RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 RTF1Q92541 710 aaKnown RBP14.89□□□□□ -0.03
CIT-217ENST00000545913 MORC1Q86VD1 984 aa14.89□□□□□ -0.03
CIT-217ENST00000545913 L1TD1Q5T7N2 865 aaKnown RBP14.89□□□□□ -0.03
CIT-217ENST00000545913 B4GALNT3Q6L9W6 998 aa14.88□□□□□ -0.03
CIT-217ENST00000545913 MSNP26038 577 aaKnown RBP14.88□□□□□ -0.03
CIT-217ENST00000545913 CCER2I3L3R5 266 aa14.88□□□□□ -0.03
CIT-217ENST00000545913 CALD1Q05682 793 aaKnown RBP14.88□□□□□ -0.03
CIT-217ENST00000545913 IPO8O15397 1037 aaKnown RBP14.87□□□□□ -0.03
CIT-217ENST00000545913 PTMSP20962 102 aa14.87□□□□□ -0.03
CIT-217ENST00000545913 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
CIT-217ENST00000545913 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
CIT-217ENST00000545913 KIAA1211Q6ZU35 1233 aa14.85□□□□□ -0.03
CIT-217ENST00000545913 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
CIT-217ENST00000545913 DRC7Q8IY82 874 aa14.84□□□□□ -0.03
CIT-217ENST00000545913 ROCK2O75116 1388 aaKnown RBP14.84□□□□□ -0.03
CIT-217ENST00000545913 GNL2Q13823 731 aaKnown RBP14.83□□□□□ -0.03
CIT-217ENST00000545913 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.03
CIT-217ENST00000545913 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
CIT-217ENST00000545913 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
CIT-217ENST00000545913 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
CIT-217ENST00000545913 SOX12O15370 315 aa14.8□□□□□ -0.04
CIT-217ENST00000545913 GBP4Q96PP9 640 aa14.79□□□□□ -0.04
CIT-217ENST00000545913 RALBP1Q15311 655 aa14.78□□□□□ -0.04
CIT-217ENST00000545913 KIAA2012Q0VF49 1180 aa14.77□□□□□ -0.04
CIT-217ENST00000545913 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.05
CIT-217ENST00000545913 WIZO95785 1651 aa14.76□□□□□ -0.05
CIT-217ENST00000545913 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
CIT-217ENST00000545913 CLSTN1O94985 981 aa14.76□□□□□ -0.05
CIT-217ENST00000545913 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
CIT-217ENST00000545913 SPAG9O60271 1321 aaKnown RBP14.76□□□□□ -0.05
CIT-217ENST00000545913 GPATCH3Q96I76 525 aa14.76□□□□□ -0.05
CIT-217ENST00000545913 SYAP1Q96A49 352 aaPredicted RBP14.76□□□□□ -0.05
CIT-217ENST00000545913 MLECQ14165 292 aa14.75□□□□□ -0.05
CIT-217ENST00000545913 PKD2Q13563 968 aa14.75□□□□□ -0.05
CIT-217ENST00000545913 SOGA1O94964 1423 aa14.75□□□□□ -0.05
CIT-217ENST00000545913 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
CIT-217ENST00000545913 RCAN3Q9UKA8 241 aa14.75□□□□□ -0.05
CIT-217ENST00000545913 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
CIT-217ENST00000545913 ANKRD30AQ9BXX3 1397 aa14.74□□□□□ -0.05
CIT-217ENST00000545913 STK26Q9P289 416 aa14.74□□□□□ -0.05
CIT-217ENST00000545913 ISY1Q9ULR0 285 aaKnown RBP14.73□□□□□ -0.05
CIT-217ENST00000545913 SPRYD3Q8NCJ5 442 aa14.73□□□□□ -0.05
CIT-217ENST00000545913 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
CIT-217ENST00000545913 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
CIT-217ENST00000545913 ITPRIPQ8IWB1 547 aa14.72□□□□□ -0.05
CIT-217ENST00000545913 CCDC18Q5T9S5 1454 aa14.72□□□□□ -0.05
CIT-217ENST00000545913 PMFBP1Q8TBY8 1022 aa14.72□□□□□ -0.05
CIT-217ENST00000545913 U2AF1L5P0DN76 240 aaPredicted RBP14.72□□□□□ -0.05
CIT-217ENST00000545913 U2AF1Q01081 240 aaKnown RBP eCLIP14.72□□□□□ -0.05
CIT-217ENST00000545913 GGT6Q6P531 493 aa14.72□□□□□ -0.05
CIT-217ENST00000545913 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
CIT-217ENST00000545913 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
CIT-217ENST00000545913 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
CIT-217ENST00000545913 CCDC34Q96HJ3 373 aa14.71□□□□□ -0.05
CIT-217ENST00000545913 NUP155O75694 1391 aa14.71□□□□□ -0.05
CIT-217ENST00000545913 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.06
CIT-217ENST00000545913 RAB3GAP2Q9H2M9 1393 aa14.7□□□□□ -0.06
CIT-217ENST00000545913 TCERG1O14776 1098 aaKnown RBP14.69□□□□□ -0.06
CIT-217ENST00000545913 APBB1O00213 710 aa14.69□□□□□ -0.06
CIT-217ENST00000545913 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
CIT-217ENST00000545913 TPM4P67936 248 aa14.69□□□□□ -0.06
CIT-217ENST00000545913 STK31Q9BXU1 1019 aa14.69□□□□□ -0.06
CIT-217ENST00000545913 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
CIT-217ENST00000545913 PHLDB1Q86UU1 1377 aa14.69□□□□□ -0.06
CIT-217ENST00000545913 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
CIT-217ENST00000545913 TERF2IPQ9NYB0 399 aa14.68□□□□□ -0.06
CIT-217ENST00000545913 MPHOSPH9Q99550 1183 aa14.68□□□□□ -0.06
CIT-217ENST00000545913 CSPP1Q1MSJ5 1256 aa14.67□□□□□ -0.06
CIT-217ENST00000545913 HMMRO75330 724 aa14.67□□□□□ -0.06
CIT-217ENST00000545913 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
CIT-217ENST00000545913 DEKP35659 375 aaKnown RBP14.66□□□□□ -0.06
CIT-217ENST00000545913 EFCAB2Q5VUJ9 269 aa14.65□□□□□ -0.06
CIT-217ENST00000545913 GORABQ5T7V8 394 aa14.65□□□□□ -0.06
CIT-217ENST00000545913 FOXD1Q16676 465 aa14.65□□□□□ -0.06
CIT-217ENST00000545913 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
CIT-217ENST00000545913 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
CIT-217ENST00000545913 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
CIT-217ENST00000545913 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
CIT-217ENST00000545913 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
CIT-217ENST00000545913 TRIM6-TRIM34B2RNG4 842 aa14.63□□□□□ -0.07
CIT-217ENST00000545913 PHF14O94880 888 aa14.63□□□□□ -0.07
CIT-217ENST00000545913 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
CIT-217ENST00000545913 RSPH4AQ5TD94 716 aa14.62□□□□□ -0.07
CIT-217ENST00000545913 CHMP3Q9Y3E7 222 aa14.61□□□□□ -0.07
CIT-217ENST00000545913 ZNF330Q9Y3S2 320 aaPredicted RBP14.61□□□□□ -0.07
CIT-217ENST00000545913 UACAQ9BZF9 1416 aa14.6□□□□□ -0.07
CIT-217ENST00000545913 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
CIT-217ENST00000545913 EID1Q9Y6B2 187 aa14.6□□□□□ -0.07
CIT-217ENST00000545913 SLKQ9H2G2 1235 aaPredicted RBP14.6□□□□□ -0.07
CIT-217ENST00000545913 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
CIT-217ENST00000545913 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
CIT-217ENST00000545913 NLRP13Q86W25 1043 aa14.59□□□□□ -0.07
CIT-217ENST00000545913 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
CIT-217ENST00000545913 PDE3BQ13370 1112 aa14.59□□□□□ -0.07
CIT-217ENST00000545913 KIF3AQ9Y496 699 aa14.59□□□□□ -0.07
CIT-217ENST00000545913 CENPJQ9HC77 1338 aaPredicted RBP14.58□□□□□ -0.07
CIT-217ENST00000545913 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.08
CIT-217ENST00000545913 ST18O60284 1047 aa14.57□□□□□ -0.08
CIT-217ENST00000545913 MFAP1P55081 439 aaKnown RBP14.57□□□□□ -0.08
CIT-217ENST00000545913 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms