RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 GPATCH8Q9UKJ3 1502 aaKnown RBP26.3■■□□□ 1.8
CCDC38-203ENST00000546803 MYO5CQ9NQX4 1742 aa26.28■■□□□ 1.8
CCDC38-203ENST00000546803 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
CCDC38-203ENST00000546803 NCOA2Q15596 1464 aa26.27■■□□□ 1.8
CCDC38-203ENST00000546803 DENND4BO75064 1496 aaPredicted RBP26.26■■□□□ 1.79
CCDC38-203ENST00000546803 ADGRL1O94910 1474 aa26.25■■□□□ 1.79
CCDC38-203ENST00000546803 RAPGEF3O95398 923 aa26.25■■□□□ 1.79
CCDC38-203ENST00000546803 SCAPERQ9BY12 1400 aa26.24■■□□□ 1.79
CCDC38-203ENST00000546803 PREX2Q70Z35 1606 aa26.24■■□□□ 1.79
CCDC38-203ENST00000546803 SUPT6HQ7KZ85 1726 aaKnown RBP26.22■■□□□ 1.79
CCDC38-203ENST00000546803 ZNF777Q9ULD5 760 aaPredicted RBP26.19■■□□□ 1.78
CCDC38-203ENST00000546803 CDC42BPAQ5VT25 1732 aa26.17■■□□□ 1.78
CCDC38-203ENST00000546803 CDC42BPBQ9Y5S2 1711 aa26.17■■□□□ 1.78
CCDC38-203ENST00000546803 POGZQ7Z3K3 1410 aa26.16■■□□□ 1.78
CCDC38-203ENST00000546803 PLEKHH2Q8IVE3 1493 aa26.15■■□□□ 1.78
CCDC38-203ENST00000546803 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.77
CCDC38-203ENST00000546803 ABCC1P33527 1531 aa26.12■■□□□ 1.77
CCDC38-203ENST00000546803 ITSN2Q9NZM3 1697 aa26.11■■□□□ 1.77
CCDC38-203ENST00000546803 FRMPD1Q5SYB0 1578 aa26.11■■□□□ 1.77
CCDC38-203ENST00000546803 ZNF518AQ6AHZ1 1483 aa26.11■■□□□ 1.77
CCDC38-203ENST00000546803 AFAP1Q8N556 730 aa26.1■■□□□ 1.77
CCDC38-203ENST00000546803 MYOM3Q5VTT5 1437 aa26.1■■□□□ 1.77
CCDC38-203ENST00000546803 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
CCDC38-203ENST00000546803 SAMD9LQ8IVG5 1584 aa26.08■■□□□ 1.77
CCDC38-203ENST00000546803 MIA2Q96PC5 1412 aa26.08■■□□□ 1.77
CCDC38-203ENST00000546803 MAGI2Q86UL8 1455 aa26.08■■□□□ 1.77
CCDC38-203ENST00000546803 ZNF644Q9H582 1327 aaPredicted RBP26.08■■□□□ 1.77
CCDC38-203ENST00000546803 TRAPPC8Q9Y2L5 1435 aa26.07■■□□□ 1.76
CCDC38-203ENST00000546803 HNRNPMP52272 730 aaKnown RBP eCLIP26.07■■□□□ 1.76
CCDC38-203ENST00000546803 ZMYM4Q5VZL5 1548 aa26.07■■□□□ 1.76
CCDC38-203ENST00000546803 RICTORQ6R327 1708 aa26.06■■□□□ 1.76
CCDC38-203ENST00000546803 RSPH4AQ5TD94 716 aa26.03■■□□□ 1.76
CCDC38-203ENST00000546803 SYCP2Q9BX26 1530 aa26.03■■□□□ 1.76
CCDC38-203ENST00000546803 KDM5CP41229 1560 aa26.01■■□□□ 1.75
CCDC38-203ENST00000546803 CAMSAP2Q08AD1 1489 aa26■■□□□ 1.75
CCDC38-203ENST00000546803 MBD5Q9P267 1494 aa26■■□□□ 1.75
CCDC38-203ENST00000546803 MLH3Q9UHC1 1453 aa25.99■■□□□ 1.75
CCDC38-203ENST00000546803 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
CCDC38-203ENST00000546803 ZFYVE16Q7Z3T8 1539 aa25.98■■□□□ 1.75
CCDC38-203ENST00000546803 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
CCDC38-203ENST00000546803 SPAG9O60271 1321 aaKnown RBP25.97■■□□□ 1.75
CCDC38-203ENST00000546803 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
CCDC38-203ENST00000546803 ARHGEF40Q8TER5 1519 aa25.95■■□□□ 1.74
CCDC38-203ENST00000546803 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
CCDC38-203ENST00000546803 HECW2Q9P2P5 1572 aa25.92■■□□□ 1.74
CCDC38-203ENST00000546803 ATP10AO60312 1499 aa25.91■■□□□ 1.74
CCDC38-203ENST00000546803 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
CCDC38-203ENST00000546803 TSPY4P0CV99 314 aa25.89■■□□□ 1.74
CCDC38-203ENST00000546803 TSPY10P0CW01 314 aa25.89■■□□□ 1.74
CCDC38-203ENST00000546803 RTEL1-TNFRSF6BF6WH68 1400 aa25.88■■□□□ 1.73
CCDC38-203ENST00000546803 ARHGEF5Q12774 1597 aa25.88■■□□□ 1.73
CCDC38-203ENST00000546803 TCOF1Q13428 1488 aaKnown RBP25.88■■□□□ 1.73
CCDC38-203ENST00000546803 C9orf84Q5VXU9 1444 aa25.88■■□□□ 1.73
CCDC38-203ENST00000546803 ARID4BQ4LE39 1312 aaPredicted RBP25.86■■□□□ 1.73
CCDC38-203ENST00000546803 PTPN23Q9H3S7 1636 aa25.85■■□□□ 1.73
CCDC38-203ENST00000546803 ATP7AQ04656 1500 aa25.83■■□□□ 1.73
CCDC38-203ENST00000546803 KDM4FA0A1W2PPD8 638 aa25.82■■□□□ 1.72
CCDC38-203ENST00000546803 FAM50AQ14320 339 aaKnown RBP25.82■■□□□ 1.72
CCDC38-203ENST00000546803 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
CCDC38-203ENST00000546803 KIDINS220Q9ULH0 1771 aa25.8■■□□□ 1.72
CCDC38-203ENST00000546803 INO80Q9ULG1 1556 aaPredicted RBP25.8■■□□□ 1.72
CCDC38-203ENST00000546803 REREQ9P2R6 1566 aa25.79■■□□□ 1.72
CCDC38-203ENST00000546803 ABCC5O15440 1437 aa25.79■■□□□ 1.72
CCDC38-203ENST00000546803 ABCA6Q8N139 1617 aa25.77■■□□□ 1.72
CCDC38-203ENST00000546803 DAPK1P53355 1430 aa25.76■■□□□ 1.71
CCDC38-203ENST00000546803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
CCDC38-203ENST00000546803 A2MP01023 1474 aa25.74■■□□□ 1.71
CCDC38-203ENST00000546803 SHANK2Q9UPX8 1470 aa25.74■■□□□ 1.71
CCDC38-203ENST00000546803 AGLP35573 1532 aa25.73■■□□□ 1.71
CCDC38-203ENST00000546803 MAST1Q9Y2H9 1570 aa25.73■■□□□ 1.71
CCDC38-203ENST00000546803 DHX29Q7Z478 1369 aaKnown RBP25.71■■□□□ 1.71
CCDC38-203ENST00000546803 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
CCDC38-203ENST00000546803 DNMT1P26358 1616 aaKnown RBP25.7■■□□□ 1.7
CCDC38-203ENST00000546803 MLECQ14165 292 aa25.69■■□□□ 1.7
CCDC38-203ENST00000546803 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
CCDC38-203ENST00000546803 SIGLEC1Q9BZZ2 1709 aa25.66■■□□□ 1.7
CCDC38-203ENST00000546803 ANKRD30AQ9BXX3 1397 aa25.65■■□□□ 1.7
CCDC38-203ENST00000546803 BCORL1Q5H9F3 1711 aa25.65■■□□□ 1.7
CCDC38-203ENST00000546803 PLXNC1O60486 1568 aa25.65■■□□□ 1.7
CCDC38-203ENST00000546803 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
CCDC38-203ENST00000546803 ADGBQ8N7X0 1667 aa25.63■■□□□ 1.69
CCDC38-203ENST00000546803 ADAMTSL3P82987 1691 aa25.62■■□□□ 1.69
CCDC38-203ENST00000546803 KIF15Q9NS87 1388 aa25.62■■□□□ 1.69
CCDC38-203ENST00000546803 RRP7BPQ9NSQ0 103 aa25.62■■□□□ 1.69
CCDC38-203ENST00000546803 NCOA1Q15788 1441 aa25.61■■□□□ 1.69
CCDC38-203ENST00000546803 CROCC2H7BZ55 1655 aa25.6■■□□□ 1.69
CCDC38-203ENST00000546803 KIF3BO15066 747 aa25.59■■□□□ 1.69
CCDC38-203ENST00000546803 PPP6R1Q9UPN7 881 aa25.59■■□□□ 1.69
CCDC38-203ENST00000546803 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
CCDC38-203ENST00000546803 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.68
CCDC38-203ENST00000546803 PTPRKQ15262 1439 aa25.57■■□□□ 1.68
CCDC38-203ENST00000546803 ITGAEP38570 1179 aa25.57■■□□□ 1.68
CCDC38-203ENST00000546803 GGT6Q6P531 493 aa25.57■■□□□ 1.68
CCDC38-203ENST00000546803 ESF1Q9H501 851 aaKnown RBP25.57■■□□□ 1.68
CCDC38-203ENST00000546803 ROCK1Q13464 1354 aa25.56■■□□□ 1.68
CCDC38-203ENST00000546803 PTPRMP28827 1452 aa25.53■■□□□ 1.68
CCDC38-203ENST00000546803 MADDQ8WXG6 1647 aa25.53■■□□□ 1.68
CCDC38-203ENST00000546803 ERBINQ96RT1 1412 aa25.53■■□□□ 1.68
CCDC38-203ENST00000546803 CNTLNQ9NXG0 1405 aa25.52■■□□□ 1.68
CCDC38-203ENST00000546803 ANKRD50Q9ULJ7 1429 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms