RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 NAIPQ13075 1403 aa33.17■■■□□ 2.9
FOXA1-202ENST00000545425 PPP1R15AO75807 674 aaPredicted RBP33.17■■■□□ 2.9
FOXA1-202ENST00000545425 MIA2Q96PC5 1412 aa33.17■■■□□ 2.9
FOXA1-202ENST00000545425 GCC2Q8IWJ2 1684 aa33.14■■■□□ 2.9
FOXA1-202ENST00000545425 PTPRKQ15262 1439 aa33.12■■■□□ 2.89
FOXA1-202ENST00000545425 SIN3AQ96ST3 1273 aa33.12■■■□□ 2.89
FOXA1-202ENST00000545425 EPRSP07814 1512 aaKnown RBP33.11■■■□□ 2.89
FOXA1-202ENST00000545425 ZCCHC11Q5TAX3 1644 aaKnown RBP33.11■■■□□ 2.89
FOXA1-202ENST00000545425 TONSLQ96HA7 1378 aa33.08■■■□□ 2.89
FOXA1-202ENST00000545425 MAGI3Q5TCQ9 1506 aa33.07■■■□□ 2.88
FOXA1-202ENST00000545425 GLI2P10070 1586 aa33.05■■■□□ 2.88
FOXA1-202ENST00000545425 WDR7Q9Y4E6 1490 aa33.02■■■□□ 2.88
FOXA1-202ENST00000545425 ATP10BO94823 1461 aa32.95■■■□□ 2.87
FOXA1-202ENST00000545425 CCER2I3L3R5 266 aa32.93■■■□□ 2.86
FOXA1-202ENST00000545425 RAPGEF6Q8TEU7 1601 aa32.93■■■□□ 2.86
FOXA1-202ENST00000545425 ARID3CA6NKF2 412 aa32.93■■■□□ 2.86
FOXA1-202ENST00000545425 KCNH8Q96L42 1107 aa32.9■■■□□ 2.86
FOXA1-202ENST00000545425 ROCK1Q13464 1354 aa32.89■■■□□ 2.86
FOXA1-202ENST00000545425 TSPOAP1O95153 1857 aa32.87■■■□□ 2.85
FOXA1-202ENST00000545425 NUP153P49790 1475 aaKnown RBP32.85■■■□□ 2.85
FOXA1-202ENST00000545425 CDK13Q14004 1512 aaKnown RBP32.84■■■□□ 2.85
FOXA1-202ENST00000545425 DDX10Q13206 875 aaKnown RBP32.83■■■□□ 2.85
FOXA1-202ENST00000545425 MAP3K4Q9Y6R4 1608 aa32.82■■■□□ 2.85
FOXA1-202ENST00000545425 TEX14Q8IWB6 1497 aa32.8■■■□□ 2.84
FOXA1-202ENST00000545425 CDK11AQ9UQ88 783 aaPredicted RBP32.79■■■□□ 2.84
FOXA1-202ENST00000545425 DNMT1P26358 1616 aaKnown RBP32.78■■■□□ 2.84
FOXA1-202ENST00000545425 KDM6BO15054 1643 aa32.77■■■□□ 2.84
FOXA1-202ENST00000545425 CD109Q6YHK3 1445 aa32.77■■■□□ 2.84
FOXA1-202ENST00000545425 ANP32CO43423 234 aa32.77■■■□□ 2.84
FOXA1-202ENST00000545425 PPRC1Q5VV67 1664 aaKnown RBP32.75■■■□□ 2.83
FOXA1-202ENST00000545425 PLEKHD1A6NEE1 506 aa32.74■■■□□ 2.83
FOXA1-202ENST00000545425 SUPT16HQ9Y5B9 1047 aaKnown RBP32.73■■■□□ 2.83
FOXA1-202ENST00000545425 DAPK1P53355 1430 aa32.72■■■□□ 2.83
FOXA1-202ENST00000545425 ITSN2Q9NZM3 1697 aa32.68■■■□□ 2.82
FOXA1-202ENST00000545425 DENND4BO75064 1496 aaPredicted RBP32.68■■■□□ 2.82
FOXA1-202ENST00000545425 RRP7BPQ9NSQ0 103 aa32.66■■■□□ 2.82
FOXA1-202ENST00000545425 MYT1Q01538 1121 aa32.65■■■□□ 2.82
FOXA1-202ENST00000545425 TROQ12816 1431 aaPredicted RBP32.64■■■□□ 2.82
FOXA1-202ENST00000545425 MPHOSPH9Q99550 1183 aa32.61■■■□□ 2.81
FOXA1-202ENST00000545425 ABCC5O15440 1437 aa32.61■■■□□ 2.81
FOXA1-202ENST00000545425 TRIM52Q96A61 297 aa32.59■■■□□ 2.81
FOXA1-202ENST00000545425 ABCA9Q8IUA7 1624 aa32.59■■■□□ 2.81
FOXA1-202ENST00000545425 COL17A1Q9UMD9 1497 aaPredicted RBP32.57■■■□□ 2.81
FOXA1-202ENST00000545425 CHIC2Q9UKJ5 165 aa32.56■■■□□ 2.8
FOXA1-202ENST00000545425 ADGBQ8N7X0 1667 aa32.56■■■□□ 2.8
FOXA1-202ENST00000545425 RPRD2Q5VT52 1461 aaKnown RBP32.54■■■□□ 2.8
FOXA1-202ENST00000545425 ADGRL2O95490 1459 aa32.52■■■□□ 2.8
FOXA1-202ENST00000545425 ANKRD30BQ9BXX2 1392 aa32.51■■■□□ 2.8
FOXA1-202ENST00000545425 EIF4G2P78344 907 aaKnown RBP eCLIP32.49■■■□□ 2.79
FOXA1-202ENST00000545425 CAMSAP2Q08AD1 1489 aa32.46■■■□□ 2.79
FOXA1-202ENST00000545425 CROCC2H7BZ55 1655 aa32.46■■■□□ 2.79
FOXA1-202ENST00000545425 ARAP3Q8WWN8 1544 aa32.44■■■□□ 2.78
FOXA1-202ENST00000545425 NEO1Q92859 1461 aa32.43■■■□□ 2.78
FOXA1-202ENST00000545425 AEBP2Q6ZN18 517 aaPredicted RBP32.42■■■□□ 2.78
FOXA1-202ENST00000545425 HIRIP3Q9BW71 556 aaPredicted RBP32.42■■■□□ 2.78
FOXA1-202ENST00000545425 GPATCH8Q9UKJ3 1502 aaKnown RBP32.42■■■□□ 2.78
FOXA1-202ENST00000545425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.41■■■□□ 2.78
FOXA1-202ENST00000545425 HSPA5P11021 654 aaKnown RBP32.4■■■□□ 2.78
FOXA1-202ENST00000545425 SHANK2Q9UPX8 1470 aa32.38■■■□□ 2.77
FOXA1-202ENST00000545425 NCOA1Q15788 1441 aa32.37■■■□□ 2.77
FOXA1-202ENST00000545425 POLR1AO95602 1720 aaPredicted RBP32.36■■■□□ 2.77
FOXA1-202ENST00000545425 CNTLNQ9NXG0 1405 aa32.36■■■□□ 2.77
FOXA1-202ENST00000545425 L3MBTL2Q969R5 705 aa32.36■■■□□ 2.77
FOXA1-202ENST00000545425 CFDP1Q9UEE9 299 aaPredicted RBP32.35■■■□□ 2.77
FOXA1-202ENST00000545425 NEFLP07196 543 aa32.34■■■□□ 2.77
FOXA1-202ENST00000545425 WASHC2AQ641Q2 1341 aa32.33■■■□□ 2.77
FOXA1-202ENST00000545425 ANKRD30AQ9BXX3 1397 aa32.32■■■□□ 2.76
FOXA1-202ENST00000545425 KIF14Q15058 1648 aa32.32■■■□□ 2.76
FOXA1-202ENST00000545425 PZPP20742 1482 aa32.31■■■□□ 2.76
FOXA1-202ENST00000545425 TTC37Q6PGP7 1564 aa32.31■■■□□ 2.76
FOXA1-202ENST00000545425 FANCAO15360 1455 aa32.3■■■□□ 2.76
FOXA1-202ENST00000545425 PLCH2O75038 1416 aa32.29■■■□□ 2.76
FOXA1-202ENST00000545425 SLC4A1APQ9BWU0 796 aaKnown RBP32.29■■■□□ 2.76
FOXA1-202ENST00000545425 KIAA1107Q9UPP5 1409 aa32.27■■■□□ 2.76
FOXA1-202ENST00000545425 RAPGEF3O95398 923 aa32.26■■■□□ 2.76
FOXA1-202ENST00000545425 ZNF644Q9H582 1327 aaPredicted RBP32.26■■■□□ 2.76
FOXA1-202ENST00000545425 CCDC7Q96M83 1385 aa32.25■■■□□ 2.75
FOXA1-202ENST00000545425 CFAP74Q9C0B2 1584 aa32.24■■■□□ 2.75
FOXA1-202ENST00000545425 SPATA31E1Q6ZUB1 1445 aa32.23■■■□□ 2.75
FOXA1-202ENST00000545425 EFCAB2Q5VUJ9 269 aa32.22■■■□□ 2.75
FOXA1-202ENST00000545425 MBD5Q9P267 1494 aa32.22■■■□□ 2.75
FOXA1-202ENST00000545425 CDC42BPAQ5VT25 1732 aa32.22■■■□□ 2.75
FOXA1-202ENST00000545425 KDM4FA0A1W2PPD8 638 aa32.21■■■□□ 2.75
FOXA1-202ENST00000545425 KDM5DQ9BY66 1539 aa32.21■■■□□ 2.75
FOXA1-202ENST00000545425 ARHGEF5Q12774 1597 aa32.19■■■□□ 2.74
FOXA1-202ENST00000545425 FKBP8Q14318 412 aa32.16■■■□□ 2.74
FOXA1-202ENST00000545425 ANKRD50Q9ULJ7 1429 aa32.15■■■□□ 2.74
FOXA1-202ENST00000545425 ARID4BQ4LE39 1312 aaPredicted RBP32.15■■■□□ 2.74
FOXA1-202ENST00000545425 ADGRL1O94910 1474 aa32.12■■■□□ 2.73
FOXA1-202ENST00000545425 ARHGEF12Q9NZN5 1544 aa32.11■■■□□ 2.73
FOXA1-202ENST00000545425 MYO5CQ9NQX4 1742 aa32.11■■■□□ 2.73
FOXA1-202ENST00000545425 FOXD1Q16676 465 aa32.1■■■□□ 2.73
FOXA1-202ENST00000545425 NBPF8Q3BBV2 869 aa32.1■■■□□ 2.73
FOXA1-202ENST00000545425 SCAPERQ9BY12 1400 aa32.1■■■□□ 2.73
FOXA1-202ENST00000545425 C9orf84Q5VXU9 1444 aa32.09■■■□□ 2.73
FOXA1-202ENST00000545425 FRMPD1Q5SYB0 1578 aa32.09■■■□□ 2.73
FOXA1-202ENST00000545425 UHRF1BP1Q6BDS2 1440 aa32.09■■■□□ 2.73
FOXA1-202ENST00000545425 ARHGAP5Q13017 1502 aa32.08■■■□□ 2.73
FOXA1-202ENST00000545425 ERICH6BQ5W0A0 696 aa32.07■■■□□ 2.73
FOXA1-202ENST00000545425 TSHZ2Q9NRE2 1034 aa32.07■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms