RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 OS9Q13438 667 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-216ENST00000545170 R3HCC1Q9Y3T6 440 aaKnown RBP10.82□□□□□ -0.68
ATXN3-216ENST00000545170 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
ATXN3-216ENST00000545170 CFAP53Q96M91 514 aa10.81□□□□□ -0.68
ATXN3-216ENST00000545170 CWC15Q9P013 229 aaKnown RBP10.81□□□□□ -0.68
ATXN3-216ENST00000545170 RDXP35241 583 aaKnown RBP10.81□□□□□ -0.68
ATXN3-216ENST00000545170 RBM10P98175 930 aaKnown RBP10.81□□□□□ -0.68
ATXN3-216ENST00000545170 TPM3P06753 285 aa10.8□□□□□ -0.68
ATXN3-216ENST00000545170 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
ATXN3-216ENST00000545170 KNSTRNQ9Y448 316 aa10.79□□□□□ -0.68
ATXN3-216ENST00000545170 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
ATXN3-216ENST00000545170 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
ATXN3-216ENST00000545170 UBE2Q2Q8WVN8 375 aa10.78□□□□□ -0.68
ATXN3-216ENST00000545170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATXN3-216ENST00000545170 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
ATXN3-216ENST00000545170 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
ATXN3-216ENST00000545170 FOXD4L5Q5VV16 416 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-216ENST00000545170 FOXD4L4Q8WXT5 416 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-216ENST00000545170 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
ATXN3-216ENST00000545170 MAPK8IP3Q9UPT6 1336 aa10.77□□□□□ -0.69
ATXN3-216ENST00000545170 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
ATXN3-216ENST00000545170 HSP90AB3PQ58FF7 597 aa10.76□□□□□ -0.69
ATXN3-216ENST00000545170 CC2D1BQ5T0F9 858 aaKnown RBP10.76□□□□□ -0.69
ATXN3-216ENST00000545170 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
ATXN3-216ENST00000545170 RRP9O43818 475 aaKnown RBP10.75□□□□□ -0.69
ATXN3-216ENST00000545170 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-216ENST00000545170 CREBRFQ8IUR6 639 aa10.74□□□□□ -0.69
ATXN3-216ENST00000545170 CCDC70Q6NSX1 233 aa10.74□□□□□ -0.69
ATXN3-216ENST00000545170 PLCD4Q9BRC7 762 aa10.74□□□□□ -0.69
ATXN3-216ENST00000545170 H0YHG0 523 aa10.74□□□□□ -0.69
ATXN3-216ENST00000545170 KIF16BQ96L93 1317 aa10.74□□□□□ -0.69
ATXN3-216ENST00000545170 AEBP1Q8IUX7 1158 aa10.74□□□□□ -0.69
ATXN3-216ENST00000545170 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
ATXN3-216ENST00000545170 PDE4AP27815 886 aa10.73□□□□□ -0.69
ATXN3-216ENST00000545170 ARGLU1Q9NWB6 273 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-216ENST00000545170 NOL8Q76FK4 1167 aaKnown RBP10.73□□□□□ -0.69
ATXN3-216ENST00000545170 RWDD1Q9H446 243 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-216ENST00000545170 GOLGA6L19H0YKK7 550 aa10.72□□□□□ -0.69
ATXN3-216ENST00000545170 APBB1O00213 710 aa10.72□□□□□ -0.69
ATXN3-216ENST00000545170 CCDC191Q8NCU4 936 aa10.71□□□□□ -0.69
ATXN3-216ENST00000545170 AK7Q96M32 723 aa10.71□□□□□ -0.69
ATXN3-216ENST00000545170 PMFBP1Q8TBY8 1022 aa10.7□□□□□ -0.7
ATXN3-216ENST00000545170 TAF3Q5VWG9 929 aa10.7□□□□□ -0.7
ATXN3-216ENST00000545170 STK11IPQ8N1F8 1099 aa10.7□□□□□ -0.7
ATXN3-216ENST00000545170 PRM3Q9NNZ6 103 aa10.7□□□□□ -0.7
ATXN3-216ENST00000545170 DIAPH3Q9NSV4 1193 aa10.7□□□□□ -0.7
ATXN3-216ENST00000545170 HOMER1Q86YM7 354 aa10.69□□□□□ -0.7
ATXN3-216ENST00000545170 A0A0G2JS52 829 aa10.69□□□□□ -0.7
ATXN3-216ENST00000545170 ACBD3Q9H3P7 528 aa10.69□□□□□ -0.7
ATXN3-216ENST00000545170 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
ATXN3-216ENST00000545170 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 LEKR1Q6ZMV7 388 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 RUFY1Q96T51 708 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 CCDC39Q9UFE4 941 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 RRP7BPQ9NSQ0 103 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 FBLN2P98095 1184 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 SIN3AQ96ST3 1273 aa10.68□□□□□ -0.7
ATXN3-216ENST00000545170 HSP90B2PQ58FF3 399 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 IFT57Q9NWB7 429 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 ST18O60284 1047 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 NUDCQ9Y266 331 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 FOXD4L6Q3SYB3 417 aaPredicted RBP10.67□□□□□ -0.7
ATXN3-216ENST00000545170 FOXD4L3Q6VB84 417 aaPredicted RBP10.67□□□□□ -0.7
ATXN3-216ENST00000545170 MNS1Q8NEH6 495 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
ATXN3-216ENST00000545170 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 ITPRIPQ8IWB1 547 aa10.67□□□□□ -0.7
ATXN3-216ENST00000545170 BECN2A8MW95 431 aa10.66□□□□□ -0.7
ATXN3-216ENST00000545170 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-216ENST00000545170 MRE11P49959 708 aa10.66□□□□□ -0.7
ATXN3-216ENST00000545170 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
ATXN3-216ENST00000545170 ZMYND15Q9H091 742 aa10.65□□□□□ -0.7
ATXN3-216ENST00000545170 DEF6Q9H4E7 631 aa10.65□□□□□ -0.7
ATXN3-216ENST00000545170 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
ATXN3-216ENST00000545170 PES1O00541 588 aaKnown RBP10.65□□□□□ -0.71
ATXN3-216ENST00000545170 HMMRO75330 724 aa10.65□□□□□ -0.71
ATXN3-216ENST00000545170 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.71
ATXN3-216ENST00000545170 NASPP49321 788 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-216ENST00000545170 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
ATXN3-216ENST00000545170 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
ATXN3-216ENST00000545170 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
ATXN3-216ENST00000545170 UQCRHLA0A096LP55 91 aa10.64□□□□□ -0.71
ATXN3-216ENST00000545170 ERICH4A6NGS2 130 aa10.64□□□□□ -0.71
ATXN3-216ENST00000545170 UQCRHP07919 91 aa10.64□□□□□ -0.71
ATXN3-216ENST00000545170 SENP3Q9H4L4 574 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-216ENST00000545170 EEA1Q15075 1411 aa10.64□□□□□ -0.71
ATXN3-216ENST00000545170 TPD52L1Q16890 204 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-216ENST00000545170 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
ATXN3-216ENST00000545170 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
ATXN3-216ENST00000545170 KIF3AQ9Y496 699 aa10.63□□□□□ -0.71
ATXN3-216ENST00000545170 TPM1P09493 284 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 GPATCH11Q8N954 259 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 TSPYL1Q9H0U9 437 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 RGL3Q3MIN7 710 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 ESF1Q9H501 851 aaKnown RBP10.62□□□□□ -0.71
ATXN3-216ENST00000545170 CDR1P51861 262 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
ATXN3-216ENST00000545170 SKIDA1Q1XH10 827 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms