RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 DNMT1P26358 1616 aaKnown RBP16.75■□□□□ 0.27
PTPRR-208ENST00000549107 TTC37Q6PGP7 1564 aa16.74■□□□□ 0.27
PTPRR-208ENST00000549107 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
PTPRR-208ENST00000549107 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
PTPRR-208ENST00000549107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPRR-208ENST00000549107 ZNF644Q9H582 1327 aaPredicted RBP16.72■□□□□ 0.27
PTPRR-208ENST00000549107 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
PTPRR-208ENST00000549107 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
PTPRR-208ENST00000549107 DAPK1P53355 1430 aa16.71■□□□□ 0.27
PTPRR-208ENST00000549107 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
PTPRR-208ENST00000549107 ABCC5O15440 1437 aa16.7■□□□□ 0.26
PTPRR-208ENST00000549107 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
PTPRR-208ENST00000549107 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
PTPRR-208ENST00000549107 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
PTPRR-208ENST00000549107 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
PTPRR-208ENST00000549107 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
PTPRR-208ENST00000549107 NAIPQ13075 1403 aa16.68■□□□□ 0.26
PTPRR-208ENST00000549107 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
PTPRR-208ENST00000549107 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
PTPRR-208ENST00000549107 MSH5O43196 834 aa16.65■□□□□ 0.26
PTPRR-208ENST00000549107 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
PTPRR-208ENST00000549107 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
PTPRR-208ENST00000549107 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
PTPRR-208ENST00000549107 ROCK1Q13464 1354 aa16.64■□□□□ 0.26
PTPRR-208ENST00000549107 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
PTPRR-208ENST00000549107 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
PTPRR-208ENST00000549107 ASXL2Q76L83 1435 aa16.63■□□□□ 0.25
PTPRR-208ENST00000549107 ARHGEF5Q12774 1597 aa16.63■□□□□ 0.25
PTPRR-208ENST00000549107 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
PTPRR-208ENST00000549107 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
PTPRR-208ENST00000549107 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
PTPRR-208ENST00000549107 PLCH2O75038 1416 aa16.61■□□□□ 0.25
PTPRR-208ENST00000549107 ADGRL2O95490 1459 aa16.61■□□□□ 0.25
PTPRR-208ENST00000549107 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
PTPRR-208ENST00000549107 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
PTPRR-208ENST00000549107 MBD5Q9P267 1494 aa16.59■□□□□ 0.25
PTPRR-208ENST00000549107 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
PTPRR-208ENST00000549107 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
PTPRR-208ENST00000549107 KDM6BO15054 1643 aa16.59■□□□□ 0.25
PTPRR-208ENST00000549107 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
PTPRR-208ENST00000549107 PLEKHH2Q8IVE3 1493 aa16.58■□□□□ 0.24
PTPRR-208ENST00000549107 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
PTPRR-208ENST00000549107 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
PTPRR-208ENST00000549107 C9orf84Q5VXU9 1444 aa16.56■□□□□ 0.24
PTPRR-208ENST00000549107 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
PTPRR-208ENST00000549107 KIAA1107Q9UPP5 1409 aa16.55■□□□□ 0.24
PTPRR-208ENST00000549107 HNRNPMP52272 730 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPRR-208ENST00000549107 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
PTPRR-208ENST00000549107 ABCC1P33527 1531 aa16.54■□□□□ 0.24
PTPRR-208ENST00000549107 ANKRD30AQ9BXX3 1397 aa16.53■□□□□ 0.24
PTPRR-208ENST00000549107 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
PTPRR-208ENST00000549107 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.24
PTPRR-208ENST00000549107 RSPH4AQ5TD94 716 aa16.52■□□□□ 0.24
PTPRR-208ENST00000549107 ARHGEF12Q9NZN5 1544 aa16.5■□□□□ 0.23
PTPRR-208ENST00000549107 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
PTPRR-208ENST00000549107 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
PTPRR-208ENST00000549107 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
PTPRR-208ENST00000549107 FANCAO15360 1455 aa16.48■□□□□ 0.23
PTPRR-208ENST00000549107 PLXNC1O60486 1568 aa16.46■□□□□ 0.23
PTPRR-208ENST00000549107 KIF15Q9NS87 1388 aa16.45■□□□□ 0.22
PTPRR-208ENST00000549107 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
PTPRR-208ENST00000549107 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
PTPRR-208ENST00000549107 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
PTPRR-208ENST00000549107 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
PTPRR-208ENST00000549107 DENND4BO75064 1496 aaPredicted RBP16.42■□□□□ 0.22
PTPRR-208ENST00000549107 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
PTPRR-208ENST00000549107 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
PTPRR-208ENST00000549107 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
PTPRR-208ENST00000549107 GLI2P10070 1586 aa16.4■□□□□ 0.22
PTPRR-208ENST00000549107 MAP3K4Q9Y6R4 1608 aa16.39■□□□□ 0.21
PTPRR-208ENST00000549107 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
PTPRR-208ENST00000549107 PZPP20742 1482 aa16.39■□□□□ 0.21
PTPRR-208ENST00000549107 ZFYVE16Q7Z3T8 1539 aa16.39■□□□□ 0.21
PTPRR-208ENST00000549107 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
PTPRR-208ENST00000549107 SCAPERQ9BY12 1400 aa16.37■□□□□ 0.21
PTPRR-208ENST00000549107 KDM5DQ9BY66 1539 aa16.37■□□□□ 0.21
PTPRR-208ENST00000549107 DUOX2Q9NRD8 1548 aa16.37■□□□□ 0.21
PTPRR-208ENST00000549107 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
PTPRR-208ENST00000549107 RTEL1-TNFRSF6BF6WH68 1400 aa16.36■□□□□ 0.21
PTPRR-208ENST00000549107 ADRA2BP18089 450 aa16.36■□□□□ 0.21
PTPRR-208ENST00000549107 DIP2BQ9P265 1576 aa16.35■□□□□ 0.21
PTPRR-208ENST00000549107 SPAG9O60271 1321 aaKnown RBP16.35■□□□□ 0.21
PTPRR-208ENST00000549107 ATP7AQ04656 1500 aa16.35■□□□□ 0.21
PTPRR-208ENST00000549107 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
PTPRR-208ENST00000549107 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
PTPRR-208ENST00000549107 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
PTPRR-208ENST00000549107 NEO1Q92859 1461 aa16.34■□□□□ 0.21
PTPRR-208ENST00000549107 UNC13BO14795 1591 aa16.34■□□□□ 0.21
PTPRR-208ENST00000549107 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
PTPRR-208ENST00000549107 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
PTPRR-208ENST00000549107 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
PTPRR-208ENST00000549107 ZNF518AQ6AHZ1 1483 aa16.31■□□□□ 0.2
PTPRR-208ENST00000549107 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
PTPRR-208ENST00000549107 NUP155O75694 1391 aa16.3■□□□□ 0.2
PTPRR-208ENST00000549107 KDM5CP41229 1560 aa16.3■□□□□ 0.2
PTPRR-208ENST00000549107 ANKRD30BQ9BXX2 1392 aa16.28■□□□□ 0.2
PTPRR-208ENST00000549107 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
PTPRR-208ENST00000549107 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
PTPRR-208ENST00000549107 TONSLQ96HA7 1378 aa16.27■□□□□ 0.2
PTPRR-208ENST00000549107 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms