RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
RNF41-203ENST00000547967 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
RNF41-203ENST00000547967 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.32
RNF41-203ENST00000547967 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.31
RNF41-203ENST00000547967 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
RNF41-203ENST00000547967 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
RNF41-203ENST00000547967 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
RNF41-203ENST00000547967 ROCK1Q13464 1354 aa17■□□□□ 0.31
RNF41-203ENST00000547967 FOXD1Q16676 465 aa16.99■□□□□ 0.31
RNF41-203ENST00000547967 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
RNF41-203ENST00000547967 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
RNF41-203ENST00000547967 CDC42BPAQ5VT25 1732 aa16.98■□□□□ 0.31
RNF41-203ENST00000547967 ABCC2Q92887 1545 aa16.97■□□□□ 0.31
RNF41-203ENST00000547967 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
RNF41-203ENST00000547967 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
RNF41-203ENST00000547967 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
RNF41-203ENST00000547967 PPP1R15AO75807 674 aaPredicted RBP16.95■□□□□ 0.3
RNF41-203ENST00000547967 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
RNF41-203ENST00000547967 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
RNF41-203ENST00000547967 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
RNF41-203ENST00000547967 MIER1Q8N108 512 aa16.93■□□□□ 0.3
RNF41-203ENST00000547967 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
RNF41-203ENST00000547967 ANKRD30AQ9BXX3 1397 aa16.91■□□□□ 0.3
RNF41-203ENST00000547967 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
RNF41-203ENST00000547967 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.3
RNF41-203ENST00000547967 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
RNF41-203ENST00000547967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.29
RNF41-203ENST00000547967 TTC37Q6PGP7 1564 aa16.88■□□□□ 0.29
RNF41-203ENST00000547967 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
RNF41-203ENST00000547967 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
RNF41-203ENST00000547967 ZCCHC11Q5TAX3 1644 aaKnown RBP16.86■□□□□ 0.29
RNF41-203ENST00000547967 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
RNF41-203ENST00000547967 ADGRL2O95490 1459 aa16.85■□□□□ 0.29
RNF41-203ENST00000547967 ANKRD50Q9ULJ7 1429 aa16.85■□□□□ 0.29
RNF41-203ENST00000547967 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
RNF41-203ENST00000547967 MBD5Q9P267 1494 aa16.85■□□□□ 0.29
RNF41-203ENST00000547967 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
RNF41-203ENST00000547967 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
RNF41-203ENST00000547967 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
RNF41-203ENST00000547967 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
RNF41-203ENST00000547967 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
RNF41-203ENST00000547967 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
RNF41-203ENST00000547967 ANKRD30BQ9BXX2 1392 aa16.81■□□□□ 0.28
RNF41-203ENST00000547967 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
RNF41-203ENST00000547967 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
RNF41-203ENST00000547967 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
RNF41-203ENST00000547967 PKD2Q13563 968 aa16.8■□□□□ 0.28
RNF41-203ENST00000547967 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
RNF41-203ENST00000547967 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
RNF41-203ENST00000547967 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
RNF41-203ENST00000547967 PZPP20742 1482 aa16.79■□□□□ 0.28
RNF41-203ENST00000547967 NUP155O75694 1391 aa16.79■□□□□ 0.28
RNF41-203ENST00000547967 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
RNF41-203ENST00000547967 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
RNF41-203ENST00000547967 MYO5CQ9NQX4 1742 aa16.78■□□□□ 0.28
RNF41-203ENST00000547967 PLCH2O75038 1416 aa16.77■□□□□ 0.28
RNF41-203ENST00000547967 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
RNF41-203ENST00000547967 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
RNF41-203ENST00000547967 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
RNF41-203ENST00000547967 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
RNF41-203ENST00000547967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
RNF41-203ENST00000547967 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
RNF41-203ENST00000547967 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
RNF41-203ENST00000547967 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
RNF41-203ENST00000547967 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.26
RNF41-203ENST00000547967 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
RNF41-203ENST00000547967 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
RNF41-203ENST00000547967 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
RNF41-203ENST00000547967 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
RNF41-203ENST00000547967 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
RNF41-203ENST00000547967 MYT1LQ9UL68 1186 aa16.66■□□□□ 0.26
RNF41-203ENST00000547967 SPAG9O60271 1321 aaKnown RBP16.65■□□□□ 0.26
RNF41-203ENST00000547967 HSPA5P11021 654 aaKnown RBP16.65■□□□□ 0.26
RNF41-203ENST00000547967 TEX14Q8IWB6 1497 aa16.64■□□□□ 0.25
RNF41-203ENST00000547967 ABCC1P33527 1531 aa16.64■□□□□ 0.25
RNF41-203ENST00000547967 FANCAO15360 1455 aa16.63■□□□□ 0.25
RNF41-203ENST00000547967 MAST1Q9Y2H9 1570 aa16.63■□□□□ 0.25
RNF41-203ENST00000547967 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
RNF41-203ENST00000547967 FAM135AQ9P2D6 1515 aa16.61■□□□□ 0.25
RNF41-203ENST00000547967 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
RNF41-203ENST00000547967 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
RNF41-203ENST00000547967 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
RNF41-203ENST00000547967 PLXNC1O60486 1568 aa16.58■□□□□ 0.25
RNF41-203ENST00000547967 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.25
RNF41-203ENST00000547967 ABCA9Q8IUA7 1624 aa16.58■□□□□ 0.24
RNF41-203ENST00000547967 DUOX2Q9NRD8 1548 aa16.58■□□□□ 0.24
RNF41-203ENST00000547967 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
RNF41-203ENST00000547967 ADGRL1O94910 1474 aa16.57■□□□□ 0.24
RNF41-203ENST00000547967 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
RNF41-203ENST00000547967 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
RNF41-203ENST00000547967 RGL3Q3MIN7 710 aa16.55■□□□□ 0.24
RNF41-203ENST00000547967 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
RNF41-203ENST00000547967 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
RNF41-203ENST00000547967 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
RNF41-203ENST00000547967 UNC13BO14795 1591 aa16.52■□□□□ 0.23
RNF41-203ENST00000547967 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.23
RNF41-203ENST00000547967 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
RNF41-203ENST00000547967 ZFYVE16Q7Z3T8 1539 aa16.51■□□□□ 0.23
RNF41-203ENST00000547967 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
RNF41-203ENST00000547967 KIF3BO15066 747 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms