65-204ENST00000552188 SCAPERQ9BY12 1400 aa9.3□□□□□ -0.92
CCDC65-204ENST00000552188 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
CCDC65-204ENST00000552188 FRMPD1Q5SYB0 1578 aa9.29□□□□□ -0.92
CCDC65-204ENST00000552188 CCNB3Q8WWL7 1395 aa9.28□□□□□ -0.92
CCDC65-204ENST00000552188 POLA2Q14181 598 aa9.28□□□□□ -0.92
CCDC65-204ENST00000552188 TIAM1Q13009 1591 aa9.28□□□□□ -0.92
CCDC65-204ENST00000552188 ZFYVE16Q7Z3T8 1539 aa9.26□□□□□ -0.93
CCDC65-204ENST00000552188 ARHGEF40Q8TER5 1519 aa9.26□□□□□ -0.93
CCDC65-204ENST00000552188 POGZQ7Z3K3 1410 aa9.26□□□□□ -0.93
CCDC65-204ENST00000552188 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
CCDC65-204ENST00000552188 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
CCDC65-204ENST00000552188 ZNF518AQ6AHZ1 1483 aa9.26□□□□□ -0.93
CCDC65-204ENST00000552188 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
CCDC65-204ENST00000552188 MAGI2Q86UL8 1455 aa9.25□□□□□ -0.93
CCDC65-204ENST00000552188 ABCC1P33527 1531 aa9.25□□□□□ -0.93
CCDC65-204ENST00000552188 HECW2Q9P2P5 1572 aa9.24□□□□□ -0.93
CCDC65-204ENST00000552188 DSG3P32926 999 aa9.24□□□□□ -0.93
CCDC65-204ENST00000552188 BCORL1Q5H9F3 1711 aa9.24□□□□□ -0.93
CCDC65-204ENST00000552188 GPATCH8Q9UKJ3 1502 aaKnown RBP9.24□□□□□ -0.93
CCDC65-204ENST00000552188 SAMD9LQ8IVG5 1584 aa9.24□□□□□ -0.93
CCDC65-204ENST00000552188 PLEKHH2Q8IVE3 1493 aa9.23□□□□□ -0.93
CCDC65-204ENST00000552188 NCOA2Q15596 1464 aa9.22□□□□□ -0.93
CCDC65-204ENST00000552188 AFAP1Q8N556 730 aa9.22□□□□□ -0.93
CCDC65-204ENST00000552188 RIMS1Q86UR5 1692 aaKnown RBP9.22□□□□□ -0.93
CCDC65-204ENST00000552188 FER1L4A9Z1Z3 1794 aa9.22□□□□□ -0.93
CCDC65-204ENST00000552188 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.93
CCDC65-204ENST00000552188 MAP3K1Q13233 1512 aa9.21□□□□□ -0.93
CCDC65-204ENST00000552188 SYCP2Q9BX26 1530 aa9.21□□□□□ -0.93
CCDC65-204ENST00000552188 KDM5CP41229 1560 aa9.21□□□□□ -0.93
CCDC65-204ENST00000552188 HNRNPMP52272 730 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC65-204ENST00000552188 MLECQ14165 292 aa9.21□□□□□ -0.94
CCDC65-204ENST00000552188 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.94
CCDC65-204ENST00000552188 ATP10AO60312 1499 aa9.21□□□□□ -0.94
CCDC65-204ENST00000552188 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
CCDC65-204ENST00000552188 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
CCDC65-204ENST00000552188 TRAPPC8Q9Y2L5 1435 aa9.2□□□□□ -0.94
CCDC65-204ENST00000552188 MADDQ8WXG6 1647 aa9.2□□□□□ -0.94
CCDC65-204ENST00000552188 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
CCDC65-204ENST00000552188 SPAG9O60271 1321 aaKnown RBP9.19□□□□□ -0.94
CCDC65-204ENST00000552188 ARHGEF12Q9NZN5 1544 aa9.19□□□□□ -0.94
CCDC65-204ENST00000552188 DIP2CQ9Y2E4 1556 aa9.19□□□□□ -0.94
CCDC65-204ENST00000552188 ABCA6Q8N139 1617 aa9.19□□□□□ -0.94
CCDC65-204ENST00000552188 SIGLEC1Q9BZZ2 1709 aa9.18□□□□□ -0.94
CCDC65-204ENST00000552188 ESF1Q9H501 851 aaKnown RBP9.18□□□□□ -0.94
CCDC65-204ENST00000552188 MLH3Q9UHC1 1453 aa9.18□□□□□ -0.94
CCDC65-204ENST00000552188 ADGBQ8N7X0 1667 aa9.17□□□□□ -0.94
CCDC65-204ENST00000552188 KIAA1107Q9UPP5 1409 aa9.17□□□□□ -0.94
CCDC65-204ENST00000552188 KANK4Q5T7N3 995 aaPredicted RBP9.17□□□□□ -0.94
CCDC65-204ENST00000552188 ATP7AQ04656 1500 aa9.16□□□□□ -0.94
CCDC65-204ENST00000552188 CAMSAP2Q08AD1 1489 aa9.16□□□□□ -0.94
CCDC65-204ENST00000552188 ZNF644Q9H582 1327 aaPredicted RBP9.16□□□□□ -0.94
CCDC65-204ENST00000552188 TSPY4P0CV99 314 aa9.15□□□□□ -0.94
CCDC65-204ENST00000552188 TSPY10P0CW01 314 aa9.15□□□□□ -0.94
CCDC65-204ENST00000552188 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms