RNA–Protein interactions for RNA: ENST00000549564.1

PMEL-213, Transcript of premelanosome protein, humanhuman

TSL 5

Gene PMEL, Length 503 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-213ENST00000549564 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
PMEL-213ENST00000549564 ZMYM4Q5VZL5 1548 aa20.86■□□□□ 0.93
PMEL-213ENST00000549564 POGZQ7Z3K3 1410 aa20.86■□□□□ 0.93
PMEL-213ENST00000549564 AFAP1Q8N556 730 aa20.83■□□□□ 0.93
PMEL-213ENST00000549564 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.92
PMEL-213ENST00000549564 CFAP74Q9C0B2 1584 aa20.83■□□□□ 0.92
PMEL-213ENST00000549564 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.92
PMEL-213ENST00000549564 HECW1Q76N89 1606 aa20.82■□□□□ 0.92
PMEL-213ENST00000549564 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
PMEL-213ENST00000549564 ATP10AO60312 1499 aa20.8■□□□□ 0.92
PMEL-213ENST00000549564 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
PMEL-213ENST00000549564 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
PMEL-213ENST00000549564 CEBPAP49715 358 aaPredicted RBP20.76■□□□□ 0.91
PMEL-213ENST00000549564 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
PMEL-213ENST00000549564 KIF14Q15058 1648 aa20.71■□□□□ 0.91
PMEL-213ENST00000549564 ARHGEF12Q9NZN5 1544 aa20.7■□□□□ 0.9
PMEL-213ENST00000549564 CLIP1P30622 1438 aa20.69■□□□□ 0.9
PMEL-213ENST00000549564 MYT1LQ9UL68 1186 aa20.68■□□□□ 0.9
PMEL-213ENST00000549564 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
PMEL-213ENST00000549564 CERKQ8TCT0 537 aa20.67■□□□□ 0.9
PMEL-213ENST00000549564 ARHGAP5Q13017 1502 aa20.66■□□□□ 0.9
PMEL-213ENST00000549564 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
PMEL-213ENST00000549564 CASKIN1Q8WXD9 1431 aa20.65■□□□□ 0.9
PMEL-213ENST00000549564 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
PMEL-213ENST00000549564 KDM5CP41229 1560 aa20.63■□□□□ 0.89
PMEL-213ENST00000549564 MLH3Q9UHC1 1453 aa20.63■□□□□ 0.89
PMEL-213ENST00000549564 LRRIQ1Q96JM4 1722 aa20.61■□□□□ 0.89
PMEL-213ENST00000549564 FER1L4A9Z1Z3 1794 aa20.61■□□□□ 0.89
PMEL-213ENST00000549564 CDC42BPBQ9Y5S2 1711 aa20.58■□□□□ 0.88
PMEL-213ENST00000549564 DIP2CQ9Y2E4 1556 aa20.57■□□□□ 0.88
PMEL-213ENST00000549564 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
PMEL-213ENST00000549564 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
PMEL-213ENST00000549564 HNRNPMP52272 730 aaKnown RBP eCLIP20.55■□□□□ 0.88
PMEL-213ENST00000549564 ZNF777Q9ULD5 760 aaPredicted RBP20.55■□□□□ 0.88
PMEL-213ENST00000549564 SETD1BQ9UPS6 1966 aaKnown RBP20.55■□□□□ 0.88
PMEL-213ENST00000549564 REREQ9P2R6 1566 aa20.55■□□□□ 0.88
PMEL-213ENST00000549564 AGLP35573 1532 aa20.54■□□□□ 0.88
PMEL-213ENST00000549564 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
PMEL-213ENST00000549564 ABCC1P33527 1531 aa20.52■□□□□ 0.87
PMEL-213ENST00000549564 UHRF1BP1Q6BDS2 1440 aa20.52■□□□□ 0.87
PMEL-213ENST00000549564 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
PMEL-213ENST00000549564 ABCA6Q8N139 1617 aa20.5■□□□□ 0.87
PMEL-213ENST00000549564 PREX2Q70Z35 1606 aa20.49■□□□□ 0.87
PMEL-213ENST00000549564 PREX1Q8TCU6 1659 aa20.48■□□□□ 0.87
PMEL-213ENST00000549564 CFDP1Q9UEE9 299 aaPredicted RBP20.48■□□□□ 0.87
PMEL-213ENST00000549564 FYCO1Q9BQS8 1478 aa20.48■□□□□ 0.87
PMEL-213ENST00000549564 SPAG9O60271 1321 aaKnown RBP20.48■□□□□ 0.87
PMEL-213ENST00000549564 STRCQ7RTU9 1775 aa20.47■□□□□ 0.87
PMEL-213ENST00000549564 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
PMEL-213ENST00000549564 ZMYM3Q14202 1370 aa20.45■□□□□ 0.86
PMEL-213ENST00000549564 PTPRTO14522 1441 aa20.44■□□□□ 0.86
PMEL-213ENST00000549564 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
PMEL-213ENST00000549564 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
PMEL-213ENST00000549564 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
PMEL-213ENST00000549564 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
PMEL-213ENST00000549564 SAMD9LQ8IVG5 1584 aa20.43■□□□□ 0.86
PMEL-213ENST00000549564 C3P01024 1663 aa20.42■□□□□ 0.86
PMEL-213ENST00000549564 ZNF644Q9H582 1327 aaPredicted RBP20.41■□□□□ 0.86
PMEL-213ENST00000549564 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
PMEL-213ENST00000549564 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
PMEL-213ENST00000549564 GGT6Q6P531 493 aa20.37■□□□□ 0.85
PMEL-213ENST00000549564 NPATQ14207 1427 aa20.36■□□□□ 0.85
PMEL-213ENST00000549564 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
PMEL-213ENST00000549564 PPP6R1Q9UPN7 881 aa20.35■□□□□ 0.85
PMEL-213ENST00000549564 PLEKHH2Q8IVE3 1493 aa20.35■□□□□ 0.85
PMEL-213ENST00000549564 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
PMEL-213ENST00000549564 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
PMEL-213ENST00000549564 A2MP01023 1474 aa20.34■□□□□ 0.85
PMEL-213ENST00000549564 MBD5Q9P267 1494 aa20.32■□□□□ 0.84
PMEL-213ENST00000549564 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
PMEL-213ENST00000549564 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
PMEL-213ENST00000549564 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
PMEL-213ENST00000549564 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
PMEL-213ENST00000549564 PLXNC1O60486 1568 aa20.27■□□□□ 0.84
PMEL-213ENST00000549564 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.84
PMEL-213ENST00000549564 PKD2Q13563 968 aa20.27■□□□□ 0.84
PMEL-213ENST00000549564 ILDR2Q71H61 639 aa20.26■□□□□ 0.83
PMEL-213ENST00000549564 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
PMEL-213ENST00000549564 RTEL1-TNFRSF6BF6WH68 1400 aa20.26■□□□□ 0.83
PMEL-213ENST00000549564 INO80Q9ULG1 1556 aaPredicted RBP20.25■□□□□ 0.83
PMEL-213ENST00000549564 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
PMEL-213ENST00000549564 MROH2AA6NES4 1674 aa20.25■□□□□ 0.83
PMEL-213ENST00000549564 ZNF335Q9H4Z2 1342 aaPredicted RBP20.24■□□□□ 0.83
PMEL-213ENST00000549564 RSPH4AQ5TD94 716 aa20.23■□□□□ 0.83
PMEL-213ENST00000549564 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
PMEL-213ENST00000549564 DISP3Q9P2K9 1392 aa20.22■□□□□ 0.83
PMEL-213ENST00000549564 KIF3BO15066 747 aa20.22■□□□□ 0.83
PMEL-213ENST00000549564 TIAM1Q13009 1591 aa20.21■□□□□ 0.83
PMEL-213ENST00000549564 CLTCQ00610 1675 aaKnown RBP20.2■□□□□ 0.82
PMEL-213ENST00000549564 IQSEC2Q5JU85 1478 aa20.2■□□□□ 0.82
PMEL-213ENST00000549564 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
PMEL-213ENST00000549564 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
PMEL-213ENST00000549564 EHBP1L1Q8N3D4 1523 aa20.17■□□□□ 0.82
PMEL-213ENST00000549564 NCOA2Q15596 1464 aa20.15■□□□□ 0.82
PMEL-213ENST00000549564 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
PMEL-213ENST00000549564 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
PMEL-213ENST00000549564 UBAP1LF5GYI3 381 aa20.14■□□□□ 0.81
PMEL-213ENST00000549564 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
PMEL-213ENST00000549564 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
PMEL-213ENST00000549564 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms