RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
RAPGEF3-218ENST00000548919 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
RAPGEF3-218ENST00000548919 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
RAPGEF3-218ENST00000548919 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
RAPGEF3-218ENST00000548919 MRS2Q9HD23 443 aa19.5■□□□□ 0.71
RAPGEF3-218ENST00000548919 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
RAPGEF3-218ENST00000548919 WDR62O43379 1518 aa19.49■□□□□ 0.71
RAPGEF3-218ENST00000548919 ANKRD30BQ9BXX2 1392 aa19.48■□□□□ 0.71
RAPGEF3-218ENST00000548919 DAPK1P53355 1430 aa19.46■□□□□ 0.71
RAPGEF3-218ENST00000548919 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
RAPGEF3-218ENST00000548919 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-218ENST00000548919 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-218ENST00000548919 KIF7Q2M1P5 1343 aa19.45■□□□□ 0.7
RAPGEF3-218ENST00000548919 TEX14Q8IWB6 1497 aa19.44■□□□□ 0.7
RAPGEF3-218ENST00000548919 ADAMTS12P58397 1594 aa19.43■□□□□ 0.7
RAPGEF3-218ENST00000548919 ABCC5O15440 1437 aa19.43■□□□□ 0.7
RAPGEF3-218ENST00000548919 PPP4R2Q9NY27 417 aa19.43■□□□□ 0.7
RAPGEF3-218ENST00000548919 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
RAPGEF3-218ENST00000548919 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
RAPGEF3-218ENST00000548919 ZBED9Q6R2W3 1325 aa19.4■□□□□ 0.7
RAPGEF3-218ENST00000548919 SPATA31E1Q6ZUB1 1445 aa19.4■□□□□ 0.7
RAPGEF3-218ENST00000548919 FANCIQ9NVI1 1328 aa19.39■□□□□ 0.69
RAPGEF3-218ENST00000548919 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
RAPGEF3-218ENST00000548919 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
RAPGEF3-218ENST00000548919 ERICH6BQ5W0A0 696 aa19.37■□□□□ 0.69
RAPGEF3-218ENST00000548919 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
RAPGEF3-218ENST00000548919 SENP3-EIF4A1A0A087X0R7 540 aa19.35■□□□□ 0.69
RAPGEF3-218ENST00000548919 NUP153P49790 1475 aaKnown RBP19.35■□□□□ 0.69
RAPGEF3-218ENST00000548919 BCL11AQ9H165 835 aa19.34■□□□□ 0.69
RAPGEF3-218ENST00000548919 DISP1Q96F81 1524 aa19.33■□□□□ 0.68
RAPGEF3-218ENST00000548919 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF3-218ENST00000548919 POLR1AO95602 1720 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF3-218ENST00000548919 PZPP20742 1482 aa19.31■□□□□ 0.68
RAPGEF3-218ENST00000548919 KIAA0556O60303 1618 aa19.31■□□□□ 0.68
RAPGEF3-218ENST00000548919 ZNF777Q9ULD5 760 aaPredicted RBP19.31■□□□□ 0.68
RAPGEF3-218ENST00000548919 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
RAPGEF3-218ENST00000548919 PRG4Q92954 1404 aaPredicted RBP19.3■□□□□ 0.68
RAPGEF3-218ENST00000548919 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
RAPGEF3-218ENST00000548919 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
RAPGEF3-218ENST00000548919 RAPGEF6Q8TEU7 1601 aa19.28■□□□□ 0.68
RAPGEF3-218ENST00000548919 BCORL1Q5H9F3 1711 aa19.27■□□□□ 0.68
RAPGEF3-218ENST00000548919 CAMSAP2Q08AD1 1489 aa19.27■□□□□ 0.67
RAPGEF3-218ENST00000548919 USP47Q96K76 1375 aa19.27■□□□□ 0.67
RAPGEF3-218ENST00000548919 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
RAPGEF3-218ENST00000548919 PKD2Q13563 968 aa19.25■□□□□ 0.67
RAPGEF3-218ENST00000548919 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
RAPGEF3-218ENST00000548919 MBD5Q9P267 1494 aa19.23■□□□□ 0.67
RAPGEF3-218ENST00000548919 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
RAPGEF3-218ENST00000548919 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
RAPGEF3-218ENST00000548919 SMG6Q86US8 1419 aaKnown RBP19.21■□□□□ 0.67
RAPGEF3-218ENST00000548919 KIF14Q15058 1648 aa19.2■□□□□ 0.66
RAPGEF3-218ENST00000548919 PLB1Q6P1J6 1458 aa19.2■□□□□ 0.66
RAPGEF3-218ENST00000548919 GPATCH8Q9UKJ3 1502 aaKnown RBP19.2■□□□□ 0.66
RAPGEF3-218ENST00000548919 ADGBQ8N7X0 1667 aa19.18■□□□□ 0.66
RAPGEF3-218ENST00000548919 NUDCQ9Y266 331 aa19.18■□□□□ 0.66
RAPGEF3-218ENST00000548919 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
RAPGEF3-218ENST00000548919 KDM5CP41229 1560 aa19.17■□□□□ 0.66
RAPGEF3-218ENST00000548919 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
RAPGEF3-218ENST00000548919 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
RAPGEF3-218ENST00000548919 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
RAPGEF3-218ENST00000548919 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
RAPGEF3-218ENST00000548919 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
RAPGEF3-218ENST00000548919 ANKRD50Q9ULJ7 1429 aa19.14■□□□□ 0.65
RAPGEF3-218ENST00000548919 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
RAPGEF3-218ENST00000548919 CCDC136Q96JN2 1154 aa19.13■□□□□ 0.65
RAPGEF3-218ENST00000548919 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
RAPGEF3-218ENST00000548919 CROCC2H7BZ55 1655 aa19.13■□□□□ 0.65
RAPGEF3-218ENST00000548919 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
RAPGEF3-218ENST00000548919 FBLN2P98095 1184 aa19.12■□□□□ 0.65
RAPGEF3-218ENST00000548919 NUP155O75694 1391 aa19.12■□□□□ 0.65
RAPGEF3-218ENST00000548919 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
RAPGEF3-218ENST00000548919 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
RAPGEF3-218ENST00000548919 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
RAPGEF3-218ENST00000548919 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
RAPGEF3-218ENST00000548919 ARID4BQ4LE39 1312 aaPredicted RBP19.08■□□□□ 0.64
RAPGEF3-218ENST00000548919 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.64
RAPGEF3-218ENST00000548919 RALGAPBQ86X10 1494 aa19.07■□□□□ 0.64
RAPGEF3-218ENST00000548919 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
RAPGEF3-218ENST00000548919 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
RAPGEF3-218ENST00000548919 DCAF11Q8TEB1 546 aa19.06■□□□□ 0.64
RAPGEF3-218ENST00000548919 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
RAPGEF3-218ENST00000548919 NOP58Q9Y2X3 529 aaKnown RBP19.05■□□□□ 0.64
RAPGEF3-218ENST00000548919 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
RAPGEF3-218ENST00000548919 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
RAPGEF3-218ENST00000548919 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
RAPGEF3-218ENST00000548919 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
RAPGEF3-218ENST00000548919 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
RAPGEF3-218ENST00000548919 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
RAPGEF3-218ENST00000548919 NBR1Q14596 966 aa19.02■□□□□ 0.64
RAPGEF3-218ENST00000548919 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
RAPGEF3-218ENST00000548919 HNRNPMP52272 730 aaKnown RBP eCLIP19.02■□□□□ 0.63
RAPGEF3-218ENST00000548919 TSPY4P0CV99 314 aa19■□□□□ 0.63
RAPGEF3-218ENST00000548919 TSPY10P0CW01 314 aa19■□□□□ 0.63
RAPGEF3-218ENST00000548919 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
RAPGEF3-218ENST00000548919 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
RAPGEF3-218ENST00000548919 ARHGEF12Q9NZN5 1544 aa18.99■□□□□ 0.63
RAPGEF3-218ENST00000548919 CARMIL2Q6F5E8 1435 aa18.98■□□□□ 0.63
RAPGEF3-218ENST00000548919 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
RAPGEF3-218ENST00000548919 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF3-218ENST00000548919 DEKP35659 375 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms