RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EPRSP07814 1512 aaKnown RBP20.06■□□□□ 0.8
HOXC11-202ENST00000546378 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
HOXC11-202ENST00000546378 NUP160Q12769 1436 aa20.06■□□□□ 0.8
HOXC11-202ENST00000546378 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
HOXC11-202ENST00000546378 UGGT2Q9NYU1 1516 aa20.06■□□□□ 0.8
HOXC11-202ENST00000546378 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
HOXC11-202ENST00000546378 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
HOXC11-202ENST00000546378 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
HOXC11-202ENST00000546378 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
HOXC11-202ENST00000546378 CCER2I3L3R5 266 aa20.02■□□□□ 0.8
HOXC11-202ENST00000546378 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
HOXC11-202ENST00000546378 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.79
HOXC11-202ENST00000546378 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
HOXC11-202ENST00000546378 MAP3K1Q13233 1512 aa20.01■□□□□ 0.79
HOXC11-202ENST00000546378 KIAA0556O60303 1618 aa20■□□□□ 0.79
HOXC11-202ENST00000546378 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
HOXC11-202ENST00000546378 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
HOXC11-202ENST00000546378 MAPKBP1O60336 1514 aa20■□□□□ 0.79
HOXC11-202ENST00000546378 L3MBTL2Q969R5 705 aa19.98■□□□□ 0.79
HOXC11-202ENST00000546378 NUP153P49790 1475 aaKnown RBP19.97■□□□□ 0.79
HOXC11-202ENST00000546378 SKAP1Q86WV1 359 aa19.97■□□□□ 0.79
HOXC11-202ENST00000546378 PPP4R2Q9NY27 417 aa19.97■□□□□ 0.79
HOXC11-202ENST00000546378 MAGI3Q5TCQ9 1506 aa19.96■□□□□ 0.79
HOXC11-202ENST00000546378 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
HOXC11-202ENST00000546378 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
HOXC11-202ENST00000546378 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
HOXC11-202ENST00000546378 OSCARQ8IYS5 282 aa19.93■□□□□ 0.78
HOXC11-202ENST00000546378 CFAP43Q8NDM7 1665 aa19.91■□□□□ 0.78
HOXC11-202ENST00000546378 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.91■□□□□ 0.78
HOXC11-202ENST00000546378 NOP58Q9Y2X3 529 aaKnown RBP19.91■□□□□ 0.78
HOXC11-202ENST00000546378 ANP32AP39687 249 aaKnown RBP19.9■□□□□ 0.78
HOXC11-202ENST00000546378 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.78
HOXC11-202ENST00000546378 CHD1O14646 1710 aa19.88■□□□□ 0.77
HOXC11-202ENST00000546378 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
HOXC11-202ENST00000546378 PTPRKQ15262 1439 aa19.88■□□□□ 0.77
HOXC11-202ENST00000546378 ZBTB47Q9UFB7 747 aaPredicted RBP19.87■□□□□ 0.77
HOXC11-202ENST00000546378 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
HOXC11-202ENST00000546378 ERCC6L2Q5T890 1561 aa19.86■□□□□ 0.77
HOXC11-202ENST00000546378 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
HOXC11-202ENST00000546378 RAPGEF6Q8TEU7 1601 aa19.86■□□□□ 0.77
HOXC11-202ENST00000546378 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
HOXC11-202ENST00000546378 PRKRIP1Q9H875 184 aaPredicted RBP19.85■□□□□ 0.77
HOXC11-202ENST00000546378 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
HOXC11-202ENST00000546378 ARXQ96QS3 562 aa19.84■□□□□ 0.77
HOXC11-202ENST00000546378 AKNAQ7Z591 1439 aa19.83■□□□□ 0.77
HOXC11-202ENST00000546378 ATP10BO94823 1461 aa19.83■□□□□ 0.77
HOXC11-202ENST00000546378 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
HOXC11-202ENST00000546378 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
HOXC11-202ENST00000546378 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
HOXC11-202ENST00000546378 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
HOXC11-202ENST00000546378 MPHOSPH9Q99550 1183 aa19.81■□□□□ 0.76
HOXC11-202ENST00000546378 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
HOXC11-202ENST00000546378 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
HOXC11-202ENST00000546378 PLIN1O60240 522 aa19.79■□□□□ 0.76
HOXC11-202ENST00000546378 TSPY4P0CV99 314 aa19.78■□□□□ 0.76
HOXC11-202ENST00000546378 TSPY10P0CW01 314 aa19.78■□□□□ 0.76
HOXC11-202ENST00000546378 IL27Q8NEV9 243 aa19.78■□□□□ 0.76
HOXC11-202ENST00000546378 RGL3Q3MIN7 710 aa19.77■□□□□ 0.76
HOXC11-202ENST00000546378 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
HOXC11-202ENST00000546378 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
HOXC11-202ENST00000546378 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
HOXC11-202ENST00000546378 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
HOXC11-202ENST00000546378 CYB5RLQ6IPT4 315 aa19.73■□□□□ 0.75
HOXC11-202ENST00000546378 PTPN23Q9H3S7 1636 aa19.73■□□□□ 0.75
HOXC11-202ENST00000546378 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
HOXC11-202ENST00000546378 NEFMP07197 916 aa19.71■□□□□ 0.75
HOXC11-202ENST00000546378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.71■□□□□ 0.75
HOXC11-202ENST00000546378 EXOC6Q8TAG9 804 aa19.7■□□□□ 0.74
HOXC11-202ENST00000546378 NAIPQ13075 1403 aa19.69■□□□□ 0.74
HOXC11-202ENST00000546378 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
HOXC11-202ENST00000546378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXC11-202ENST00000546378 CC2D1BQ5T0F9 858 aaKnown RBP19.69■□□□□ 0.74
HOXC11-202ENST00000546378 GPATCH8Q9UKJ3 1502 aaKnown RBP19.68■□□□□ 0.74
HOXC11-202ENST00000546378 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
HOXC11-202ENST00000546378 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
HOXC11-202ENST00000546378 KIF14Q15058 1648 aa19.67■□□□□ 0.74
HOXC11-202ENST00000546378 ABCA8O94911 1581 aa19.66■□□□□ 0.74
HOXC11-202ENST00000546378 DAXXQ9UER7 740 aaPredicted RBP19.65■□□□□ 0.74
HOXC11-202ENST00000546378 ABCC5O15440 1437 aa19.65■□□□□ 0.74
HOXC11-202ENST00000546378 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
HOXC11-202ENST00000546378 DAPK1P53355 1430 aa19.64■□□□□ 0.73
HOXC11-202ENST00000546378 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
HOXC11-202ENST00000546378 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
HOXC11-202ENST00000546378 CAMSAP2Q08AD1 1489 aa19.6■□□□□ 0.73
HOXC11-202ENST00000546378 IPO9Q96P70 1041 aaKnown RBP19.59■□□□□ 0.73
HOXC11-202ENST00000546378 CCDC7Q96M83 1385 aa19.59■□□□□ 0.73
HOXC11-202ENST00000546378 RGS3P49796 1198 aa19.59■□□□□ 0.73
HOXC11-202ENST00000546378 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
HOXC11-202ENST00000546378 ZBED9Q6R2W3 1325 aa19.58■□□□□ 0.72
HOXC11-202ENST00000546378 PKD2Q13563 968 aa19.57■□□□□ 0.72
HOXC11-202ENST00000546378 AFAP1Q8N556 730 aa19.57■□□□□ 0.72
HOXC11-202ENST00000546378 DCAF11Q8TEB1 546 aa19.57■□□□□ 0.72
HOXC11-202ENST00000546378 NUDCQ9Y266 331 aa19.57■□□□□ 0.72
HOXC11-202ENST00000546378 ANKRD30AQ9BXX3 1397 aa19.56■□□□□ 0.72
HOXC11-202ENST00000546378 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
HOXC11-202ENST00000546378 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
HOXC11-202ENST00000546378 ST20-MTHFSA0A0A6YYL1 179 aa19.54■□□□□ 0.72
HOXC11-202ENST00000546378 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
HOXC11-202ENST00000546378 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
HOXC11-202ENST00000546378 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms