RNA–Protein interactions for RNA: ENST00000549209.5

SMARCC2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-206ENST00000549209 EFCAB2Q5VUJ9 269 aa13.4□□□□□ -0.26
SMARCC2-206ENST00000549209 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
SMARCC2-206ENST00000549209 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
SMARCC2-206ENST00000549209 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
SMARCC2-206ENST00000549209 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
SMARCC2-206ENST00000549209 CFAP74Q9C0B2 1584 aa13.37□□□□□ -0.27
SMARCC2-206ENST00000549209 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
SMARCC2-206ENST00000549209 ZMYM4Q5VZL5 1548 aa13.37□□□□□ -0.27
SMARCC2-206ENST00000549209 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
SMARCC2-206ENST00000549209 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
SMARCC2-206ENST00000549209 ARHGEF12Q9NZN5 1544 aa13.35□□□□□ -0.27
SMARCC2-206ENST00000549209 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
SMARCC2-206ENST00000549209 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
SMARCC2-206ENST00000549209 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
SMARCC2-206ENST00000549209 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
SMARCC2-206ENST00000549209 MTUS2Q5JR59 1369 aa13.33□□□□□ -0.27
SMARCC2-206ENST00000549209 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.27
SMARCC2-206ENST00000549209 YEATS2Q9ULM3 1422 aa13.33□□□□□ -0.28
SMARCC2-206ENST00000549209 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
SMARCC2-206ENST00000549209 AFAP1Q8N556 730 aa13.32□□□□□ -0.28
SMARCC2-206ENST00000549209 MAP3K1Q13233 1512 aa13.32□□□□□ -0.28
SMARCC2-206ENST00000549209 ARHGEF40Q8TER5 1519 aa13.32□□□□□ -0.28
SMARCC2-206ENST00000549209 TRAPPC8Q9Y2L5 1435 aa13.31□□□□□ -0.28
SMARCC2-206ENST00000549209 ABCC1P33527 1531 aa13.31□□□□□ -0.28
SMARCC2-206ENST00000549209 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
SMARCC2-206ENST00000549209 KDM5CP41229 1560 aa13.31□□□□□ -0.28
SMARCC2-206ENST00000549209 TIAM1Q13009 1591 aa13.31□□□□□ -0.28
SMARCC2-206ENST00000549209 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
SMARCC2-206ENST00000549209 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
SMARCC2-206ENST00000549209 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
SMARCC2-206ENST00000549209 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
SMARCC2-206ENST00000549209 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
SMARCC2-206ENST00000549209 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
SMARCC2-206ENST00000549209 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
SMARCC2-206ENST00000549209 NCOA2Q15596 1464 aa13.28□□□□□ -0.28
SMARCC2-206ENST00000549209 ZFYVE16Q7Z3T8 1539 aa13.28□□□□□ -0.28
SMARCC2-206ENST00000549209 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
SMARCC2-206ENST00000549209 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.29
SMARCC2-206ENST00000549209 SIGLEC1Q9BZZ2 1709 aa13.26□□□□□ -0.29
SMARCC2-206ENST00000549209 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
SMARCC2-206ENST00000549209 ATP10AO60312 1499 aa13.25□□□□□ -0.29
SMARCC2-206ENST00000549209 MBD5Q9P267 1494 aa13.25□□□□□ -0.29
SMARCC2-206ENST00000549209 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMARCC2-206ENST00000549209 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
SMARCC2-206ENST00000549209 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
SMARCC2-206ENST00000549209 ITSN2Q9NZM3 1697 aa13.23□□□□□ -0.29
SMARCC2-206ENST00000549209 SYCP2Q9BX26 1530 aa13.23□□□□□ -0.29
SMARCC2-206ENST00000549209 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
SMARCC2-206ENST00000549209 C9orf84Q5VXU9 1444 aa13.22□□□□□ -0.29
SMARCC2-206ENST00000549209 DIP2CQ9Y2E4 1556 aa13.21□□□□□ -0.29
SMARCC2-206ENST00000549209 KCNA4P22459 653 aa13.21□□□□□ -0.29
SMARCC2-206ENST00000549209 HECW2Q9P2P5 1572 aa13.2□□□□□ -0.3
SMARCC2-206ENST00000549209 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
SMARCC2-206ENST00000549209 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
SMARCC2-206ENST00000549209 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
SMARCC2-206ENST00000549209 ARID4BQ4LE39 1312 aaPredicted RBP13.18□□□□□ -0.3
SMARCC2-206ENST00000549209 PTPRMP28827 1452 aa13.18□□□□□ -0.3
SMARCC2-206ENST00000549209 ABCA6Q8N139 1617 aa13.18□□□□□ -0.3
SMARCC2-206ENST00000549209 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
SMARCC2-206ENST00000549209 SPAG9O60271 1321 aaKnown RBP13.17□□□□□ -0.3
SMARCC2-206ENST00000549209 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
SMARCC2-206ENST00000549209 AGLP35573 1532 aa13.17□□□□□ -0.3
SMARCC2-206ENST00000549209 INO80Q9ULG1 1556 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-206ENST00000549209 MYOM3Q5VTT5 1437 aa13.16□□□□□ -0.3
SMARCC2-206ENST00000549209 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
SMARCC2-206ENST00000549209 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
SMARCC2-206ENST00000549209 MADDQ8WXG6 1647 aa13.15□□□□□ -0.3
SMARCC2-206ENST00000549209 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
SMARCC2-206ENST00000549209 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
SMARCC2-206ENST00000549209 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
SMARCC2-206ENST00000549209 PLXNC1O60486 1568 aa13.12□□□□□ -0.31
SMARCC2-206ENST00000549209 CCDC141Q6ZP82 1450 aa13.12□□□□□ -0.31
SMARCC2-206ENST00000549209 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
SMARCC2-206ENST00000549209 APLP2Q06481 763 aa13.11□□□□□ -0.31
SMARCC2-206ENST00000549209 MLECQ14165 292 aa13.11□□□□□ -0.31
SMARCC2-206ENST00000549209 A2MP01023 1474 aa13.1□□□□□ -0.31
SMARCC2-206ENST00000549209 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
SMARCC2-206ENST00000549209 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
SMARCC2-206ENST00000549209 TCOF1Q13428 1488 aaKnown RBP13.08□□□□□ -0.32
SMARCC2-206ENST00000549209 DHX29Q7Z478 1369 aaKnown RBP13.07□□□□□ -0.32
SMARCC2-206ENST00000549209 ABCC5O15440 1437 aa13.06□□□□□ -0.32
SMARCC2-206ENST00000549209 RIMS1Q86UR5 1692 aaKnown RBP13.06□□□□□ -0.32
SMARCC2-206ENST00000549209 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
SMARCC2-206ENST00000549209 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-206ENST00000549209 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
SMARCC2-206ENST00000549209 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
SMARCC2-206ENST00000549209 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
SMARCC2-206ENST00000549209 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
SMARCC2-206ENST00000549209 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
SMARCC2-206ENST00000549209 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
SMARCC2-206ENST00000549209 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.32
SMARCC2-206ENST00000549209 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.33
SMARCC2-206ENST00000549209 DAPK1P53355 1430 aa13.01□□□□□ -0.33
SMARCC2-206ENST00000549209 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
SMARCC2-206ENST00000549209 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
SMARCC2-206ENST00000549209 KIF3BO15066 747 aa12.98□□□□□ -0.33
SMARCC2-206ENST00000549209 GGT6Q6P531 493 aa12.98□□□□□ -0.33
SMARCC2-206ENST00000549209 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
SMARCC2-206ENST00000549209 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
SMARCC2-206ENST00000549209 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms