RNA–Protein interactions for RNA: ENST00000550590.5

PMEL-216, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-216ENST00000550590 USP35Q9P2H5 1018 aa8.42□□□□□ -1.06
PMEL-216ENST00000550590 NOP58Q9Y2X3 529 aaKnown RBP8.42□□□□□ -1.06
PMEL-216ENST00000550590 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
PMEL-216ENST00000550590 ABCC9O60706 1549 aa8.4□□□□□ -1.06
PMEL-216ENST00000550590 WASHC2AQ641Q2 1341 aa8.38□□□□□ -1.07
PMEL-216ENST00000550590 CCER2I3L3R5 266 aa8.38□□□□□ -1.07
PMEL-216ENST00000550590 CCDC136Q96JN2 1154 aa8.38□□□□□ -1.07
PMEL-216ENST00000550590 WASHC2CQ9Y4E1 1318 aa8.37□□□□□ -1.07
PMEL-216ENST00000550590 RB1CC1Q8TDY2 1594 aa8.37□□□□□ -1.07
PMEL-216ENST00000550590 IFNL1Q8IU54 200 aa8.37□□□□□ -1.07
PMEL-216ENST00000550590 PLEKHG5O94827 1062 aa8.36□□□□□ -1.07
PMEL-216ENST00000550590 BCANQ96GW7 911 aa8.36□□□□□ -1.07
PMEL-216ENST00000550590 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
PMEL-216ENST00000550590 TNIKQ9UKE5 1360 aa8.34□□□□□ -1.07
PMEL-216ENST00000550590 EEA1Q15075 1411 aa8.33□□□□□ -1.08
PMEL-216ENST00000550590 IL27Q8NEV9 243 aa8.32□□□□□ -1.08
PMEL-216ENST00000550590 CEP162Q5TB80 1403 aa8.31□□□□□ -1.08
PMEL-216ENST00000550590 PPP4R2Q9NY27 417 aa8.31□□□□□ -1.08
PMEL-216ENST00000550590 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.3□□□□□ -1.08
PMEL-216ENST00000550590 IPO9Q96P70 1041 aaKnown RBP8.29□□□□□ -1.08
PMEL-216ENST00000550590 ANP32AP39687 249 aaKnown RBP8.28□□□□□ -1.08
PMEL-216ENST00000550590 FAM43AQ8N2R8 423 aa8.28□□□□□ -1.08
PMEL-216ENST00000550590 RSF1Q96T23 1441 aaPredicted RBP8.28□□□□□ -1.08
PMEL-216ENST00000550590 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
PMEL-216ENST00000550590 NBR1Q14596 966 aa8.26□□□□□ -1.09
PMEL-216ENST00000550590 L3MBTL3Q96JM7 780 aaPredicted RBP8.26□□□□□ -1.09
PMEL-216ENST00000550590 DHX57Q6P158 1386 aaKnown RBP8.25□□□□□ -1.09
PMEL-216ENST00000550590 ITGAEP38570 1179 aa8.25□□□□□ -1.09
PMEL-216ENST00000550590 ZMYND15Q9H091 742 aa8.25□□□□□ -1.09
PMEL-216ENST00000550590 ZBTB47Q9UFB7 747 aaPredicted RBP8.25□□□□□ -1.09
PMEL-216ENST00000550590 CUX2O14529 1486 aa8.24□□□□□ -1.09
PMEL-216ENST00000550590 ERBB3P21860 1342 aa8.24□□□□□ -1.09
PMEL-216ENST00000550590 RRP9O43818 475 aaKnown RBP8.23□□□□□ -1.09
PMEL-216ENST00000550590 PTGER2P43116 358 aa8.23□□□□□ -1.09
PMEL-216ENST00000550590 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
PMEL-216ENST00000550590 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
PMEL-216ENST00000550590 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
PMEL-216ENST00000550590 PROM2Q8N271 834 aa8.19□□□□□ -1.1
PMEL-216ENST00000550590 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
PMEL-216ENST00000550590 ANP32CO43423 234 aa8.18□□□□□ -1.1
PMEL-216ENST00000550590 NEFMP07197 916 aa8.18□□□□□ -1.1
PMEL-216ENST00000550590 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
PMEL-216ENST00000550590 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
PMEL-216ENST00000550590 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
PMEL-216ENST00000550590 HOXB3P14651 431 aaPredicted RBP8.17□□□□□ -1.1
PMEL-216ENST00000550590 GSE1Q14687 1217 aa8.17□□□□□ -1.1
PMEL-216ENST00000550590 NACADO15069 1562 aa8.17□□□□□ -1.1
PMEL-216ENST00000550590 NCAPD3P42695 1498 aa8.16□□□□□ -1.1
PMEL-216ENST00000550590 NUBP1P53384 320 aa8.16□□□□□ -1.1
PMEL-216ENST00000550590 FAM212AQ96EL1 285 aa8.16□□□□□ -1.1
PMEL-216ENST00000550590 CENPJQ9HC77 1338 aaPredicted RBP8.16□□□□□ -1.1
PMEL-216ENST00000550590 GOLGA3Q08378 1498 aa8.15□□□□□ -1.1
PMEL-216ENST00000550590 FGD1P98174 961 aa8.15□□□□□ -1.1
PMEL-216ENST00000550590 VARS2Q5ST30 1063 aaKnown RBP8.15□□□□□ -1.1
PMEL-216ENST00000550590 EIF4G1Q04637 1599 aaKnown RBP8.14□□□□□ -1.11
PMEL-216ENST00000550590 CEP164Q9UPV0 1460 aa8.14□□□□□ -1.11
PMEL-216ENST00000550590 KCNH8Q96L42 1107 aa8.14□□□□□ -1.11
PMEL-216ENST00000550590 PLA2G2EQ9NZK7 142 aa8.14□□□□□ -1.11
PMEL-216ENST00000550590 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
PMEL-216ENST00000550590 AAMPQ13685 434 aa8.13□□□□□ -1.11
PMEL-216ENST00000550590 PDE4CQ08493 712 aa8.12□□□□□ -1.11
PMEL-216ENST00000550590 HSP90AA2PQ14568 343 aaPredicted RBP8.12□□□□□ -1.11
PMEL-216ENST00000550590 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
PMEL-216ENST00000550590 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
PMEL-216ENST00000550590 DOK7Q18PE1 504 aa8.11□□□□□ -1.11
PMEL-216ENST00000550590 ZNF687Q8N1G0 1237 aa8.11□□□□□ -1.11
PMEL-216ENST00000550590 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
PMEL-216ENST00000550590 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
PMEL-216ENST00000550590 CALD1Q05682 793 aaKnown RBP8.1□□□□□ -1.11
PMEL-216ENST00000550590 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
PMEL-216ENST00000550590 HSP90AA1P07900 732 aaKnown RBP8.09□□□□□ -1.11
PMEL-216ENST00000550590 GOLGA2Q08379 1002 aa8.09□□□□□ -1.11
PMEL-216ENST00000550590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.09□□□□□ -1.11
PMEL-216ENST00000550590 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
PMEL-216ENST00000550590 MS4A1P11836 297 aa8.08□□□□□ -1.12
PMEL-216ENST00000550590 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
PMEL-216ENST00000550590 RBM10P98175 930 aaKnown RBP8.08□□□□□ -1.12
PMEL-216ENST00000550590 TRIM52Q96A61 297 aa8.08□□□□□ -1.12
PMEL-216ENST00000550590 RRBP1Q9P2E9 1410 aaKnown RBP8.08□□□□□ -1.12
PMEL-216ENST00000550590 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
PMEL-216ENST00000550590 RANGAP1P46060 587 aaPredicted RBP8.07□□□□□ -1.12
PMEL-216ENST00000550590 PCDHB8Q9UN66 801 aa8.07□□□□□ -1.12
PMEL-216ENST00000550590 TCERG1O14776 1098 aaKnown RBP8.06□□□□□ -1.12
PMEL-216ENST00000550590 ZNF326Q5BKZ1 582 aaKnown RBP8.06□□□□□ -1.12
PMEL-216ENST00000550590 KIF21BO75037 1637 aa8.06□□□□□ -1.12
PMEL-216ENST00000550590 RNF123Q5XPI4 1314 aa8.05□□□□□ -1.12
PMEL-216ENST00000550590 CLIP1P30622 1438 aa8.05□□□□□ -1.12
PMEL-216ENST00000550590 DDX10Q13206 875 aaKnown RBP8.05□□□□□ -1.12
PMEL-216ENST00000550590 L1TD1Q5T7N2 865 aaKnown RBP8.05□□□□□ -1.12
PMEL-216ENST00000550590 ANKRD13DQ6ZTN6 518 aa8.05□□□□□ -1.12
PMEL-216ENST00000550590 ZBED9Q6R2W3 1325 aa8.04□□□□□ -1.12
PMEL-216ENST00000550590 NCLP19338 710 aaKnown RBP8.04□□□□□ -1.12
PMEL-216ENST00000550590 TAF7LQ5H9L4 462 aa8.04□□□□□ -1.12
PMEL-216ENST00000550590 PEG3Q9GZU2 1588 aa8.04□□□□□ -1.12
PMEL-216ENST00000550590 EHMT2Q96KQ7 1210 aa8.03□□□□□ -1.12
PMEL-216ENST00000550590 PDCL3Q9H2J4 239 aa8.03□□□□□ -1.12
PMEL-216ENST00000550590 G3V3G9 751 aa8.02□□□□□ -1.13
PMEL-216ENST00000550590 TPM2P07951 284 aa8.02□□□□□ -1.13
PMEL-216ENST00000550590 PYGBP11216 843 aa8.02□□□□□ -1.13
PMEL-216ENST00000550590 CLCN1P35523 988 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms