RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
TNC-213ENST00000544972 DAPK1P53355 1430 aa16.96■□□□□ 0.31
TNC-213ENST00000544972 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
TNC-213ENST00000544972 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
TNC-213ENST00000544972 ABCC5O15440 1437 aa16.96■□□□□ 0.31
TNC-213ENST00000544972 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
TNC-213ENST00000544972 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
TNC-213ENST00000544972 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
TNC-213ENST00000544972 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
TNC-213ENST00000544972 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
TNC-213ENST00000544972 NAIPQ13075 1403 aa16.93■□□□□ 0.3
TNC-213ENST00000544972 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
TNC-213ENST00000544972 AKNAQ7Z591 1439 aa16.91■□□□□ 0.3
TNC-213ENST00000544972 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
TNC-213ENST00000544972 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
TNC-213ENST00000544972 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
TNC-213ENST00000544972 PLCH2O75038 1416 aa16.9■□□□□ 0.3
TNC-213ENST00000544972 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
TNC-213ENST00000544972 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.29
TNC-213ENST00000544972 GCC2Q8IWJ2 1684 aa16.89■□□□□ 0.29
TNC-213ENST00000544972 ROCK1Q13464 1354 aa16.88■□□□□ 0.29
TNC-213ENST00000544972 MBD5Q9P267 1494 aa16.88■□□□□ 0.29
TNC-213ENST00000544972 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
TNC-213ENST00000544972 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
TNC-213ENST00000544972 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
TNC-213ENST00000544972 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
TNC-213ENST00000544972 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNC-213ENST00000544972 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
TNC-213ENST00000544972 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
TNC-213ENST00000544972 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
TNC-213ENST00000544972 KDM6BO15054 1643 aa16.83■□□□□ 0.29
TNC-213ENST00000544972 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.28
TNC-213ENST00000544972 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
TNC-213ENST00000544972 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
TNC-213ENST00000544972 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
TNC-213ENST00000544972 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
TNC-213ENST00000544972 EFCAB2Q5VUJ9 269 aa16.82■□□□□ 0.28
TNC-213ENST00000544972 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
TNC-213ENST00000544972 ARHGEF12Q9NZN5 1544 aa16.81■□□□□ 0.28
TNC-213ENST00000544972 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
TNC-213ENST00000544972 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
TNC-213ENST00000544972 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
TNC-213ENST00000544972 ABCC1P33527 1531 aa16.79■□□□□ 0.28
TNC-213ENST00000544972 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
TNC-213ENST00000544972 TSPY4P0CV99 314 aa16.77■□□□□ 0.27
TNC-213ENST00000544972 TSPY10P0CW01 314 aa16.77■□□□□ 0.27
TNC-213ENST00000544972 FANCAO15360 1455 aa16.76■□□□□ 0.27
TNC-213ENST00000544972 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
TNC-213ENST00000544972 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
TNC-213ENST00000544972 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
TNC-213ENST00000544972 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
TNC-213ENST00000544972 DENND4BO75064 1496 aaPredicted RBP16.7■□□□□ 0.26
TNC-213ENST00000544972 KIF15Q9NS87 1388 aa16.69■□□□□ 0.26
TNC-213ENST00000544972 GLI2P10070 1586 aa16.69■□□□□ 0.26
TNC-213ENST00000544972 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
TNC-213ENST00000544972 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
TNC-213ENST00000544972 MAP3K4Q9Y6R4 1608 aa16.68■□□□□ 0.26
TNC-213ENST00000544972 ACIN1Q9UKV3 1341 aaKnown RBP16.68■□□□□ 0.26
TNC-213ENST00000544972 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
TNC-213ENST00000544972 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
TNC-213ENST00000544972 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
TNC-213ENST00000544972 CFAP74Q9C0B2 1584 aa16.66■□□□□ 0.26
TNC-213ENST00000544972 DIP2BQ9P265 1576 aa16.66■□□□□ 0.26
TNC-213ENST00000544972 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
TNC-213ENST00000544972 RTEL1-TNFRSF6BF6WH68 1400 aa16.64■□□□□ 0.25
TNC-213ENST00000544972 ZFYVE16Q7Z3T8 1539 aa16.64■□□□□ 0.25
TNC-213ENST00000544972 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
TNC-213ENST00000544972 PZPP20742 1482 aa16.63■□□□□ 0.25
TNC-213ENST00000544972 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
TNC-213ENST00000544972 NEO1Q92859 1461 aa16.62■□□□□ 0.25
TNC-213ENST00000544972 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
TNC-213ENST00000544972 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
TNC-213ENST00000544972 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
TNC-213ENST00000544972 ATP7AQ04656 1500 aa16.59■□□□□ 0.25
TNC-213ENST00000544972 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
TNC-213ENST00000544972 ZNF518AQ6AHZ1 1483 aa16.58■□□□□ 0.25
TNC-213ENST00000544972 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
TNC-213ENST00000544972 KDM5CP41229 1560 aa16.58■□□□□ 0.24
TNC-213ENST00000544972 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
TNC-213ENST00000544972 ERBINQ96RT1 1412 aa16.57■□□□□ 0.24
TNC-213ENST00000544972 KIDINS220Q9ULH0 1771 aa16.57■□□□□ 0.24
TNC-213ENST00000544972 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
TNC-213ENST00000544972 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
TNC-213ENST00000544972 NUP155O75694 1391 aa16.56■□□□□ 0.24
TNC-213ENST00000544972 KIF13AQ9H1H9 1805 aa16.56■□□□□ 0.24
TNC-213ENST00000544972 UNC13BO14795 1591 aa16.55■□□□□ 0.24
TNC-213ENST00000544972 FOXD1Q16676 465 aa16.55■□□□□ 0.24
TNC-213ENST00000544972 ANKRD30BQ9BXX2 1392 aa16.53■□□□□ 0.24
TNC-213ENST00000544972 TSPOAP1O95153 1857 aa16.53■□□□□ 0.24
TNC-213ENST00000544972 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.24
TNC-213ENST00000544972 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
TNC-213ENST00000544972 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.23
TNC-213ENST00000544972 RICTORQ6R327 1708 aa16.51■□□□□ 0.23
TNC-213ENST00000544972 FAM135AQ9P2D6 1515 aa16.51■□□□□ 0.23
TNC-213ENST00000544972 HECW2Q9P2P5 1572 aa16.5■□□□□ 0.23
TNC-213ENST00000544972 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
TNC-213ENST00000544972 PKD2Q13563 968 aa16.5■□□□□ 0.23
TNC-213ENST00000544972 IQGAP3Q86VI3 1631 aa16.49■□□□□ 0.23
TNC-213ENST00000544972 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
TNC-213ENST00000544972 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms