RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 FAM69CQ0P6D2 419 aa14.82□□□□□ -0.04
CDK2AP1-206ENST00000544658 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
CDK2AP1-206ENST00000544658 MTUS2Q5JR59 1369 aa14.81□□□□□ -0.04
CDK2AP1-206ENST00000544658 EHBP1L1Q8N3D4 1523 aa14.8□□□□□ -0.04
CDK2AP1-206ENST00000544658 TSPOAP1O95153 1857 aa14.79□□□□□ -0.04
CDK2AP1-206ENST00000544658 GLI2P10070 1586 aa14.79□□□□□ -0.04
CDK2AP1-206ENST00000544658 APLP2Q06481 763 aa14.79□□□□□ -0.04
CDK2AP1-206ENST00000544658 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
CDK2AP1-206ENST00000544658 PPRC1Q5VV67 1664 aaKnown RBP14.78□□□□□ -0.04
CDK2AP1-206ENST00000544658 ABCA9Q8IUA7 1624 aa14.78□□□□□ -0.04
CDK2AP1-206ENST00000544658 NCOA2Q15596 1464 aa14.77□□□□□ -0.04
CDK2AP1-206ENST00000544658 MAP3K4Q9Y6R4 1608 aa14.77□□□□□ -0.05
CDK2AP1-206ENST00000544658 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
CDK2AP1-206ENST00000544658 SUPT6HQ7KZ85 1726 aaKnown RBP14.75□□□□□ -0.05
CDK2AP1-206ENST00000544658 PHLDB1Q86UU1 1377 aa14.75□□□□□ -0.05
CDK2AP1-206ENST00000544658 CDC42BPBQ9Y5S2 1711 aa14.75□□□□□ -0.05
CDK2AP1-206ENST00000544658 GPATCH8Q9UKJ3 1502 aaKnown RBP14.74□□□□□ -0.05
CDK2AP1-206ENST00000544658 CD109Q6YHK3 1445 aa14.73□□□□□ -0.05
CDK2AP1-206ENST00000544658 MYO5CQ9NQX4 1742 aa14.71□□□□□ -0.05
CDK2AP1-206ENST00000544658 KCNA4P22459 653 aa14.7□□□□□ -0.06
CDK2AP1-206ENST00000544658 PREX2Q70Z35 1606 aa14.7□□□□□ -0.06
CDK2AP1-206ENST00000544658 ZNF644Q9H582 1327 aaPredicted RBP14.69□□□□□ -0.06
CDK2AP1-206ENST00000544658 PLCH2O75038 1416 aa14.69□□□□□ -0.06
CDK2AP1-206ENST00000544658 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
CDK2AP1-206ENST00000544658 SAMD9LQ8IVG5 1584 aa14.65□□□□□ -0.06
CDK2AP1-206ENST00000544658 COL17A1Q9UMD9 1497 aaPredicted RBP14.65□□□□□ -0.06
CDK2AP1-206ENST00000544658 ARHGAP5Q13017 1502 aa14.65□□□□□ -0.06
CDK2AP1-206ENST00000544658 ARHGEF12Q9NZN5 1544 aa14.65□□□□□ -0.06
CDK2AP1-206ENST00000544658 MYOM3Q5VTT5 1437 aa14.65□□□□□ -0.06
CDK2AP1-206ENST00000544658 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
CDK2AP1-206ENST00000544658 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
CDK2AP1-206ENST00000544658 FANCAO15360 1455 aa14.63□□□□□ -0.07
CDK2AP1-206ENST00000544658 ITSN2Q9NZM3 1697 aa14.62□□□□□ -0.07
CDK2AP1-206ENST00000544658 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
CDK2AP1-206ENST00000544658 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
CDK2AP1-206ENST00000544658 FGD6Q6ZV73 1430 aa14.61□□□□□ -0.07
CDK2AP1-206ENST00000544658 AKNAQ7Z591 1439 aa14.61□□□□□ -0.07
CDK2AP1-206ENST00000544658 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
CDK2AP1-206ENST00000544658 EFCAB2Q5VUJ9 269 aa14.6□□□□□ -0.07
CDK2AP1-206ENST00000544658 CAMSAP2Q08AD1 1489 aa14.59□□□□□ -0.07
CDK2AP1-206ENST00000544658 HNRNPMP52272 730 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDK2AP1-206ENST00000544658 TRAPPC8Q9Y2L5 1435 aa14.58□□□□□ -0.08
CDK2AP1-206ENST00000544658 NEO1Q92859 1461 aa14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 ABCC1P33527 1531 aa14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 RAPGEF3O95398 923 aa14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 MIA2Q96PC5 1412 aa14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 TCOF1Q13428 1488 aaKnown RBP14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 MBD5Q9P267 1494 aa14.57□□□□□ -0.08
CDK2AP1-206ENST00000544658 SYCP2Q9BX26 1530 aa14.56□□□□□ -0.08
CDK2AP1-206ENST00000544658 RRBP1Q9P2E9 1410 aaKnown RBP14.56□□□□□ -0.08
CDK2AP1-206ENST00000544658 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
CDK2AP1-206ENST00000544658 TEX14Q8IWB6 1497 aa14.56□□□□□ -0.08
CDK2AP1-206ENST00000544658 FRMPD1Q5SYB0 1578 aa14.56□□□□□ -0.08
CDK2AP1-206ENST00000544658 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
CDK2AP1-206ENST00000544658 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
CDK2AP1-206ENST00000544658 PTPRKQ15262 1439 aa14.54□□□□□ -0.08
CDK2AP1-206ENST00000544658 CFAP74Q9C0B2 1584 aa14.54□□□□□ -0.08
CDK2AP1-206ENST00000544658 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
CDK2AP1-206ENST00000544658 ABCC5O15440 1437 aa14.51□□□□□ -0.09
CDK2AP1-206ENST00000544658 KIAA1107Q9UPP5 1409 aa14.51□□□□□ -0.09
CDK2AP1-206ENST00000544658 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
CDK2AP1-206ENST00000544658 DENND4BO75064 1496 aaPredicted RBP14.5□□□□□ -0.09
CDK2AP1-206ENST00000544658 KDM6BO15054 1643 aa14.49□□□□□ -0.09
CDK2AP1-206ENST00000544658 DNMT1P26358 1616 aaKnown RBP14.48□□□□□ -0.09
CDK2AP1-206ENST00000544658 ARHGEF5Q12774 1597 aa14.48□□□□□ -0.09
CDK2AP1-206ENST00000544658 CAPN15O75808 1086 aa14.48□□□□□ -0.09
CDK2AP1-206ENST00000544658 ITGAEP38570 1179 aa14.48□□□□□ -0.09
CDK2AP1-206ENST00000544658 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
CDK2AP1-206ENST00000544658 DAPK1P53355 1430 aa14.48□□□□□ -0.09
CDK2AP1-206ENST00000544658 PLEKHH2Q8IVE3 1493 aa14.47□□□□□ -0.09
CDK2AP1-206ENST00000544658 DSG3P32926 999 aa14.47□□□□□ -0.09
CDK2AP1-206ENST00000544658 KDM5CP41229 1560 aa14.47□□□□□ -0.09
CDK2AP1-206ENST00000544658 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.09
CDK2AP1-206ENST00000544658 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
CDK2AP1-206ENST00000544658 CCDC141Q6ZP82 1450 aa14.45□□□□□ -0.1
CDK2AP1-206ENST00000544658 KIDINS220Q9ULH0 1771 aa14.45□□□□□ -0.1
CDK2AP1-206ENST00000544658 YEATS2Q9ULM3 1422 aa14.45□□□□□ -0.1
CDK2AP1-206ENST00000544658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDK2AP1-206ENST00000544658 SIGLEC1Q9BZZ2 1709 aa14.44□□□□□ -0.1
CDK2AP1-206ENST00000544658 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
CDK2AP1-206ENST00000544658 INO80Q9ULG1 1556 aaPredicted RBP14.43□□□□□ -0.1
CDK2AP1-206ENST00000544658 ZMYM4Q5VZL5 1548 aa14.42□□□□□ -0.1
CDK2AP1-206ENST00000544658 ZFYVE16Q7Z3T8 1539 aa14.42□□□□□ -0.1
CDK2AP1-206ENST00000544658 C9orf84Q5VXU9 1444 aa14.41□□□□□ -0.1
CDK2AP1-206ENST00000544658 ABCA6Q8N139 1617 aa14.41□□□□□ -0.1
CDK2AP1-206ENST00000544658 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
CDK2AP1-206ENST00000544658 HECW2Q9P2P5 1572 aa14.4□□□□□ -0.1
CDK2AP1-206ENST00000544658 MAST1Q9Y2H9 1570 aa14.4□□□□□ -0.1
CDK2AP1-206ENST00000544658 MLH3Q9UHC1 1453 aa14.4□□□□□ -0.1
CDK2AP1-206ENST00000544658 ATP7AQ04656 1500 aa14.4□□□□□ -0.1
CDK2AP1-206ENST00000544658 RRP7BPQ9NSQ0 103 aa14.39□□□□□ -0.11
CDK2AP1-206ENST00000544658 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
CDK2AP1-206ENST00000544658 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
CDK2AP1-206ENST00000544658 ADGBQ8N7X0 1667 aa14.38□□□□□ -0.11
CDK2AP1-206ENST00000544658 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
CDK2AP1-206ENST00000544658 NCOA1Q15788 1441 aa14.37□□□□□ -0.11
CDK2AP1-206ENST00000544658 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
CDK2AP1-206ENST00000544658 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
CDK2AP1-206ENST00000544658 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms