RNA–Protein interactions for RNA: ENST00000549415.1

USP15-214, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-214ENST00000549415 NLRP6P59044 892 aa12.07□□□□□ -0.48
USP15-214ENST00000549415 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
USP15-214ENST00000549415 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
USP15-214ENST00000549415 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
USP15-214ENST00000549415 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
USP15-214ENST00000549415 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
USP15-214ENST00000549415 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
USP15-214ENST00000549415 POTEMA6NI47 508 aa12.02□□□□□ -0.49
USP15-214ENST00000549415 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
USP15-214ENST00000549415 CUX2O14529 1486 aa12.02□□□□□ -0.49
USP15-214ENST00000549415 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
USP15-214ENST00000549415 SMARCA2P51531 1590 aa12□□□□□ -0.49
USP15-214ENST00000549415 ST18O60284 1047 aa11.99□□□□□ -0.49
USP15-214ENST00000549415 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
USP15-214ENST00000549415 NESP48681 1621 aa11.97□□□□□ -0.49
USP15-214ENST00000549415 TMEM92Q6UXU6 159 aa11.97□□□□□ -0.49
USP15-214ENST00000549415 SNPHO15079 494 aa11.95□□□□□ -0.5
USP15-214ENST00000549415 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
USP15-214ENST00000549415 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
USP15-214ENST00000549415 PPP1R37O75864 691 aa11.92□□□□□ -0.5
USP15-214ENST00000549415 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
USP15-214ENST00000549415 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
USP15-214ENST00000549415 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
USP15-214ENST00000549415 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
USP15-214ENST00000549415 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
USP15-214ENST00000549415 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
USP15-214ENST00000549415 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
USP15-214ENST00000549415 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
USP15-214ENST00000549415 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
USP15-214ENST00000549415 C2orf72A6NCS6 295 aa11.79□□□□□ -0.52
USP15-214ENST00000549415 KIF3CO14782 793 aa11.79□□□□□ -0.52
USP15-214ENST00000549415 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
USP15-214ENST00000549415 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
USP15-214ENST00000549415 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
USP15-214ENST00000549415 EMP3P54852 163 aa11.76□□□□□ -0.53
USP15-214ENST00000549415 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
USP15-214ENST00000549415 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
USP15-214ENST00000549415 WIZO95785 1651 aa11.74□□□□□ -0.53
USP15-214ENST00000549415 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
USP15-214ENST00000549415 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
USP15-214ENST00000549415 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
USP15-214ENST00000549415 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
USP15-214ENST00000549415 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
USP15-214ENST00000549415 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
USP15-214ENST00000549415 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
USP15-214ENST00000549415 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
USP15-214ENST00000549415 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
USP15-214ENST00000549415 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
USP15-214ENST00000549415 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
USP15-214ENST00000549415 GPR153Q6NV75 609 aa11.68□□□□□ -0.54
USP15-214ENST00000549415 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
USP15-214ENST00000549415 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
USP15-214ENST00000549415 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
USP15-214ENST00000549415 ARSIQ5FYB1 569 aa11.66□□□□□ -0.54
USP15-214ENST00000549415 WDR62O43379 1518 aa11.65□□□□□ -0.54
USP15-214ENST00000549415 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.548e-7■■■□□ 17.4
USP15-214ENST00000549415 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
USP15-214ENST00000549415 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
USP15-214ENST00000549415 ERBB3P21860 1342 aa11.61□□□□□ -0.55
USP15-214ENST00000549415 DSG2Q14126 1118 aa11.61□□□□□ -0.55
USP15-214ENST00000549415 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
USP15-214ENST00000549415 FOXK1P85037 733 aa11.6□□□□□ -0.55
USP15-214ENST00000549415 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
USP15-214ENST00000549415 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
USP15-214ENST00000549415 SLC34A2O95436 690 aa11.58□□□□□ -0.56
USP15-214ENST00000549415 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
USP15-214ENST00000549415 NCKAP5LQ9HCH0 1330 aa11.58□□□□□ -0.56
USP15-214ENST00000549415 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
USP15-214ENST00000549415 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
USP15-214ENST00000549415 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
USP15-214ENST00000549415 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
USP15-214ENST00000549415 NUDT7P0C024 238 aa11.55□□□□□ -0.56
USP15-214ENST00000549415 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
USP15-214ENST00000549415 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
USP15-214ENST00000549415 CFTRP13569 1480 aa11.54□□□□□ -0.56
USP15-214ENST00000549415 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
USP15-214ENST00000549415 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
USP15-214ENST00000549415 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
USP15-214ENST00000549415 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
USP15-214ENST00000549415 PDE4AP27815 886 aa11.5□□□□□ -0.57
USP15-214ENST00000549415 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
USP15-214ENST00000549415 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
USP15-214ENST00000549415 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
USP15-214ENST00000549415 PRDM2Q13029 1718 aa11.46□□□□□ -0.57
USP15-214ENST00000549415 KDM4FA0A1W2PPD8 638 aa11.46□□□□□ -0.57
USP15-214ENST00000549415 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
USP15-214ENST00000549415 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
USP15-214ENST00000549415 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
USP15-214ENST00000549415 UPF1Q92900 1129 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP15-214ENST00000549415 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
USP15-214ENST00000549415 MFSD10Q14728 455 aa11.44□□□□□ -0.58
USP15-214ENST00000549415 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
USP15-214ENST00000549415 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
USP15-214ENST00000549415 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
USP15-214ENST00000549415 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
USP15-214ENST00000549415 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
USP15-214ENST00000549415 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.58
USP15-214ENST00000549415 TBC1D12O60347 775 aa11.4□□□□□ -0.58
USP15-214ENST00000549415 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
USP15-214ENST00000549415 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms