RNA–Protein interactions for RNA: ENST00000545855.1

ARF3-210, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-210ENST00000545855 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
ARF3-210ENST00000545855 PTPRMP28827 1452 aa15.59■□□□□ 0.09
ARF3-210ENST00000545855 BCORL1Q5H9F3 1711 aa15.57■□□□□ 0.08
ARF3-210ENST00000545855 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
ARF3-210ENST00000545855 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
ARF3-210ENST00000545855 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
ARF3-210ENST00000545855 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
ARF3-210ENST00000545855 ZFYVE16Q7Z3T8 1539 aa15.55■□□□□ 0.08
ARF3-210ENST00000545855 KIF14Q15058 1648 aa15.54■□□□□ 0.08
ARF3-210ENST00000545855 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
ARF3-210ENST00000545855 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
ARF3-210ENST00000545855 YEATS2Q9ULM3 1422 aa15.53■□□□□ 0.08
ARF3-210ENST00000545855 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
ARF3-210ENST00000545855 MYO5CQ9NQX4 1742 aa15.51■□□□□ 0.07
ARF3-210ENST00000545855 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
ARF3-210ENST00000545855 ATP10AO60312 1499 aa15.48■□□□□ 0.07
ARF3-210ENST00000545855 ZNF518AQ6AHZ1 1483 aa15.48■□□□□ 0.07
ARF3-210ENST00000545855 ARHGAP5Q13017 1502 aa15.48■□□□□ 0.07
ARF3-210ENST00000545855 KDM5CP41229 1560 aa15.47■□□□□ 0.07
ARF3-210ENST00000545855 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.07
ARF3-210ENST00000545855 C9orf84Q5VXU9 1444 aa15.46■□□□□ 0.07
ARF3-210ENST00000545855 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.06
ARF3-210ENST00000545855 LMTK3Q96Q04 1460 aa15.44■□□□□ 0.06
ARF3-210ENST00000545855 ILDR1Q86SU0 546 aaPredicted RBP15.43■□□□□ 0.06
ARF3-210ENST00000545855 AFAP1Q8N556 730 aa15.43■□□□□ 0.06
ARF3-210ENST00000545855 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
ARF3-210ENST00000545855 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
ARF3-210ENST00000545855 PREX2Q70Z35 1606 aa15.43■□□□□ 0.06
ARF3-210ENST00000545855 ARHGEF12Q9NZN5 1544 aa15.43■□□□□ 0.06
ARF3-210ENST00000545855 MLH3Q9UHC1 1453 aa15.42■□□□□ 0.06
ARF3-210ENST00000545855 SUPT6HQ7KZ85 1726 aaKnown RBP15.42■□□□□ 0.06
ARF3-210ENST00000545855 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
ARF3-210ENST00000545855 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
ARF3-210ENST00000545855 APLP2Q06481 763 aa15.41■□□□□ 0.06
ARF3-210ENST00000545855 ABCC1P33527 1531 aa15.41■□□□□ 0.06
ARF3-210ENST00000545855 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
ARF3-210ENST00000545855 DIP2CQ9Y2E4 1556 aa15.38■□□□□ 0.05
ARF3-210ENST00000545855 MLECQ14165 292 aa15.38■□□□□ 0.05
ARF3-210ENST00000545855 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
ARF3-210ENST00000545855 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
ARF3-210ENST00000545855 CDC42BPAQ5VT25 1732 aa15.36■□□□□ 0.05
ARF3-210ENST00000545855 AGLP35573 1532 aa15.36■□□□□ 0.05
ARF3-210ENST00000545855 NCOA2Q15596 1464 aa15.35■□□□□ 0.05
ARF3-210ENST00000545855 FER1L4A9Z1Z3 1794 aa15.35■□□□□ 0.05
ARF3-210ENST00000545855 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
ARF3-210ENST00000545855 ABCA6Q8N139 1617 aa15.34■□□□□ 0.05
ARF3-210ENST00000545855 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
ARF3-210ENST00000545855 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
ARF3-210ENST00000545855 SAMD9LQ8IVG5 1584 aa15.32■□□□□ 0.04
ARF3-210ENST00000545855 PLEKHH2Q8IVE3 1493 aa15.31■□□□□ 0.04
ARF3-210ENST00000545855 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
ARF3-210ENST00000545855 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
ARF3-210ENST00000545855 HSPA2P54652 639 aa15.29■□□□□ 0.04
ARF3-210ENST00000545855 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
ARF3-210ENST00000545855 CFDP1Q9UEE9 299 aaPredicted RBP15.29■□□□□ 0.04
ARF3-210ENST00000545855 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
ARF3-210ENST00000545855 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
ARF3-210ENST00000545855 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
ARF3-210ENST00000545855 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
ARF3-210ENST00000545855 CEBPAP49715 358 aaPredicted RBP15.27■□□□□ 0.04
ARF3-210ENST00000545855 FBXO41Q8TF61 875 aa15.27■□□□□ 0.04
ARF3-210ENST00000545855 SPAG9O60271 1321 aaKnown RBP15.26■□□□□ 0.03
ARF3-210ENST00000545855 HNRNPMP52272 730 aaKnown RBP eCLIP15.26■□□□□ 0.03
ARF3-210ENST00000545855 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
ARF3-210ENST00000545855 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
ARF3-210ENST00000545855 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
ARF3-210ENST00000545855 ATP7AQ04656 1500 aa15.23■□□□□ 0.03
ARF3-210ENST00000545855 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
ARF3-210ENST00000545855 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
ARF3-210ENST00000545855 PLXNC1O60486 1568 aa15.22■□□□□ 0.03
ARF3-210ENST00000545855 MBD5Q9P267 1494 aa15.21■□□□□ 0.03
ARF3-210ENST00000545855 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
ARF3-210ENST00000545855 A2MP01023 1474 aa15.2■□□□□ 0.02
ARF3-210ENST00000545855 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
ARF3-210ENST00000545855 RTEL1-TNFRSF6BF6WH68 1400 aa15.2■□□□□ 0.02
ARF3-210ENST00000545855 C3P01024 1663 aa15.2■□□□□ 0.02
ARF3-210ENST00000545855 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
ARF3-210ENST00000545855 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
ARF3-210ENST00000545855 NPATQ14207 1427 aa15.18■□□□□ 0.02
ARF3-210ENST00000545855 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
ARF3-210ENST00000545855 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
ARF3-210ENST00000545855 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
ARF3-210ENST00000545855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.17■□□□□ 0.02
ARF3-210ENST00000545855 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
ARF3-210ENST00000545855 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
ARF3-210ENST00000545855 ZMYM3Q14202 1370 aa15.16■□□□□ 0.02
ARF3-210ENST00000545855 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
ARF3-210ENST00000545855 RSPH4AQ5TD94 716 aa15.15■□□□□ 0.02
ARF3-210ENST00000545855 PTPRTO14522 1441 aa15.14■□□□□ 0.01
ARF3-210ENST00000545855 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
ARF3-210ENST00000545855 ADGBQ8N7X0 1667 aa15.13■□□□□ 0.01
ARF3-210ENST00000545855 CERKQ8TCT0 537 aa15.13■□□□□ 0.01
ARF3-210ENST00000545855 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
ARF3-210ENST00000545855 CCDC141Q6ZP82 1450 aa15.13■□□□□ 0.01
ARF3-210ENST00000545855 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
ARF3-210ENST00000545855 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
ARF3-210ENST00000545855 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
ARF3-210ENST00000545855 PTPRKQ15262 1439 aa15.1■□□□□ 0.01
ARF3-210ENST00000545855 GGT6Q6P531 493 aa15.1■□□□□ 0.01
ARF3-210ENST00000545855 MAST1Q9Y2H9 1570 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms