RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 SETD5Q9C0A6 1442 aa16.47■□□□□ 0.23
LINC00485-201ENST00000547179 PLEKHH2Q8IVE3 1493 aa16.47■□□□□ 0.23
LINC00485-201ENST00000547179 HRCP23327 699 aa16.46■□□□□ 0.23
LINC00485-201ENST00000547179 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
LINC00485-201ENST00000547179 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
LINC00485-201ENST00000547179 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
LINC00485-201ENST00000547179 PLCH2O75038 1416 aa16.42■□□□□ 0.22
LINC00485-201ENST00000547179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC00485-201ENST00000547179 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
LINC00485-201ENST00000547179 DAPK1P53355 1430 aa16.41■□□□□ 0.22
LINC00485-201ENST00000547179 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
LINC00485-201ENST00000547179 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
LINC00485-201ENST00000547179 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
LINC00485-201ENST00000547179 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
LINC00485-201ENST00000547179 RAB3GAP2Q9H2M9 1393 aa16.39■□□□□ 0.21
LINC00485-201ENST00000547179 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
LINC00485-201ENST00000547179 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
LINC00485-201ENST00000547179 AKNAQ7Z591 1439 aa16.38■□□□□ 0.21
LINC00485-201ENST00000547179 TTC37Q6PGP7 1564 aa16.37■□□□□ 0.21
LINC00485-201ENST00000547179 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
LINC00485-201ENST00000547179 ABCC5O15440 1437 aa16.37■□□□□ 0.21
LINC00485-201ENST00000547179 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
LINC00485-201ENST00000547179 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
LINC00485-201ENST00000547179 HNRNPMP52272 730 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00485-201ENST00000547179 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
LINC00485-201ENST00000547179 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
LINC00485-201ENST00000547179 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
LINC00485-201ENST00000547179 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
LINC00485-201ENST00000547179 MAPKBP1O60336 1514 aa16.34■□□□□ 0.21
LINC00485-201ENST00000547179 CD109Q6YHK3 1445 aa16.34■□□□□ 0.21
LINC00485-201ENST00000547179 TRIM52Q96A61 297 aa16.34■□□□□ 0.21
LINC00485-201ENST00000547179 ABCA9Q8IUA7 1624 aa16.33■□□□□ 0.2
LINC00485-201ENST00000547179 ARHGEF5Q12774 1597 aa16.32■□□□□ 0.2
LINC00485-201ENST00000547179 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
LINC00485-201ENST00000547179 PTPRKQ15262 1439 aa16.32■□□□□ 0.2
LINC00485-201ENST00000547179 FANCAO15360 1455 aa16.31■□□□□ 0.2
LINC00485-201ENST00000547179 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
LINC00485-201ENST00000547179 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
LINC00485-201ENST00000547179 NAIPQ13075 1403 aa16.3■□□□□ 0.2
LINC00485-201ENST00000547179 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
LINC00485-201ENST00000547179 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
LINC00485-201ENST00000547179 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
LINC00485-201ENST00000547179 CFAP74Q9C0B2 1584 aa16.28■□□□□ 0.2
LINC00485-201ENST00000547179 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
LINC00485-201ENST00000547179 ADGRL2O95490 1459 aa16.27■□□□□ 0.19
LINC00485-201ENST00000547179 DHX57Q6P158 1386 aaKnown RBP16.26■□□□□ 0.19
LINC00485-201ENST00000547179 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
LINC00485-201ENST00000547179 ADGRL1O94910 1474 aa16.26■□□□□ 0.19
LINC00485-201ENST00000547179 MBD5Q9P267 1494 aa16.26■□□□□ 0.19
LINC00485-201ENST00000547179 ADGBQ8N7X0 1667 aa16.25■□□□□ 0.19
LINC00485-201ENST00000547179 SCAPERQ9BY12 1400 aa16.25■□□□□ 0.19
LINC00485-201ENST00000547179 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
LINC00485-201ENST00000547179 GCC2Q8IWJ2 1684 aa16.23■□□□□ 0.19
LINC00485-201ENST00000547179 ABCC1P33527 1531 aa16.23■□□□□ 0.19
LINC00485-201ENST00000547179 NEO1Q92859 1461 aa16.23■□□□□ 0.19
LINC00485-201ENST00000547179 CROCC2H7BZ55 1655 aa16.22■□□□□ 0.19
LINC00485-201ENST00000547179 GLI2P10070 1586 aa16.22■□□□□ 0.19
LINC00485-201ENST00000547179 ANKRD50Q9ULJ7 1429 aa16.22■□□□□ 0.19
LINC00485-201ENST00000547179 TEX14Q8IWB6 1497 aa16.2■□□□□ 0.18
LINC00485-201ENST00000547179 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
LINC00485-201ENST00000547179 MAST1Q9Y2H9 1570 aa16.19■□□□□ 0.18
LINC00485-201ENST00000547179 AFAP1Q8N556 730 aa16.19■□□□□ 0.18
LINC00485-201ENST00000547179 TRAPPC8Q9Y2L5 1435 aa16.17■□□□□ 0.18
LINC00485-201ENST00000547179 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
LINC00485-201ENST00000547179 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
LINC00485-201ENST00000547179 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
LINC00485-201ENST00000547179 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
LINC00485-201ENST00000547179 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
LINC00485-201ENST00000547179 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.17
LINC00485-201ENST00000547179 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.17
LINC00485-201ENST00000547179 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
LINC00485-201ENST00000547179 NUP155O75694 1391 aa16.13■□□□□ 0.17
LINC00485-201ENST00000547179 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
LINC00485-201ENST00000547179 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
LINC00485-201ENST00000547179 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
LINC00485-201ENST00000547179 POGZQ7Z3K3 1410 aa16.11■□□□□ 0.17
LINC00485-201ENST00000547179 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
LINC00485-201ENST00000547179 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
LINC00485-201ENST00000547179 KANK1Q14678 1352 aa16.1■□□□□ 0.17
LINC00485-201ENST00000547179 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
LINC00485-201ENST00000547179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00485-201ENST00000547179 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
LINC00485-201ENST00000547179 TONSLQ96HA7 1378 aa16.06■□□□□ 0.16
LINC00485-201ENST00000547179 ZFYVE16Q7Z3T8 1539 aa16.06■□□□□ 0.16
LINC00485-201ENST00000547179 MLH3Q9UHC1 1453 aa16.06■□□□□ 0.16
LINC00485-201ENST00000547179 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
LINC00485-201ENST00000547179 RAPGEF3O95398 923 aa16.05■□□□□ 0.16
LINC00485-201ENST00000547179 PKD2Q13563 968 aa16.05■□□□□ 0.16
LINC00485-201ENST00000547179 KIF3BO15066 747 aa16.04■□□□□ 0.16
LINC00485-201ENST00000547179 KDM6BO15054 1643 aa16.04■□□□□ 0.16
LINC00485-201ENST00000547179 INO80Q9ULG1 1556 aaPredicted RBP16.03■□□□□ 0.16
LINC00485-201ENST00000547179 TSPOAP1O95153 1857 aa16.02■□□□□ 0.16
LINC00485-201ENST00000547179 HECW2Q9P2P5 1572 aa16.02■□□□□ 0.15
LINC00485-201ENST00000547179 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.15
LINC00485-201ENST00000547179 A2MP01023 1474 aa16.01■□□□□ 0.15
LINC00485-201ENST00000547179 KDM5CP41229 1560 aa16.01■□□□□ 0.15
LINC00485-201ENST00000547179 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
LINC00485-201ENST00000547179 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
LINC00485-201ENST00000547179 PZPP20742 1482 aa15.98■□□□□ 0.15
LINC00485-201ENST00000547179 FOXD1Q16676 465 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms