RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
ATXN2-216ENST00000546483 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
ATXN2-216ENST00000546483 PTPRKQ15262 1439 aa16.74■□□□□ 0.27
ATXN2-216ENST00000546483 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
ATXN2-216ENST00000546483 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
ATXN2-216ENST00000546483 FMN1Q68DA7 1419 aa16.71■□□□□ 0.27
ATXN2-216ENST00000546483 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
ATXN2-216ENST00000546483 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
ATXN2-216ENST00000546483 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
ATXN2-216ENST00000546483 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
ATXN2-216ENST00000546483 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
ATXN2-216ENST00000546483 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
ATXN2-216ENST00000546483 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
ATXN2-216ENST00000546483 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
ATXN2-216ENST00000546483 MYOM3Q5VTT5 1437 aa16.66■□□□□ 0.26
ATXN2-216ENST00000546483 RNF123Q5XPI4 1314 aa16.66■□□□□ 0.26
ATXN2-216ENST00000546483 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
ATXN2-216ENST00000546483 DENND4BO75064 1496 aaPredicted RBP16.65■□□□□ 0.26
ATXN2-216ENST00000546483 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
ATXN2-216ENST00000546483 PTPRGP23470 1445 aa16.64■□□□□ 0.25
ATXN2-216ENST00000546483 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
ATXN2-216ENST00000546483 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
ATXN2-216ENST00000546483 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
ATXN2-216ENST00000546483 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
ATXN2-216ENST00000546483 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
ATXN2-216ENST00000546483 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
ATXN2-216ENST00000546483 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
ATXN2-216ENST00000546483 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
ATXN2-216ENST00000546483 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
ATXN2-216ENST00000546483 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
ATXN2-216ENST00000546483 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
ATXN2-216ENST00000546483 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
ATXN2-216ENST00000546483 RAPGEF6Q8TEU7 1601 aa16.58■□□□□ 0.25
ATXN2-216ENST00000546483 IPO9Q96P70 1041 aaKnown RBP16.58■□□□□ 0.25
ATXN2-216ENST00000546483 LRRIQ1Q96JM4 1722 aa16.58■□□□□ 0.24
ATXN2-216ENST00000546483 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.24
ATXN2-216ENST00000546483 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
ATXN2-216ENST00000546483 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
ATXN2-216ENST00000546483 ABCA8O94911 1581 aa16.56■□□□□ 0.24
ATXN2-216ENST00000546483 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
ATXN2-216ENST00000546483 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
ATXN2-216ENST00000546483 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
ATXN2-216ENST00000546483 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
ATXN2-216ENST00000546483 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
ATXN2-216ENST00000546483 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.24
ATXN2-216ENST00000546483 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.23
ATXN2-216ENST00000546483 RPRD2Q5VT52 1461 aaKnown RBP16.51■□□□□ 0.23
ATXN2-216ENST00000546483 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
ATXN2-216ENST00000546483 TEX14Q8IWB6 1497 aa16.51■□□□□ 0.23
ATXN2-216ENST00000546483 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
ATXN2-216ENST00000546483 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
ATXN2-216ENST00000546483 ABCC2Q92887 1545 aa16.5■□□□□ 0.23
ATXN2-216ENST00000546483 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
ATXN2-216ENST00000546483 UHRF1BP1LA0JNW5 1464 aa16.48■□□□□ 0.23
ATXN2-216ENST00000546483 ARID3CA6NKF2 412 aa16.48■□□□□ 0.23
ATXN2-216ENST00000546483 NBR1Q14596 966 aa16.48■□□□□ 0.23
ATXN2-216ENST00000546483 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
ATXN2-216ENST00000546483 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
ATXN2-216ENST00000546483 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
ATXN2-216ENST00000546483 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
ATXN2-216ENST00000546483 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
ATXN2-216ENST00000546483 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
ATXN2-216ENST00000546483 KDM6BO15054 1643 aa16.46■□□□□ 0.23
ATXN2-216ENST00000546483 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.22
ATXN2-216ENST00000546483 ANKRD30BQ9BXX2 1392 aa16.46■□□□□ 0.22
ATXN2-216ENST00000546483 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
ATXN2-216ENST00000546483 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
ATXN2-216ENST00000546483 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
ATXN2-216ENST00000546483 MAGI3Q5TCQ9 1506 aa16.43■□□□□ 0.22
ATXN2-216ENST00000546483 ATP10BO94823 1461 aa16.43■□□□□ 0.22
ATXN2-216ENST00000546483 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
ATXN2-216ENST00000546483 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
ATXN2-216ENST00000546483 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
ATXN2-216ENST00000546483 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
ATXN2-216ENST00000546483 ZCCHC11Q5TAX3 1644 aaKnown RBP16.39■□□□□ 0.21
ATXN2-216ENST00000546483 MBD5Q9P267 1494 aa16.39■□□□□ 0.21
ATXN2-216ENST00000546483 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
ATXN2-216ENST00000546483 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
ATXN2-216ENST00000546483 RRP7BPQ9NSQ0 103 aa16.37■□□□□ 0.21
ATXN2-216ENST00000546483 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
ATXN2-216ENST00000546483 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
ATXN2-216ENST00000546483 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
ATXN2-216ENST00000546483 MS4A1P11836 297 aa16.35■□□□□ 0.21
ATXN2-216ENST00000546483 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
ATXN2-216ENST00000546483 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
ATXN2-216ENST00000546483 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
ATXN2-216ENST00000546483 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
ATXN2-216ENST00000546483 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
ATXN2-216ENST00000546483 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
ATXN2-216ENST00000546483 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
ATXN2-216ENST00000546483 DNMT1P26358 1616 aaKnown RBP16.31■□□□□ 0.2
ATXN2-216ENST00000546483 KIF14Q15058 1648 aa16.31■□□□□ 0.2
ATXN2-216ENST00000546483 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
ATXN2-216ENST00000546483 KDM5CP41229 1560 aa16.31■□□□□ 0.2
ATXN2-216ENST00000546483 DAPK1P53355 1430 aa16.29■□□□□ 0.2
ATXN2-216ENST00000546483 BACH2Q9BYV9 841 aa16.28■□□□□ 0.2
ATXN2-216ENST00000546483 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
ATXN2-216ENST00000546483 BRD4O60885 1362 aaPredicted RBP16.28■□□□□ 0.2
ATXN2-216ENST00000546483 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
ATXN2-216ENST00000546483 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms