RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 KDM5BQ9UGL1 1544 aa15.05■□□□□ -0
ATP2B1-207ENST00000550716 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
ATP2B1-207ENST00000550716 COL17A1Q9UMD9 1497 aaPredicted RBP15.02■□□□□ -0
ATP2B1-207ENST00000550716 ZCCHC11Q5TAX3 1644 aaKnown RBP15.01□□□□□ -0.01
ATP2B1-207ENST00000550716 MAP3K4Q9Y6R4 1608 aa14.98□□□□□ -0.01
ATP2B1-207ENST00000550716 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
ATP2B1-207ENST00000550716 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
ATP2B1-207ENST00000550716 CTTNBP2Q8WZ74 1663 aa14.95□□□□□ -0.02
ATP2B1-207ENST00000550716 WDR7Q9Y4E6 1490 aa14.95□□□□□ -0.02
ATP2B1-207ENST00000550716 ABCA8O94911 1581 aa14.94□□□□□ -0.02
ATP2B1-207ENST00000550716 ADGRL1O94910 1474 aa14.93□□□□□ -0.02
ATP2B1-207ENST00000550716 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
ATP2B1-207ENST00000550716 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
ATP2B1-207ENST00000550716 TEX14Q8IWB6 1497 aa14.9□□□□□ -0.02
ATP2B1-207ENST00000550716 FARP1Q9Y4F1 1045 aaPredicted RBP14.88□□□□□ -0.03
ATP2B1-207ENST00000550716 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
ATP2B1-207ENST00000550716 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
ATP2B1-207ENST00000550716 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
ATP2B1-207ENST00000550716 CD109Q6YHK3 1445 aa14.85□□□□□ -0.03
ATP2B1-207ENST00000550716 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
ATP2B1-207ENST00000550716 HAX1O00165 279 aa14.83□□□□□ -0.04
ATP2B1-207ENST00000550716 MIER1Q8N108 512 aa14.83□□□□□ -0.04
ATP2B1-207ENST00000550716 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
ATP2B1-207ENST00000550716 ATP10BO94823 1461 aa14.82□□□□□ -0.04
ATP2B1-207ENST00000550716 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
ATP2B1-207ENST00000550716 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
ATP2B1-207ENST00000550716 SAMD9Q5K651 1589 aa14.8□□□□□ -0.04
ATP2B1-207ENST00000550716 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
ATP2B1-207ENST00000550716 VASPP50552 380 aaPredicted RBP14.76□□□□□ -0.05
ATP2B1-207ENST00000550716 HECW2Q9P2P5 1572 aa14.75□□□□□ -0.05
ATP2B1-207ENST00000550716 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
ATP2B1-207ENST00000550716 KIF21BO75037 1637 aa14.74□□□□□ -0.05
ATP2B1-207ENST00000550716 RAPGEF6Q8TEU7 1601 aa14.74□□□□□ -0.05
ATP2B1-207ENST00000550716 ARAP3Q8WWN8 1544 aa14.73□□□□□ -0.05
ATP2B1-207ENST00000550716 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
ATP2B1-207ENST00000550716 NUP153P49790 1475 aaKnown RBP14.73□□□□□ -0.05
ATP2B1-207ENST00000550716 ABCA9Q8IUA7 1624 aa14.73□□□□□ -0.05
ATP2B1-207ENST00000550716 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
ATP2B1-207ENST00000550716 FAM9AQ8IZU1 332 aaPredicted RBP14.7□□□□□ -0.06
ATP2B1-207ENST00000550716 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
ATP2B1-207ENST00000550716 RAPGEF3O95398 923 aa14.68□□□□□ -0.06
ATP2B1-207ENST00000550716 CD44P16070 742 aaKnown RBP14.68□□□□□ -0.06
ATP2B1-207ENST00000550716 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
ATP2B1-207ENST00000550716 EEA1Q15075 1411 aa14.66□□□□□ -0.06
ATP2B1-207ENST00000550716 EVX2Q03828 476 aa14.66□□□□□ -0.06
ATP2B1-207ENST00000550716 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
ATP2B1-207ENST00000550716 NEO1Q92859 1461 aa14.64□□□□□ -0.07
ATP2B1-207ENST00000550716 PHLDB1Q86UU1 1377 aa14.61□□□□□ -0.07
ATP2B1-207ENST00000550716 ADAMTSL3P82987 1691 aa14.6□□□□□ -0.07
ATP2B1-207ENST00000550716 PTPRMP28827 1452 aa14.59□□□□□ -0.07
ATP2B1-207ENST00000550716 SP7Q8TDD2 431 aaPredicted RBP14.59□□□□□ -0.07
ATP2B1-207ENST00000550716 EFCAB5A4FU69 1503 aa14.59□□□□□ -0.07
ATP2B1-207ENST00000550716 CDK13Q14004 1512 aaKnown RBP14.59□□□□□ -0.07
ATP2B1-207ENST00000550716 TTC37Q6PGP7 1564 aa14.59□□□□□ -0.07
ATP2B1-207ENST00000550716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.58□□□□□ -0.08
ATP2B1-207ENST00000550716 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
ATP2B1-207ENST00000550716 ARHGEF40Q8TER5 1519 aa14.56□□□□□ -0.08
ATP2B1-207ENST00000550716 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
ATP2B1-207ENST00000550716 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
ATP2B1-207ENST00000550716 AKNAQ7Z591 1439 aa14.56□□□□□ -0.08
ATP2B1-207ENST00000550716 FANCAO15360 1455 aa14.56□□□□□ -0.08
ATP2B1-207ENST00000550716 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
ATP2B1-207ENST00000550716 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
ATP2B1-207ENST00000550716 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
ATP2B1-207ENST00000550716 BCORL1Q5H9F3 1711 aa14.55□□□□□ -0.08
ATP2B1-207ENST00000550716 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
ATP2B1-207ENST00000550716 YEATS2Q9ULM3 1422 aa14.53□□□□□ -0.08
ATP2B1-207ENST00000550716 SIGLEC1Q9BZZ2 1709 aa14.52□□□□□ -0.08
ATP2B1-207ENST00000550716 ARID4BQ4LE39 1312 aaPredicted RBP14.52□□□□□ -0.08
ATP2B1-207ENST00000550716 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
ATP2B1-207ENST00000550716 IFNLR1Q8IU57 520 aaPredicted RBP14.51□□□□□ -0.09
ATP2B1-207ENST00000550716 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
ATP2B1-207ENST00000550716 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
ATP2B1-207ENST00000550716 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
ATP2B1-207ENST00000550716 CFAP74Q9C0B2 1584 aa14.49□□□□□ -0.09
ATP2B1-207ENST00000550716 LMTK3Q96Q04 1460 aa14.49□□□□□ -0.09
ATP2B1-207ENST00000550716 ZFYVE16Q7Z3T8 1539 aa14.48□□□□□ -0.09
ATP2B1-207ENST00000550716 UBTFP17480 764 aaKnown RBP14.48□□□□□ -0.09
ATP2B1-207ENST00000550716 NUBP1P53384 320 aa14.48□□□□□ -0.09
ATP2B1-207ENST00000550716 HECW1Q76N89 1606 aa14.48□□□□□ -0.09
ATP2B1-207ENST00000550716 PCF11O94913 1555 aaKnown RBP14.47□□□□□ -0.09
ATP2B1-207ENST00000550716 RIMS1Q86UR5 1692 aaKnown RBP14.47□□□□□ -0.09
ATP2B1-207ENST00000550716 PLCH2O75038 1416 aa14.47□□□□□ -0.09
ATP2B1-207ENST00000550716 POGZQ7Z3K3 1410 aa14.47□□□□□ -0.09
ATP2B1-207ENST00000550716 KIF14Q15058 1648 aa14.46□□□□□ -0.09
ATP2B1-207ENST00000550716 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
ATP2B1-207ENST00000550716 ATP1B4Q9UN42 357 aaPredicted RBP14.46□□□□□ -0.09
ATP2B1-207ENST00000550716 SCAPERQ9BY12 1400 aa14.46□□□□□ -0.09
ATP2B1-207ENST00000550716 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
ATP2B1-207ENST00000550716 MLECQ14165 292 aa14.42□□□□□ -0.1
ATP2B1-207ENST00000550716 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
ATP2B1-207ENST00000550716 MAGI2Q86UL8 1455 aa14.42□□□□□ -0.1
ATP2B1-207ENST00000550716 HSPA2P54652 639 aa14.41□□□□□ -0.1
ATP2B1-207ENST00000550716 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
ATP2B1-207ENST00000550716 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
ATP2B1-207ENST00000550716 TROQ12816 1431 aaPredicted RBP14.41□□□□□ -0.1
ATP2B1-207ENST00000550716 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
ATP2B1-207ENST00000550716 EFCAB2Q5VUJ9 269 aa14.38□□□□□ -0.11
ATP2B1-207ENST00000550716 SPOCK2Q92563 424 aa14.38□□□□□ -0.11
ATP2B1-207ENST00000550716 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms