RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 UGGT2Q9NYU1 1516 aa9.3□□□□□ -0.92
NECAP1-208ENST00000545807 RRBP1Q9P2E9 1410 aaKnown RBP9.29□□□□□ -0.92
NECAP1-208ENST00000545807 KIAA0556O60303 1618 aa9.29□□□□□ -0.92
NECAP1-208ENST00000545807 CHD1O14646 1710 aa9.29□□□□□ -0.92
NECAP1-208ENST00000545807 PLEKHD1A6NEE1 506 aa9.29□□□□□ -0.92
NECAP1-208ENST00000545807 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
NECAP1-208ENST00000545807 KLHL34Q8N239 644 aa9.29□□□□□ -0.92
NECAP1-208ENST00000545807 LRRIQ1Q96JM4 1722 aa9.29□□□□□ -0.92
NECAP1-208ENST00000545807 RAB3GAP2Q9H2M9 1393 aa9.27□□□□□ -0.93
NECAP1-208ENST00000545807 C11orf95C9JLR9 678 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-208ENST00000545807 NUP153P49790 1475 aaKnown RBP9.27□□□□□ -0.93
NECAP1-208ENST00000545807 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
NECAP1-208ENST00000545807 FGD6Q6ZV73 1430 aa9.27□□□□□ -0.93
NECAP1-208ENST00000545807 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-208ENST00000545807 ERCC6L2Q5T890 1561 aa9.26□□□□□ -0.93
NECAP1-208ENST00000545807 CFAP43Q8NDM7 1665 aa9.26□□□□□ -0.93
NECAP1-208ENST00000545807 SIN3AQ96ST3 1273 aa9.25□□□□□ -0.93
NECAP1-208ENST00000545807 RTN4Q9NQC3 1192 aaKnown RBP9.25□□□□□ -0.93
NECAP1-208ENST00000545807 HECW1Q76N89 1606 aa9.25□□□□□ -0.93
NECAP1-208ENST00000545807 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
NECAP1-208ENST00000545807 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
NECAP1-208ENST00000545807 DHX57Q6P158 1386 aaKnown RBP9.23□□□□□ -0.93
NECAP1-208ENST00000545807 RBM10P98175 930 aaKnown RBP9.23□□□□□ -0.93
NECAP1-208ENST00000545807 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
NECAP1-208ENST00000545807 CCDC18Q5T9S5 1454 aa9.23□□□□□ -0.93
NECAP1-208ENST00000545807 PTPRKQ15262 1439 aa9.22□□□□□ -0.93
NECAP1-208ENST00000545807 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
NECAP1-208ENST00000545807 RAPGEF6Q8TEU7 1601 aa9.22□□□□□ -0.93
NECAP1-208ENST00000545807 BCL11BQ9C0K0 894 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-208ENST00000545807 SETD5Q9C0A6 1442 aa9.22□□□□□ -0.93
NECAP1-208ENST00000545807 FOXD1Q16676 465 aa9.21□□□□□ -0.93
NECAP1-208ENST00000545807 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.93
NECAP1-208ENST00000545807 EHBP1L1Q8N3D4 1523 aa9.21□□□□□ -0.94
NECAP1-208ENST00000545807 HNRNPMP52272 730 aaKnown RBP eCLIP9.2□□□□□ -0.94
NECAP1-208ENST00000545807 SUPT6HQ7KZ85 1726 aaKnown RBP9.2□□□□□ -0.94
NECAP1-208ENST00000545807 ATP10BO94823 1461 aa9.2□□□□□ -0.94
NECAP1-208ENST00000545807 A0A0U1RQG5 324 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-208ENST00000545807 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
NECAP1-208ENST00000545807 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-208ENST00000545807 BCANQ96GW7 911 aa9.18□□□□□ -0.94
NECAP1-208ENST00000545807 UACAQ9BZF9 1416 aa9.17□□□□□ -0.94
NECAP1-208ENST00000545807 ARHGEF11O15085 1522 aa9.17□□□□□ -0.94
NECAP1-208ENST00000545807 FKBP8Q14318 412 aa9.16□□□□□ -0.94
NECAP1-208ENST00000545807 CYB5RLQ6IPT4 315 aa9.16□□□□□ -0.94
NECAP1-208ENST00000545807 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-208ENST00000545807 KIF14Q15058 1648 aa9.16□□□□□ -0.94
NECAP1-208ENST00000545807 WASHC2CQ9Y4E1 1318 aa9.16□□□□□ -0.94
NECAP1-208ENST00000545807 PTPN23Q9H3S7 1636 aa9.16□□□□□ -0.94
NECAP1-208ENST00000545807 WASHC2AQ641Q2 1341 aa9.16□□□□□ -0.94
NECAP1-208ENST00000545807 NOP58Q9Y2X3 529 aaKnown RBP9.14□□□□□ -0.95
NECAP1-208ENST00000545807 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
NECAP1-208ENST00000545807 NPM1P06748 294 aaKnown RBP eCLIP9.13□□□□□ -0.95
NECAP1-208ENST00000545807 TSPY4P0CV99 314 aa9.13□□□□□ -0.95
NECAP1-208ENST00000545807 TSPY10P0CW01 314 aa9.13□□□□□ -0.95
NECAP1-208ENST00000545807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.13□□□□□ -0.95
NECAP1-208ENST00000545807 ABCA8O94911 1581 aa9.13□□□□□ -0.95
NECAP1-208ENST00000545807 GPATCH8Q9UKJ3 1502 aaKnown RBP9.12□□□□□ -0.95
NECAP1-208ENST00000545807 NAIPQ13075 1403 aa9.12□□□□□ -0.95
NECAP1-208ENST00000545807 NBR1Q14596 966 aa9.11□□□□□ -0.95
NECAP1-208ENST00000545807 SLC4A1APQ9BWU0 796 aaKnown RBP9.11□□□□□ -0.95
NECAP1-208ENST00000545807 ABCC5O15440 1437 aa9.1□□□□□ -0.95
NECAP1-208ENST00000545807 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-208ENST00000545807 DAPK1P53355 1430 aa9.09□□□□□ -0.95
NECAP1-208ENST00000545807 CAMSAP2Q08AD1 1489 aa9.09□□□□□ -0.95
NECAP1-208ENST00000545807 MIA2Q96PC5 1412 aa9.09□□□□□ -0.95
NECAP1-208ENST00000545807 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
NECAP1-208ENST00000545807 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
NECAP1-208ENST00000545807 HFM1A2PYH4 1435 aa9.08□□□□□ -0.96
NECAP1-208ENST00000545807 ZNF326Q5BKZ1 582 aaKnown RBP9.08□□□□□ -0.96
NECAP1-208ENST00000545807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.08□□□□□ -0.96
NECAP1-208ENST00000545807 AFAP1Q8N556 730 aa9.08□□□□□ -0.96
NECAP1-208ENST00000545807 KDM6BO15054 1643 aa9.07□□□□□ -0.96
NECAP1-208ENST00000545807 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
NECAP1-208ENST00000545807 ABCC2Q92887 1545 aa9.06□□□□□ -0.96
NECAP1-208ENST00000545807 SHROOM2Q13796 1616 aa9.06□□□□□ -0.96
NECAP1-208ENST00000545807 ARHGAP5Q13017 1502 aa9.06□□□□□ -0.96
NECAP1-208ENST00000545807 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
NECAP1-208ENST00000545807 RSPH4AQ5TD94 716 aa9.06□□□□□ -0.96
NECAP1-208ENST00000545807 TONSLQ96HA7 1378 aa9.06□□□□□ -0.96
NECAP1-208ENST00000545807 TCOF1Q13428 1488 aaKnown RBP9.05□□□□□ -0.96
NECAP1-208ENST00000545807 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
NECAP1-208ENST00000545807 RRP9O43818 475 aaKnown RBP9.04□□□□□ -0.96
NECAP1-208ENST00000545807 PKD2Q13563 968 aa9.04□□□□□ -0.96
NECAP1-208ENST00000545807 ABCC10Q5T3U5 1492 aa9.04□□□□□ -0.96
NECAP1-208ENST00000545807 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
NECAP1-208ENST00000545807 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
NECAP1-208ENST00000545807 NUP155O75694 1391 aa9.03□□□□□ -0.96
NECAP1-208ENST00000545807 USP35Q9P2H5 1018 aa9.02□□□□□ -0.96
NECAP1-208ENST00000545807 TTC37Q6PGP7 1564 aa9.02□□□□□ -0.96
NECAP1-208ENST00000545807 C9orf84Q5VXU9 1444 aa9.02□□□□□ -0.97
NECAP1-208ENST00000545807 CDC42BPAQ5VT25 1732 aa9.02□□□□□ -0.97
NECAP1-208ENST00000545807 NCOA1Q15788 1441 aa9.02□□□□□ -0.97
NECAP1-208ENST00000545807 KIF15Q9NS87 1388 aa9.02□□□□□ -0.97
NECAP1-208ENST00000545807 AKNAQ7Z591 1439 aa9.01□□□□□ -0.97
NECAP1-208ENST00000545807 BRPF3Q9ULD4 1205 aa9.01□□□□□ -0.97
NECAP1-208ENST00000545807 KDM2AQ9Y2K7 1162 aa9.01□□□□□ -0.97
NECAP1-208ENST00000545807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.01□□□□□ -0.97
NECAP1-208ENST00000545807 ZCCHC11Q5TAX3 1644 aaKnown RBP9.01□□□□□ -0.97
NECAP1-208ENST00000545807 ASXL2Q76L83 1435 aa9.01□□□□□ -0.97
NECAP1-208ENST00000545807 ANKRD50Q9ULJ7 1429 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms