RNA–Protein interactions for RNA: ENST00000546626.1

PRPF40B-205, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-205ENST00000546626 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
PRPF40B-205ENST00000546626 ZFYVE16Q7Z3T8 1539 aa22.11■■□□□ 1.13
PRPF40B-205ENST00000546626 ADAMTSL3P82987 1691 aa22.1■■□□□ 1.13
PRPF40B-205ENST00000546626 PTPRMP28827 1452 aa22.09■■□□□ 1.13
PRPF40B-205ENST00000546626 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
PRPF40B-205ENST00000546626 YEATS2Q9ULM3 1422 aa22.09■■□□□ 1.13
PRPF40B-205ENST00000546626 ZNF518AQ6AHZ1 1483 aa22.07■■□□□ 1.12
PRPF40B-205ENST00000546626 HECW2Q9P2P5 1572 aa22.06■■□□□ 1.12
PRPF40B-205ENST00000546626 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
PRPF40B-205ENST00000546626 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
PRPF40B-205ENST00000546626 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
PRPF40B-205ENST00000546626 ATP10AO60312 1499 aa22.04■■□□□ 1.12
PRPF40B-205ENST00000546626 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
PRPF40B-205ENST00000546626 C9orf84Q5VXU9 1444 aa22.01■■□□□ 1.11
PRPF40B-205ENST00000546626 MLECQ14165 292 aa21.99■■□□□ 1.11
PRPF40B-205ENST00000546626 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
PRPF40B-205ENST00000546626 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
PRPF40B-205ENST00000546626 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
PRPF40B-205ENST00000546626 KDM5CP41229 1560 aa21.96■■□□□ 1.11
PRPF40B-205ENST00000546626 PREX2Q70Z35 1606 aa21.95■■□□□ 1.1
PRPF40B-205ENST00000546626 MLH3Q9UHC1 1453 aa21.95■■□□□ 1.1
PRPF40B-205ENST00000546626 CDC42BPBQ9Y5S2 1711 aa21.94■■□□□ 1.1
PRPF40B-205ENST00000546626 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
PRPF40B-205ENST00000546626 CCNB3Q8WWL7 1395 aa21.93■■□□□ 1.1
PRPF40B-205ENST00000546626 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
PRPF40B-205ENST00000546626 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
PRPF40B-205ENST00000546626 TRAPPC8Q9Y2L5 1435 aa21.93■■□□□ 1.1
PRPF40B-205ENST00000546626 ABCC1P33527 1531 aa21.92■■□□□ 1.1
PRPF40B-205ENST00000546626 ARHGEF12Q9NZN5 1544 aa21.91■■□□□ 1.1
PRPF40B-205ENST00000546626 RIMS1Q86UR5 1692 aaKnown RBP21.89■■□□□ 1.1
PRPF40B-205ENST00000546626 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.09
PRPF40B-205ENST00000546626 PLEKHH2Q8IVE3 1493 aa21.88■■□□□ 1.09
PRPF40B-205ENST00000546626 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
PRPF40B-205ENST00000546626 SIGLEC1Q9BZZ2 1709 aa21.87■■□□□ 1.09
PRPF40B-205ENST00000546626 CDC42BPAQ5VT25 1732 aa21.86■■□□□ 1.09
PRPF40B-205ENST00000546626 HNRNPMP52272 730 aaKnown RBP eCLIP21.86■■□□□ 1.09
PRPF40B-205ENST00000546626 REREQ9P2R6 1566 aa21.86■■□□□ 1.09
PRPF40B-205ENST00000546626 SPAG9O60271 1321 aaKnown RBP21.85■■□□□ 1.09
PRPF40B-205ENST00000546626 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
PRPF40B-205ENST00000546626 DIP2CQ9Y2E4 1556 aa21.84■■□□□ 1.09
PRPF40B-205ENST00000546626 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.09
PRPF40B-205ENST00000546626 ITSN2Q9NZM3 1697 aa21.83■■□□□ 1.09
PRPF40B-205ENST00000546626 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
PRPF40B-205ENST00000546626 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
PRPF40B-205ENST00000546626 AGLP35573 1532 aa21.81■■□□□ 1.08
PRPF40B-205ENST00000546626 SAMD9LQ8IVG5 1584 aa21.81■■□□□ 1.08
PRPF40B-205ENST00000546626 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
PRPF40B-205ENST00000546626 FER1L4A9Z1Z3 1794 aa21.79■■□□□ 1.08
PRPF40B-205ENST00000546626 ABCA6Q8N139 1617 aa21.79■■□□□ 1.08
PRPF40B-205ENST00000546626 ILDR1Q86SU0 546 aaPredicted RBP21.78■■□□□ 1.08
PRPF40B-205ENST00000546626 CEBPAP49715 358 aaPredicted RBP21.77■■□□□ 1.08
PRPF40B-205ENST00000546626 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
PRPF40B-205ENST00000546626 KIDINS220Q9ULH0 1771 aa21.75■■□□□ 1.07
PRPF40B-205ENST00000546626 HSPA2P54652 639 aa21.75■■□□□ 1.07
PRPF40B-205ENST00000546626 ZNF644Q9H582 1327 aaPredicted RBP21.74■■□□□ 1.07
PRPF40B-205ENST00000546626 CNTLNQ9NXG0 1405 aa21.73■■□□□ 1.07
PRPF40B-205ENST00000546626 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
PRPF40B-205ENST00000546626 TIAM1Q13009 1591 aa21.73■■□□□ 1.07
PRPF40B-205ENST00000546626 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
PRPF40B-205ENST00000546626 ATP7AQ04656 1500 aa21.7■■□□□ 1.07
PRPF40B-205ENST00000546626 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
PRPF40B-205ENST00000546626 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
PRPF40B-205ENST00000546626 A2MP01023 1474 aa21.68■■□□□ 1.06
PRPF40B-205ENST00000546626 UHRF1BP1Q6BDS2 1440 aa21.67■■□□□ 1.06
PRPF40B-205ENST00000546626 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
PRPF40B-205ENST00000546626 SUPT6HQ7KZ85 1726 aaKnown RBP21.66■■□□□ 1.06
PRPF40B-205ENST00000546626 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
PRPF40B-205ENST00000546626 LRRC9Q6ZRR7 1453 aa21.64■■□□□ 1.06
PRPF40B-205ENST00000546626 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
PRPF40B-205ENST00000546626 GGT6Q6P531 493 aa21.63■■□□□ 1.05
PRPF40B-205ENST00000546626 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
PRPF40B-205ENST00000546626 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
PRPF40B-205ENST00000546626 TSPY4P0CV99 314 aa21.62■■□□□ 1.05
PRPF40B-205ENST00000546626 TSPY10P0CW01 314 aa21.62■■□□□ 1.05
PRPF40B-205ENST00000546626 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 PREX1Q8TCU6 1659 aa21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 APLP2Q06481 763 aa21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 FBXO41Q8TF61 875 aa21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 PLXNC1O60486 1568 aa21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 DHX29Q7Z478 1369 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-205ENST00000546626 CAMSAP2Q08AD1 1489 aa21.6■■□□□ 1.05
PRPF40B-205ENST00000546626 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
PRPF40B-205ENST00000546626 NPATQ14207 1427 aa21.58■■□□□ 1.05
PRPF40B-205ENST00000546626 C3P01024 1663 aa21.56■■□□□ 1.04
PRPF40B-205ENST00000546626 ADGBQ8N7X0 1667 aa21.55■■□□□ 1.04
PRPF40B-205ENST00000546626 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
PRPF40B-205ENST00000546626 KIF3BO15066 747 aa21.53■■□□□ 1.04
PRPF40B-205ENST00000546626 MROH2AA6NES4 1674 aa21.53■■□□□ 1.04
PRPF40B-205ENST00000546626 ARHGEF5Q12774 1597 aa21.52■■□□□ 1.04
PRPF40B-205ENST00000546626 MYOM3Q5VTT5 1437 aa21.5■■□□□ 1.03
PRPF40B-205ENST00000546626 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
PRPF40B-205ENST00000546626 PTPRKQ15262 1439 aa21.47■■□□□ 1.03
PRPF40B-205ENST00000546626 PTPRTO14522 1441 aa21.46■■□□□ 1.03
PRPF40B-205ENST00000546626 WASHC2CQ9Y4E1 1318 aa21.46■■□□□ 1.03
PRPF40B-205ENST00000546626 CLTCQ00610 1675 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-205ENST00000546626 FAM135AQ9P2D6 1515 aa21.44■■□□□ 1.02
PRPF40B-205ENST00000546626 NCOA1Q15788 1441 aa21.43■■□□□ 1.02
PRPF40B-205ENST00000546626 STRCQ7RTU9 1775 aa21.41■■□□□ 1.02
PRPF40B-205ENST00000546626 PKD2Q13563 968 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms