RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 CROCC2H7BZ55 1655 aa23.27■■□□□ 1.32
CACNA2D4-217ENST00000545595 TTC37Q6PGP7 1564 aa23.26■■□□□ 1.31
CACNA2D4-217ENST00000545595 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
CACNA2D4-217ENST00000545595 CDC42BPBQ9Y5S2 1711 aa23.26■■□□□ 1.31
CACNA2D4-217ENST00000545595 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
CACNA2D4-217ENST00000545595 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
CACNA2D4-217ENST00000545595 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
CACNA2D4-217ENST00000545595 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
CACNA2D4-217ENST00000545595 ABCC5O15440 1437 aa23.25■■□□□ 1.31
CACNA2D4-217ENST00000545595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.24■■□□□ 1.31
CACNA2D4-217ENST00000545595 MAPKBP1O60336 1514 aa23.24■■□□□ 1.31
CACNA2D4-217ENST00000545595 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
CACNA2D4-217ENST00000545595 ADGBQ8N7X0 1667 aa23.21■■□□□ 1.31
CACNA2D4-217ENST00000545595 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
CACNA2D4-217ENST00000545595 ROCK1Q13464 1354 aa23.19■■□□□ 1.3
CACNA2D4-217ENST00000545595 NPM1P06748 294 aaKnown RBP eCLIP23.18■■□□□ 1.3
CACNA2D4-217ENST00000545595 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
CACNA2D4-217ENST00000545595 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
CACNA2D4-217ENST00000545595 ASXL2Q76L83 1435 aa23.17■■□□□ 1.3
CACNA2D4-217ENST00000545595 KDM6BO15054 1643 aa23.17■■□□□ 1.3
CACNA2D4-217ENST00000545595 ARHGEF5Q12774 1597 aa23.15■■□□□ 1.3
CACNA2D4-217ENST00000545595 RRP7BPQ9NSQ0 103 aa23.14■■□□□ 1.29
CACNA2D4-217ENST00000545595 ADGRL2O95490 1459 aa23.13■■□□□ 1.29
CACNA2D4-217ENST00000545595 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
CACNA2D4-217ENST00000545595 ARAP3Q8WWN8 1544 aa23.13■■□□□ 1.29
CACNA2D4-217ENST00000545595 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
CACNA2D4-217ENST00000545595 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
CACNA2D4-217ENST00000545595 PLCH2O75038 1416 aa23.12■■□□□ 1.29
CACNA2D4-217ENST00000545595 ABCA9Q8IUA7 1624 aa23.1■■□□□ 1.29
CACNA2D4-217ENST00000545595 ARHGAP5Q13017 1502 aa23.1■■□□□ 1.29
CACNA2D4-217ENST00000545595 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
CACNA2D4-217ENST00000545595 MBD5Q9P267 1494 aa23.08■■□□□ 1.29
CACNA2D4-217ENST00000545595 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
CACNA2D4-217ENST00000545595 KIAA1107Q9UPP5 1409 aa23.05■■□□□ 1.28
CACNA2D4-217ENST00000545595 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
CACNA2D4-217ENST00000545595 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
CACNA2D4-217ENST00000545595 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
CACNA2D4-217ENST00000545595 C9orf84Q5VXU9 1444 aa23.03■■□□□ 1.28
CACNA2D4-217ENST00000545595 CCDC141Q6ZP82 1450 aa23.03■■□□□ 1.28
CACNA2D4-217ENST00000545595 EFCAB2Q5VUJ9 269 aa23.01■■□□□ 1.27
CACNA2D4-217ENST00000545595 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
CACNA2D4-217ENST00000545595 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
CACNA2D4-217ENST00000545595 ABCC1P33527 1531 aa22.98■■□□□ 1.27
CACNA2D4-217ENST00000545595 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
CACNA2D4-217ENST00000545595 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
CACNA2D4-217ENST00000545595 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
CACNA2D4-217ENST00000545595 ARHGEF12Q9NZN5 1544 aa22.95■■□□□ 1.26
CACNA2D4-217ENST00000545595 TSPY4P0CV99 314 aa22.92■■□□□ 1.26
CACNA2D4-217ENST00000545595 TSPY10P0CW01 314 aa22.92■■□□□ 1.26
CACNA2D4-217ENST00000545595 FANCAO15360 1455 aa22.92■■□□□ 1.26
CACNA2D4-217ENST00000545595 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
CACNA2D4-217ENST00000545595 GLI2P10070 1586 aa22.91■■□□□ 1.26
CACNA2D4-217ENST00000545595 ANKRD50Q9ULJ7 1429 aa22.9■■□□□ 1.26
CACNA2D4-217ENST00000545595 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
CACNA2D4-217ENST00000545595 CD109Q6YHK3 1445 aa22.89■■□□□ 1.26
CACNA2D4-217ENST00000545595 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.25
CACNA2D4-217ENST00000545595 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
CACNA2D4-217ENST00000545595 PZPP20742 1482 aa22.86■■□□□ 1.25
CACNA2D4-217ENST00000545595 CFAP74Q9C0B2 1584 aa22.86■■□□□ 1.25
CACNA2D4-217ENST00000545595 MAP3K4Q9Y6R4 1608 aa22.85■■□□□ 1.25
CACNA2D4-217ENST00000545595 MPHOSPH9Q99550 1183 aa22.84■■□□□ 1.25
CACNA2D4-217ENST00000545595 KDM5DQ9BY66 1539 aa22.84■■□□□ 1.25
CACNA2D4-217ENST00000545595 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
CACNA2D4-217ENST00000545595 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
CACNA2D4-217ENST00000545595 TIMELESSQ9UNS1 1208 aa22.82■■□□□ 1.24
CACNA2D4-217ENST00000545595 ADGRL1O94910 1474 aa22.81■■□□□ 1.24
CACNA2D4-217ENST00000545595 DIP2BQ9P265 1576 aa22.81■■□□□ 1.24
CACNA2D4-217ENST00000545595 NEO1Q92859 1461 aa22.8■■□□□ 1.24
CACNA2D4-217ENST00000545595 RTEL1-TNFRSF6BF6WH68 1400 aa22.79■■□□□ 1.24
CACNA2D4-217ENST00000545595 ZNF316A6NFI3 1004 aaPredicted RBP22.78■■□□□ 1.24
CACNA2D4-217ENST00000545595 ZFYVE16Q7Z3T8 1539 aa22.78■■□□□ 1.24
CACNA2D4-217ENST00000545595 SCAPERQ9BY12 1400 aa22.77■■□□□ 1.24
CACNA2D4-217ENST00000545595 UNC13BO14795 1591 aa22.77■■□□□ 1.24
CACNA2D4-217ENST00000545595 DUOX2Q9NRD8 1548 aa22.76■■□□□ 1.23
CACNA2D4-217ENST00000545595 INO80Q9ULG1 1556 aaPredicted RBP22.76■■□□□ 1.23
CACNA2D4-217ENST00000545595 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
CACNA2D4-217ENST00000545595 ANKRD30BQ9BXX2 1392 aa22.74■■□□□ 1.23
CACNA2D4-217ENST00000545595 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
CACNA2D4-217ENST00000545595 ZNF518AQ6AHZ1 1483 aa22.72■■□□□ 1.23
CACNA2D4-217ENST00000545595 AFAP1Q8N556 730 aa22.71■■□□□ 1.23
CACNA2D4-217ENST00000545595 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
CACNA2D4-217ENST00000545595 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
CACNA2D4-217ENST00000545595 FAM69CQ0P6D2 419 aa22.71■■□□□ 1.23
CACNA2D4-217ENST00000545595 ATP7AQ04656 1500 aa22.7■■□□□ 1.23
CACNA2D4-217ENST00000545595 FOXD1Q16676 465 aa22.7■■□□□ 1.22
CACNA2D4-217ENST00000545595 NUP155O75694 1391 aa22.69■■□□□ 1.22
CACNA2D4-217ENST00000545595 KDM5CP41229 1560 aa22.69■■□□□ 1.22
CACNA2D4-217ENST00000545595 POGZQ7Z3K3 1410 aa22.68■■□□□ 1.22
CACNA2D4-217ENST00000545595 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
CACNA2D4-217ENST00000545595 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
CACNA2D4-217ENST00000545595 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
CACNA2D4-217ENST00000545595 IQGAP3Q86VI3 1631 aa22.67■■□□□ 1.22
CACNA2D4-217ENST00000545595 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
CACNA2D4-217ENST00000545595 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
CACNA2D4-217ENST00000545595 PPRC1Q5VV67 1664 aaKnown RBP22.64■■□□□ 1.22
CACNA2D4-217ENST00000545595 KIDINS220Q9ULH0 1771 aa22.63■■□□□ 1.21
CACNA2D4-217ENST00000545595 TEX14Q8IWB6 1497 aa22.63■■□□□ 1.21
CACNA2D4-217ENST00000545595 MLH3Q9UHC1 1453 aa22.63■■□□□ 1.21
CACNA2D4-217ENST00000545595 PKD2Q13563 968 aa22.62■■□□□ 1.21
CACNA2D4-217ENST00000545595 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms