RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DENND4BO75064 1496 aaPredicted RBP18.94■□□□□ 0.62
HDAC7-228ENST00000548938 CNTLNQ9NXG0 1405 aa18.94■□□□□ 0.62
HDAC7-228ENST00000548938 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
HDAC7-228ENST00000548938 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
HDAC7-228ENST00000548938 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
HDAC7-228ENST00000548938 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
HDAC7-228ENST00000548938 ERICH6BQ5W0A0 696 aa18.93■□□□□ 0.62
HDAC7-228ENST00000548938 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
HDAC7-228ENST00000548938 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
HDAC7-228ENST00000548938 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.623e-7■■■■□ 21.1
HDAC7-228ENST00000548938 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
HDAC7-228ENST00000548938 CHIC2Q9UKJ5 165 aa18.91■□□□□ 0.62
HDAC7-228ENST00000548938 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
HDAC7-228ENST00000548938 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
HDAC7-228ENST00000548938 KDM6BO15054 1643 aa18.88■□□□□ 0.61
HDAC7-228ENST00000548938 GCC2Q8IWJ2 1684 aa18.88■□□□□ 0.61
HDAC7-228ENST00000548938 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
HDAC7-228ENST00000548938 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
HDAC7-228ENST00000548938 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
HDAC7-228ENST00000548938 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
HDAC7-228ENST00000548938 NUP153P49790 1475 aaKnown RBP18.86■□□□□ 0.61
HDAC7-228ENST00000548938 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
HDAC7-228ENST00000548938 CCDC7Q96M83 1385 aa18.86■□□□□ 0.61
HDAC7-228ENST00000548938 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
HDAC7-228ENST00000548938 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
HDAC7-228ENST00000548938 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
HDAC7-228ENST00000548938 ZBED9Q6R2W3 1325 aa18.83■□□□□ 0.61
HDAC7-228ENST00000548938 RAPGEF6Q8TEU7 1601 aa18.83■□□□□ 0.61
HDAC7-228ENST00000548938 TCOF1Q13428 1488 aaKnown RBP18.83■□□□□ 0.6
HDAC7-228ENST00000548938 PLB1Q6P1J6 1458 aa18.83■□□□□ 0.6
HDAC7-228ENST00000548938 FOXD1Q16676 465 aa18.82■□□□□ 0.6
HDAC7-228ENST00000548938 CHD1O14646 1710 aa18.81■□□□□ 0.6
HDAC7-228ENST00000548938 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
HDAC7-228ENST00000548938 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
HDAC7-228ENST00000548938 PRG4Q92954 1404 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-228ENST00000548938 NBPF8Q3BBV2 869 aa18.76■□□□□ 0.59
HDAC7-228ENST00000548938 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
HDAC7-228ENST00000548938 TEX14Q8IWB6 1497 aa18.73■□□□□ 0.59
HDAC7-228ENST00000548938 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
HDAC7-228ENST00000548938 ABCA8O94911 1581 aa18.71■□□□□ 0.59
HDAC7-228ENST00000548938 SPATA31E1Q6ZUB1 1445 aa18.7■□□□□ 0.58
HDAC7-228ENST00000548938 ANKRD30BQ9BXX2 1392 aa18.7■□□□□ 0.58
HDAC7-228ENST00000548938 MYT1LQ9UL68 1186 aa18.7■□□□□ 0.58
HDAC7-228ENST00000548938 PTPRGP23470 1445 aa18.7■□□□□ 0.58
HDAC7-228ENST00000548938 DEKP35659 375 aaKnown RBP18.69■□□□□ 0.58
HDAC7-228ENST00000548938 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
HDAC7-228ENST00000548938 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
HDAC7-228ENST00000548938 NOP58Q9Y2X3 529 aaKnown RBP18.68■□□□□ 0.58
HDAC7-228ENST00000548938 POLR1AO95602 1720 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-228ENST00000548938 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
HDAC7-228ENST00000548938 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
HDAC7-228ENST00000548938 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
HDAC7-228ENST00000548938 ATP10BO94823 1461 aa18.65■□□□□ 0.58
HDAC7-228ENST00000548938 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
HDAC7-228ENST00000548938 NBR1Q14596 966 aa18.63■□□□□ 0.57
HDAC7-228ENST00000548938 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
HDAC7-228ENST00000548938 DAPK1P53355 1430 aa18.62■□□□□ 0.57
HDAC7-228ENST00000548938 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
HDAC7-228ENST00000548938 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
HDAC7-228ENST00000548938 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
HDAC7-228ENST00000548938 ROCK1Q13464 1354 aa18.6■□□□□ 0.57
HDAC7-228ENST00000548938 PLEKHD1A6NEE1 506 aa18.6■□□□□ 0.57
HDAC7-228ENST00000548938 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
HDAC7-228ENST00000548938 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
HDAC7-228ENST00000548938 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
HDAC7-228ENST00000548938 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
HDAC7-228ENST00000548938 CCDC136Q96JN2 1154 aa18.59■□□□□ 0.57
HDAC7-228ENST00000548938 KIF14Q15058 1648 aa18.59■□□□□ 0.57
HDAC7-228ENST00000548938 ABCC5O15440 1437 aa18.58■□□□□ 0.57
HDAC7-228ENST00000548938 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
HDAC7-228ENST00000548938 DNMT1P26358 1616 aaKnown RBP18.57■□□□□ 0.56
HDAC7-228ENST00000548938 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
HDAC7-228ENST00000548938 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
HDAC7-228ENST00000548938 BCORL1Q5H9F3 1711 aa18.55■□□□□ 0.56
HDAC7-228ENST00000548938 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-228ENST00000548938 USP47Q96K76 1375 aa18.54■□□□□ 0.56
HDAC7-228ENST00000548938 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
HDAC7-228ENST00000548938 MBD5Q9P267 1494 aa18.53■□□□□ 0.56
HDAC7-228ENST00000548938 PZPP20742 1482 aa18.52■□□□□ 0.56
HDAC7-228ENST00000548938 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
HDAC7-228ENST00000548938 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
HDAC7-228ENST00000548938 ABCC10Q5T3U5 1492 aa18.51■□□□□ 0.55
HDAC7-228ENST00000548938 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
HDAC7-228ENST00000548938 ITSN2Q9NZM3 1697 aa18.49■□□□□ 0.55
HDAC7-228ENST00000548938 ZNF777Q9ULD5 760 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-228ENST00000548938 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
HDAC7-228ENST00000548938 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
HDAC7-228ENST00000548938 KDM5CP41229 1560 aa18.46■□□□□ 0.55
HDAC7-228ENST00000548938 ZBTB47Q9UFB7 747 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-228ENST00000548938 TMC1Q8TDI8 760 aa18.45■□□□□ 0.54
HDAC7-228ENST00000548938 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
HDAC7-228ENST00000548938 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
HDAC7-228ENST00000548938 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
HDAC7-228ENST00000548938 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
HDAC7-228ENST00000548938 PKD2Q13563 968 aa18.4■□□□□ 0.54
HDAC7-228ENST00000548938 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
HDAC7-228ENST00000548938 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.54
HDAC7-228ENST00000548938 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
HDAC7-228ENST00000548938 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
HDAC7-228ENST00000548938 KIF15Q9NS87 1388 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms