RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
PRIM1-203ENST00000548173 FRMPD1Q5SYB0 1578 aa12.72□□□□□ -0.37
PRIM1-203ENST00000548173 CFAP74Q9C0B2 1584 aa12.72□□□□□ -0.37
PRIM1-203ENST00000548173 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
PRIM1-203ENST00000548173 MYO5CQ9NQX4 1742 aa12.7□□□□□ -0.38
PRIM1-203ENST00000548173 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
PRIM1-203ENST00000548173 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
PRIM1-203ENST00000548173 SCAPERQ9BY12 1400 aa12.68□□□□□ -0.38
PRIM1-203ENST00000548173 ARHGAP5Q13017 1502 aa12.66□□□□□ -0.38
PRIM1-203ENST00000548173 ZMYM4Q5VZL5 1548 aa12.65□□□□□ -0.38
PRIM1-203ENST00000548173 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
PRIM1-203ENST00000548173 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
PRIM1-203ENST00000548173 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
PRIM1-203ENST00000548173 PREX2Q70Z35 1606 aa12.63□□□□□ -0.39
PRIM1-203ENST00000548173 MAGI2Q86UL8 1455 aa12.63□□□□□ -0.39
PRIM1-203ENST00000548173 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
PRIM1-203ENST00000548173 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
PRIM1-203ENST00000548173 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
PRIM1-203ENST00000548173 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
PRIM1-203ENST00000548173 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
PRIM1-203ENST00000548173 AFAP1Q8N556 730 aa12.61□□□□□ -0.39
PRIM1-203ENST00000548173 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
PRIM1-203ENST00000548173 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
PRIM1-203ENST00000548173 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
PRIM1-203ENST00000548173 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
PRIM1-203ENST00000548173 ARID4BQ4LE39 1312 aaPredicted RBP12.59□□□□□ -0.39
PRIM1-203ENST00000548173 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
PRIM1-203ENST00000548173 ABCC1P33527 1531 aa12.58□□□□□ -0.4
PRIM1-203ENST00000548173 KDM5CP41229 1560 aa12.58□□□□□ -0.4
PRIM1-203ENST00000548173 TRAPPC8Q9Y2L5 1435 aa12.57□□□□□ -0.4
PRIM1-203ENST00000548173 CFDP1Q9UEE9 299 aaPredicted RBP12.57□□□□□ -0.4
PRIM1-203ENST00000548173 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
PRIM1-203ENST00000548173 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
PRIM1-203ENST00000548173 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
PRIM1-203ENST00000548173 ATP10AO60312 1499 aa12.56□□□□□ -0.4
PRIM1-203ENST00000548173 BCORL1Q5H9F3 1711 aa12.56□□□□□ -0.4
PRIM1-203ENST00000548173 SAMD9LQ8IVG5 1584 aa12.56□□□□□ -0.4
PRIM1-203ENST00000548173 ITSN2Q9NZM3 1697 aa12.55□□□□□ -0.4
PRIM1-203ENST00000548173 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
PRIM1-203ENST00000548173 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
PRIM1-203ENST00000548173 HECW2Q9P2P5 1572 aa12.54□□□□□ -0.4
PRIM1-203ENST00000548173 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
PRIM1-203ENST00000548173 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
PRIM1-203ENST00000548173 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
PRIM1-203ENST00000548173 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRIM1-203ENST00000548173 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
PRIM1-203ENST00000548173 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
PRIM1-203ENST00000548173 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.4
PRIM1-203ENST00000548173 MYT1LQ9UL68 1186 aa12.52□□□□□ -0.41
PRIM1-203ENST00000548173 PTPRMP28827 1452 aa12.52□□□□□ -0.41
PRIM1-203ENST00000548173 LRRC9Q6ZRR7 1453 aa12.52□□□□□ -0.41
PRIM1-203ENST00000548173 MADDQ8WXG6 1647 aa12.51□□□□□ -0.41
PRIM1-203ENST00000548173 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
PRIM1-203ENST00000548173 KANK4Q5T7N3 995 aaPredicted RBP12.51□□□□□ -0.41
PRIM1-203ENST00000548173 ZNF644Q9H582 1327 aaPredicted RBP12.51□□□□□ -0.41
PRIM1-203ENST00000548173 DIP2CQ9Y2E4 1556 aa12.51□□□□□ -0.41
PRIM1-203ENST00000548173 ABCA6Q8N139 1617 aa12.5□□□□□ -0.41
PRIM1-203ENST00000548173 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
PRIM1-203ENST00000548173 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
PRIM1-203ENST00000548173 MLECQ14165 292 aa12.49□□□□□ -0.41
PRIM1-203ENST00000548173 SPAG9O60271 1321 aaKnown RBP12.48□□□□□ -0.41
PRIM1-203ENST00000548173 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
PRIM1-203ENST00000548173 RIMS1Q86UR5 1692 aaKnown RBP12.46□□□□□ -0.41
PRIM1-203ENST00000548173 AGLP35573 1532 aa12.46□□□□□ -0.42
PRIM1-203ENST00000548173 APLP2Q06481 763 aa12.45□□□□□ -0.42
PRIM1-203ENST00000548173 ATP7AQ04656 1500 aa12.45□□□□□ -0.42
PRIM1-203ENST00000548173 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
PRIM1-203ENST00000548173 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
PRIM1-203ENST00000548173 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
PRIM1-203ENST00000548173 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
PRIM1-203ENST00000548173 RTEL1-TNFRSF6BF6WH68 1400 aa12.42□□□□□ -0.42
PRIM1-203ENST00000548173 MYOM3Q5VTT5 1437 aa12.42□□□□□ -0.42
PRIM1-203ENST00000548173 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
PRIM1-203ENST00000548173 MIA2Q96PC5 1412 aa12.41□□□□□ -0.42
PRIM1-203ENST00000548173 A2MP01023 1474 aa12.4□□□□□ -0.42
PRIM1-203ENST00000548173 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
PRIM1-203ENST00000548173 PLXNC1O60486 1568 aa12.39□□□□□ -0.43
PRIM1-203ENST00000548173 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
PRIM1-203ENST00000548173 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
PRIM1-203ENST00000548173 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
PRIM1-203ENST00000548173 TSPY4P0CV99 314 aa12.37□□□□□ -0.43
PRIM1-203ENST00000548173 TSPY10P0CW01 314 aa12.37□□□□□ -0.43
PRIM1-203ENST00000548173 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
PRIM1-203ENST00000548173 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
PRIM1-203ENST00000548173 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
PRIM1-203ENST00000548173 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
PRIM1-203ENST00000548173 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
PRIM1-203ENST00000548173 C3P01024 1663 aa12.33□□□□□ -0.44
PRIM1-203ENST00000548173 GGT6Q6P531 493 aa12.33□□□□□ -0.44
PRIM1-203ENST00000548173 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
PRIM1-203ENST00000548173 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.44
PRIM1-203ENST00000548173 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
PRIM1-203ENST00000548173 PTPN23Q9H3S7 1636 aa12.32□□□□□ -0.44
PRIM1-203ENST00000548173 TCOF1Q13428 1488 aaKnown RBP12.32□□□□□ -0.44
PRIM1-203ENST00000548173 ZMYM3Q14202 1370 aa12.31□□□□□ -0.44
PRIM1-203ENST00000548173 KIF3BO15066 747 aa12.31□□□□□ -0.44
PRIM1-203ENST00000548173 HSPA2P54652 639 aa12.31□□□□□ -0.44
PRIM1-203ENST00000548173 ABCC5O15440 1437 aa12.3□□□□□ -0.44
PRIM1-203ENST00000548173 MROH2AA6NES4 1674 aa12.3□□□□□ -0.44
PRIM1-203ENST00000548173 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms