RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CUL7Q14999 1698 aa12.09□□□□□ -0.47
PPFIA2-216ENST00000549396 BICRAQ9NZM4 1560 aa12.09□□□□□ -0.47
PPFIA2-216ENST00000549396 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
PPFIA2-216ENST00000549396 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
PPFIA2-216ENST00000549396 GGT6Q6P531 493 aa12.08□□□□□ -0.48
PPFIA2-216ENST00000549396 RAD54L2Q9Y4B4 1467 aa12.07□□□□□ -0.48
PPFIA2-216ENST00000549396 ANP32BQ92688 251 aaKnown RBP12.07□□□□□ -0.48
PPFIA2-216ENST00000549396 RALBP1Q15311 655 aa12.07□□□□□ -0.48
PPFIA2-216ENST00000549396 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
PPFIA2-216ENST00000549396 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
PPFIA2-216ENST00000549396 HECW1Q76N89 1606 aa12.06□□□□□ -0.48
PPFIA2-216ENST00000549396 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
PPFIA2-216ENST00000549396 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
PPFIA2-216ENST00000549396 EHBP1L1Q8N3D4 1523 aa12.05□□□□□ -0.48
PPFIA2-216ENST00000549396 KIF3BO15066 747 aa12.05□□□□□ -0.48
PPFIA2-216ENST00000549396 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
PPFIA2-216ENST00000549396 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
PPFIA2-216ENST00000549396 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
PPFIA2-216ENST00000549396 CCDC144AA2RUR9 1427 aa12.04□□□□□ -0.48
PPFIA2-216ENST00000549396 TERF2IPQ9NYB0 399 aa12.04□□□□□ -0.48
PPFIA2-216ENST00000549396 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
PPFIA2-216ENST00000549396 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
PPFIA2-216ENST00000549396 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
PPFIA2-216ENST00000549396 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.48
PPFIA2-216ENST00000549396 FKBP8Q14318 412 aa12.02□□□□□ -0.48
PPFIA2-216ENST00000549396 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
PPFIA2-216ENST00000549396 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
PPFIA2-216ENST00000549396 HDAC5Q9UQL6 1122 aa12.02□□□□□ -0.49
PPFIA2-216ENST00000549396 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
PPFIA2-216ENST00000549396 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
PPFIA2-216ENST00000549396 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
PPFIA2-216ENST00000549396 KIAA0586Q9BVV6 1533 aa12□□□□□ -0.49
PPFIA2-216ENST00000549396 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.49
PPFIA2-216ENST00000549396 PRXQ9BXM0 1461 aa12□□□□□ -0.49
PPFIA2-216ENST00000549396 FGD6Q6ZV73 1430 aa11.99□□□□□ -0.49
PPFIA2-216ENST00000549396 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
PPFIA2-216ENST00000549396 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
PPFIA2-216ENST00000549396 BECN1Q14457 450 aa11.99□□□□□ -0.49
PPFIA2-216ENST00000549396 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
PPFIA2-216ENST00000549396 MLECQ14165 292 aa11.99□□□□□ -0.49
PPFIA2-216ENST00000549396 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
PPFIA2-216ENST00000549396 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
PPFIA2-216ENST00000549396 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
PPFIA2-216ENST00000549396 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
PPFIA2-216ENST00000549396 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
PPFIA2-216ENST00000549396 LMOD3Q0VAK6 560 aa11.97□□□□□ -0.49
PPFIA2-216ENST00000549396 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
PPFIA2-216ENST00000549396 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.49
PPFIA2-216ENST00000549396 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
PPFIA2-216ENST00000549396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.5
PPFIA2-216ENST00000549396 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-216ENST00000549396 IPO8O15397 1037 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-216ENST00000549396 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
PPFIA2-216ENST00000549396 ARHGAP5Q13017 1502 aa11.94□□□□□ -0.5
PPFIA2-216ENST00000549396 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-216ENST00000549396 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
PPFIA2-216ENST00000549396 TROQ12816 1431 aaPredicted RBP11.93□□□□□ -0.5
PPFIA2-216ENST00000549396 POGZQ7Z3K3 1410 aa11.93□□□□□ -0.5
PPFIA2-216ENST00000549396 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
PPFIA2-216ENST00000549396 HFM1A2PYH4 1435 aa11.92□□□□□ -0.5
PPFIA2-216ENST00000549396 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
PPFIA2-216ENST00000549396 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
PPFIA2-216ENST00000549396 MIER1Q8N108 512 aa11.92□□□□□ -0.5
PPFIA2-216ENST00000549396 RRBP1Q9P2E9 1410 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-216ENST00000549396 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
PPFIA2-216ENST00000549396 LMOD2Q6P5Q4 547 aa11.91□□□□□ -0.5
PPFIA2-216ENST00000549396 KIF15Q9NS87 1388 aa11.91□□□□□ -0.5
PPFIA2-216ENST00000549396 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
PPFIA2-216ENST00000549396 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
PPFIA2-216ENST00000549396 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-216ENST00000549396 NESP48681 1621 aa11.9□□□□□ -0.5
PPFIA2-216ENST00000549396 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
PPFIA2-216ENST00000549396 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
PPFIA2-216ENST00000549396 A0A0G2JS52 829 aa11.89□□□□□ -0.51
PPFIA2-216ENST00000549396 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
PPFIA2-216ENST00000549396 SUPT6HQ7KZ85 1726 aaKnown RBP11.89□□□□□ -0.51
PPFIA2-216ENST00000549396 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
PPFIA2-216ENST00000549396 GOLGA6L22H0YM25 854 aa11.88□□□□□ -0.51
PPFIA2-216ENST00000549396 FAM69CQ0P6D2 419 aa11.88□□□□□ -0.51
PPFIA2-216ENST00000549396 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
PPFIA2-216ENST00000549396 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
PPFIA2-216ENST00000549396 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
PPFIA2-216ENST00000549396 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
PPFIA2-216ENST00000549396 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
PPFIA2-216ENST00000549396 DHX57Q6P158 1386 aaKnown RBP11.85□□□□□ -0.51
PPFIA2-216ENST00000549396 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
PPFIA2-216ENST00000549396 UNC13AQ9UPW8 1703 aa11.85□□□□□ -0.51
PPFIA2-216ENST00000549396 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
PPFIA2-216ENST00000549396 L3MBTL2Q969R5 705 aa11.84□□□□□ -0.51
PPFIA2-216ENST00000549396 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
PPFIA2-216ENST00000549396 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
PPFIA2-216ENST00000549396 STK26Q9P289 416 aa11.83□□□□□ -0.52
PPFIA2-216ENST00000549396 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
PPFIA2-216ENST00000549396 RPGRIP1LQ68CZ1 1315 aa11.82□□□□□ -0.52
PPFIA2-216ENST00000549396 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
PPFIA2-216ENST00000549396 ROCK1Q13464 1354 aa11.82□□□□□ -0.52
PPFIA2-216ENST00000549396 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
PPFIA2-216ENST00000549396 NPHP1O15259 732 aa11.82□□□□□ -0.52
PPFIA2-216ENST00000549396 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
PPFIA2-216ENST00000549396 HMGB2P26583 209 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms