RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 MYO5CQ9NQX4 1742 aa24.2■■□□□ 1.46
USP15-206ENST00000546718 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
USP15-206ENST00000546718 KIF14Q15058 1648 aa24.18■■□□□ 1.46
USP15-206ENST00000546718 HSPA2P54652 639 aa24.18■■□□□ 1.46
USP15-206ENST00000546718 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
USP15-206ENST00000546718 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
USP15-206ENST00000546718 PLPPR3Q6T4P5 718 aa24.15■■□□□ 1.46
USP15-206ENST00000546718 ATP10AO60312 1499 aa24.13■■□□□ 1.45
USP15-206ENST00000546718 C9orf84Q5VXU9 1444 aa24.12■■□□□ 1.45
USP15-206ENST00000546718 MLECQ14165 292 aa24.12■■□□□ 1.45
USP15-206ENST00000546718 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
USP15-206ENST00000546718 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
USP15-206ENST00000546718 KDM5CP41229 1560 aa24.1■■□□□ 1.45
USP15-206ENST00000546718 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
USP15-206ENST00000546718 ATP1B4Q9UN42 357 aaPredicted RBP24.09■■□□□ 1.45
USP15-206ENST00000546718 ZNF518AQ6AHZ1 1483 aa24.08■■□□□ 1.45
USP15-206ENST00000546718 TROQ12816 1431 aaPredicted RBP24.08■■□□□ 1.44
USP15-206ENST00000546718 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
USP15-206ENST00000546718 ARHGAP5Q13017 1502 aa24.06■■□□□ 1.44
USP15-206ENST00000546718 PREX1Q8TCU6 1659 aa24.06■■□□□ 1.44
USP15-206ENST00000546718 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
USP15-206ENST00000546718 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
USP15-206ENST00000546718 CLIP1P30622 1438 aa24.01■■□□□ 1.43
USP15-206ENST00000546718 CDC42BPBQ9Y5S2 1711 aa24.01■■□□□ 1.43
USP15-206ENST00000546718 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
USP15-206ENST00000546718 ABCA6Q8N139 1617 aa24■■□□□ 1.43
USP15-206ENST00000546718 REREQ9P2R6 1566 aa23.99■■□□□ 1.43
USP15-206ENST00000546718 AFAP1Q8N556 730 aa23.99■■□□□ 1.43
USP15-206ENST00000546718 PREX2Q70Z35 1606 aa23.99■■□□□ 1.43
USP15-206ENST00000546718 CEBPAP49715 358 aaPredicted RBP23.98■■□□□ 1.43
USP15-206ENST00000546718 ABCC1P33527 1531 aa23.96■■□□□ 1.43
USP15-206ENST00000546718 CERKQ8TCT0 537 aa23.95■■□□□ 1.42
USP15-206ENST00000546718 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
USP15-206ENST00000546718 STRCQ7RTU9 1775 aa23.94■■□□□ 1.42
USP15-206ENST00000546718 ITSN2Q9NZM3 1697 aa23.93■■□□□ 1.42
USP15-206ENST00000546718 TRAPPC8Q9Y2L5 1435 aa23.92■■□□□ 1.42
USP15-206ENST00000546718 CCDC18Q5T9S5 1454 aa23.91■■□□□ 1.42
USP15-206ENST00000546718 C3P01024 1663 aa23.91■■□□□ 1.42
USP15-206ENST00000546718 CASKIN1Q8WXD9 1431 aa23.91■■□□□ 1.42
USP15-206ENST00000546718 AGLP35573 1532 aa23.89■■□□□ 1.42
USP15-206ENST00000546718 UHRF1BP1Q6BDS2 1440 aa23.89■■□□□ 1.41
USP15-206ENST00000546718 CDC42BPAQ5VT25 1732 aa23.88■■□□□ 1.41
USP15-206ENST00000546718 KIDINS220Q9ULH0 1771 aa23.88■■□□□ 1.41
USP15-206ENST00000546718 MYT1LQ9UL68 1186 aa23.85■■□□□ 1.41
USP15-206ENST00000546718 SETD1BQ9UPS6 1966 aaKnown RBP23.83■■□□□ 1.41
USP15-206ENST00000546718 FYCO1Q9BQS8 1478 aa23.82■■□□□ 1.4
USP15-206ENST00000546718 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
USP15-206ENST00000546718 SYCP2Q9BX26 1530 aa23.78■■□□□ 1.4
USP15-206ENST00000546718 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
USP15-206ENST00000546718 PTPRTO14522 1441 aa23.75■■□□□ 1.39
USP15-206ENST00000546718 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
USP15-206ENST00000546718 GPATCH8Q9UKJ3 1502 aaKnown RBP23.74■■□□□ 1.39
USP15-206ENST00000546718 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
USP15-206ENST00000546718 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
USP15-206ENST00000546718 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
USP15-206ENST00000546718 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
USP15-206ENST00000546718 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
USP15-206ENST00000546718 INO80Q9ULG1 1556 aaPredicted RBP23.7■■□□□ 1.38
USP15-206ENST00000546718 ATP7AQ04656 1500 aa23.69■■□□□ 1.38
USP15-206ENST00000546718 SUPT6HQ7KZ85 1726 aaKnown RBP23.69■■□□□ 1.38
USP15-206ENST00000546718 ZNF777Q9ULD5 760 aaPredicted RBP23.68■■□□□ 1.38
USP15-206ENST00000546718 NPATQ14207 1427 aa23.67■■□□□ 1.38
USP15-206ENST00000546718 SPAG9O60271 1321 aaKnown RBP23.65■■□□□ 1.38
USP15-206ENST00000546718 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
USP15-206ENST00000546718 KIAA1107Q9UPP5 1409 aa23.65■■□□□ 1.38
USP15-206ENST00000546718 CLTCQ00610 1675 aaKnown RBP23.64■■□□□ 1.38
USP15-206ENST00000546718 HNRNPMP52272 730 aaKnown RBP eCLIP23.64■■□□□ 1.373e-7■■■■□ 24.5
USP15-206ENST00000546718 ZNF142P52746 1687 aaPredicted RBP23.62■■□□□ 1.37
USP15-206ENST00000546718 ZMYM3Q14202 1370 aa23.62■■□□□ 1.37
USP15-206ENST00000546718 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
USP15-206ENST00000546718 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
USP15-206ENST00000546718 A2MP01023 1474 aa23.61■■□□□ 1.37
USP15-206ENST00000546718 IQSEC2Q5JU85 1478 aa23.59■■□□□ 1.37
USP15-206ENST00000546718 CCNB3Q8WWL7 1395 aa23.58■■□□□ 1.37
USP15-206ENST00000546718 DISP3Q9P2K9 1392 aa23.58■■□□□ 1.37
USP15-206ENST00000546718 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
USP15-206ENST00000546718 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
USP15-206ENST00000546718 ADGBQ8N7X0 1667 aa23.56■■□□□ 1.36
USP15-206ENST00000546718 CEP170BQ9Y4F5 1589 aaPredicted RBP23.56■■□□□ 1.36
USP15-206ENST00000546718 ILDR2Q71H61 639 aa23.55■■□□□ 1.36
USP15-206ENST00000546718 PTPRKQ15262 1439 aa23.55■■□□□ 1.36
USP15-206ENST00000546718 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
USP15-206ENST00000546718 SPATA31D1Q6ZQQ2 1576 aa23.54■■□□□ 1.36
USP15-206ENST00000546718 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
USP15-206ENST00000546718 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
USP15-206ENST00000546718 EHBP1L1Q8N3D4 1523 aa23.52■■□□□ 1.36
USP15-206ENST00000546718 MBD5Q9P267 1494 aa23.51■■□□□ 1.35
USP15-206ENST00000546718 ZNF644Q9H582 1327 aaPredicted RBP23.51■■□□□ 1.35
USP15-206ENST00000546718 NCKAP5LQ9HCH0 1330 aa23.51■■□□□ 1.35
USP15-206ENST00000546718 ZNF335Q9H4Z2 1342 aaPredicted RBP23.49■■□□□ 1.35
USP15-206ENST00000546718 GGT6Q6P531 493 aa23.48■■□□□ 1.35
USP15-206ENST00000546718 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
USP15-206ENST00000546718 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
USP15-206ENST00000546718 RTEL1-TNFRSF6BF6WH68 1400 aa23.43■■□□□ 1.34
USP15-206ENST00000546718 PKD2Q13563 968 aa23.43■■□□□ 1.34
USP15-206ENST00000546718 DNMT1P26358 1616 aaKnown RBP23.43■■□□□ 1.34
USP15-206ENST00000546718 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
USP15-206ENST00000546718 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
USP15-206ENST00000546718 SOCS7O14512 581 aa23.4■■□□□ 1.34
USP15-206ENST00000546718 DHX29Q7Z478 1369 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms