RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PTPRGP23470 1445 aa14.72□□□□□ -0.05
RAB5B-206ENST00000549505 CAMSAP2Q08AD1 1489 aa14.71□□□□□ -0.05
RAB5B-206ENST00000549505 PREX2Q70Z35 1606 aa14.71□□□□□ -0.05
RAB5B-206ENST00000549505 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.05
RAB5B-206ENST00000549505 DENND4BO75064 1496 aaPredicted RBP14.7□□□□□ -0.06
RAB5B-206ENST00000549505 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
RAB5B-206ENST00000549505 KDM6BO15054 1643 aa14.66□□□□□ -0.06
RAB5B-206ENST00000549505 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
RAB5B-206ENST00000549505 ERCC6L2Q5T890 1561 aa14.66□□□□□ -0.06
RAB5B-206ENST00000549505 KDM5DQ9BY66 1539 aa14.65□□□□□ -0.06
RAB5B-206ENST00000549505 CDC42BPBQ9Y5S2 1711 aa14.65□□□□□ -0.06
RAB5B-206ENST00000549505 FBLN2P98095 1184 aa14.62□□□□□ -0.07
RAB5B-206ENST00000549505 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
RAB5B-206ENST00000549505 MBD5Q9P267 1494 aa14.62□□□□□ -0.07
RAB5B-206ENST00000549505 NCOA1Q15788 1441 aa14.62□□□□□ -0.07
RAB5B-206ENST00000549505 SAMD9LQ8IVG5 1584 aa14.61□□□□□ -0.07
RAB5B-206ENST00000549505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.07
RAB5B-206ENST00000549505 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
RAB5B-206ENST00000549505 ITGAEP38570 1179 aa14.59□□□□□ -0.07
RAB5B-206ENST00000549505 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
RAB5B-206ENST00000549505 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.07
RAB5B-206ENST00000549505 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
RAB5B-206ENST00000549505 PLXNC1O60486 1568 aa14.58□□□□□ -0.08
RAB5B-206ENST00000549505 TTC37Q6PGP7 1564 aa14.57□□□□□ -0.08
RAB5B-206ENST00000549505 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
RAB5B-206ENST00000549505 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
RAB5B-206ENST00000549505 PZPP20742 1482 aa14.54□□□□□ -0.08
RAB5B-206ENST00000549505 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
RAB5B-206ENST00000549505 CCDC141Q6ZP82 1450 aa14.53□□□□□ -0.08
RAB5B-206ENST00000549505 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.08
RAB5B-206ENST00000549505 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.09
RAB5B-206ENST00000549505 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
RAB5B-206ENST00000549505 UNC13BO14795 1591 aa14.51□□□□□ -0.09
RAB5B-206ENST00000549505 ANKRD30BQ9BXX2 1392 aa14.51□□□□□ -0.09
RAB5B-206ENST00000549505 C9orf84Q5VXU9 1444 aa14.51□□□□□ -0.09
RAB5B-206ENST00000549505 ZNF644Q9H582 1327 aaPredicted RBP14.51□□□□□ -0.09
RAB5B-206ENST00000549505 PLCH2O75038 1416 aa14.5□□□□□ -0.09
RAB5B-206ENST00000549505 RPRD2Q5VT52 1461 aaKnown RBP14.5□□□□□ -0.09
RAB5B-206ENST00000549505 ABCA9Q8IUA7 1624 aa14.5□□□□□ -0.09
RAB5B-206ENST00000549505 MAGI2Q86UL8 1455 aa14.49□□□□□ -0.09
RAB5B-206ENST00000549505 ABCC1P33527 1531 aa14.48□□□□□ -0.09
RAB5B-206ENST00000549505 TEX14Q8IWB6 1497 aa14.47□□□□□ -0.09
RAB5B-206ENST00000549505 MPHOSPH9Q99550 1183 aa14.46□□□□□ -0.1
RAB5B-206ENST00000549505 ANKRD50Q9ULJ7 1429 aa14.45□□□□□ -0.1
RAB5B-206ENST00000549505 WDR7Q9Y4E6 1490 aa14.45□□□□□ -0.1
RAB5B-206ENST00000549505 SIN3AQ96ST3 1273 aa14.44□□□□□ -0.1
RAB5B-206ENST00000549505 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
RAB5B-206ENST00000549505 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
RAB5B-206ENST00000549505 RTEL1-TNFRSF6BF6WH68 1400 aa14.43□□□□□ -0.1
RAB5B-206ENST00000549505 IQGAP3Q86VI3 1631 aa14.42□□□□□ -0.1
RAB5B-206ENST00000549505 ARHGAP5Q13017 1502 aa14.42□□□□□ -0.1
RAB5B-206ENST00000549505 DUOX2Q9NRD8 1548 aa14.42□□□□□ -0.1
RAB5B-206ENST00000549505 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
RAB5B-206ENST00000549505 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
RAB5B-206ENST00000549505 TONSLQ96HA7 1378 aa14.41□□□□□ -0.1
RAB5B-206ENST00000549505 ERBINQ96RT1 1412 aa14.41□□□□□ -0.1
RAB5B-206ENST00000549505 ATP10AO60312 1499 aa14.4□□□□□ -0.1
RAB5B-206ENST00000549505 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
RAB5B-206ENST00000549505 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
RAB5B-206ENST00000549505 INO80Q9ULG1 1556 aaPredicted RBP14.38□□□□□ -0.11
RAB5B-206ENST00000549505 UHRF1BP1Q6BDS2 1440 aa14.37□□□□□ -0.11
RAB5B-206ENST00000549505 KIF15Q9NS87 1388 aa14.37□□□□□ -0.11
RAB5B-206ENST00000549505 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
RAB5B-206ENST00000549505 CFAP74Q9C0B2 1584 aa14.36□□□□□ -0.11
RAB5B-206ENST00000549505 EIF2AK4Q9P2K8 1649 aaKnown RBP14.36□□□□□ -0.11
RAB5B-206ENST00000549505 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
RAB5B-206ENST00000549505 FAM135AQ9P2D6 1515 aa14.35□□□□□ -0.11
RAB5B-206ENST00000549505 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
RAB5B-206ENST00000549505 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
RAB5B-206ENST00000549505 BCORL1Q5H9F3 1711 aa14.34□□□□□ -0.11
RAB5B-206ENST00000549505 TSPY4P0CV99 314 aa14.33□□□□□ -0.12
RAB5B-206ENST00000549505 TSPY10P0CW01 314 aa14.33□□□□□ -0.12
RAB5B-206ENST00000549505 SPATA31E1Q6ZUB1 1445 aa14.31□□□□□ -0.12
RAB5B-206ENST00000549505 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
RAB5B-206ENST00000549505 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
RAB5B-206ENST00000549505 EFCAB2Q5VUJ9 269 aa14.3□□□□□ -0.12
RAB5B-206ENST00000549505 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
RAB5B-206ENST00000549505 LAMC1P11047 1609 aa14.29□□□□□ -0.12
RAB5B-206ENST00000549505 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
RAB5B-206ENST00000549505 KDM5CP41229 1560 aa14.28□□□□□ -0.12
RAB5B-206ENST00000549505 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAB5B-206ENST00000549505 MIER1Q8N108 512 aa14.28□□□□□ -0.12
RAB5B-206ENST00000549505 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.12
RAB5B-206ENST00000549505 GLI2P10070 1586 aa14.27□□□□□ -0.12
RAB5B-206ENST00000549505 TRAPPC8Q9Y2L5 1435 aa14.27□□□□□ -0.13
RAB5B-206ENST00000549505 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
RAB5B-206ENST00000549505 FANCAO15360 1455 aa14.26□□□□□ -0.13
RAB5B-206ENST00000549505 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
RAB5B-206ENST00000549505 ATP7AQ04656 1500 aa14.26□□□□□ -0.13
RAB5B-206ENST00000549505 PRDM15P57071 1507 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-206ENST00000549505 NUP155O75694 1391 aa14.24□□□□□ -0.13
RAB5B-206ENST00000549505 RNF17Q9BXT8 1623 aaKnown RBP14.24□□□□□ -0.13
RAB5B-206ENST00000549505 LMTK2Q8IWU2 1503 aa14.24□□□□□ -0.13
RAB5B-206ENST00000549505 PLA2R1Q13018 1463 aa14.24□□□□□ -0.13
RAB5B-206ENST00000549505 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
RAB5B-206ENST00000549505 TET3O43151 1660 aa14.23□□□□□ -0.13
RAB5B-206ENST00000549505 MROH1Q8NDA8 1641 aa14.23□□□□□ -0.13
RAB5B-206ENST00000549505 MAP3K4Q9Y6R4 1608 aa14.22□□□□□ -0.13
RAB5B-206ENST00000549505 NEO1Q92859 1461 aa14.22□□□□□ -0.13
RAB5B-206ENST00000549505 PTPRTO14522 1441 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms