RNA–Protein interactions for RNA: ENST00000544643.5

CCDC189-209, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-209ENST00000544643 ZNF644Q9H582 1327 aaPredicted RBP29.28■■■□□ 2.28
CCDC189-209ENST00000544643 RRP7BPQ9NSQ0 103 aa29.27■■■□□ 2.28
CCDC189-209ENST00000544643 ACIN1Q9UKV3 1341 aaKnown RBP29.24■■■□□ 2.27
CCDC189-209ENST00000544643 CDC42BPAQ5VT25 1732 aa29.24■■■□□ 2.27
CCDC189-209ENST00000544643 TIMELESSQ9UNS1 1208 aa29.23■■■□□ 2.27
CCDC189-209ENST00000544643 DIEXFQ68CQ4 756 aaKnown RBP29.22■■■□□ 2.27
CCDC189-209ENST00000544643 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.27
CCDC189-209ENST00000544643 KDM6BO15054 1643 aa29.15■■■□□ 2.26
CCDC189-209ENST00000544643 SIN3AQ96ST3 1273 aa29.15■■■□□ 2.26
CCDC189-209ENST00000544643 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
CCDC189-209ENST00000544643 ADGBQ8N7X0 1667 aa29.13■■■□□ 2.25
CCDC189-209ENST00000544643 ZNF777Q9ULD5 760 aaPredicted RBP29.13■■■□□ 2.25
CCDC189-209ENST00000544643 ADGRL2O95490 1459 aa29.13■■■□□ 2.25
CCDC189-209ENST00000544643 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
CCDC189-209ENST00000544643 KDM5BQ9UGL1 1544 aa29.08■■■□□ 2.25
CCDC189-209ENST00000544643 PREX2Q70Z35 1606 aa29.08■■■□□ 2.25
CCDC189-209ENST00000544643 NCOA1Q15788 1441 aa29.08■■■□□ 2.25
CCDC189-209ENST00000544643 SHANK2Q9UPX8 1470 aa29.07■■■□□ 2.24
CCDC189-209ENST00000544643 ZCCHC11Q5TAX3 1644 aaKnown RBP29.06■■■□□ 2.24
CCDC189-209ENST00000544643 TRIM52Q96A61 297 aa29.04■■■□□ 2.24
CCDC189-209ENST00000544643 ARHGEF5Q12774 1597 aa29.04■■■□□ 2.24
CCDC189-209ENST00000544643 CDC42BPBQ9Y5S2 1711 aa29.04■■■□□ 2.24
CCDC189-209ENST00000544643 ANKRD30AQ9BXX3 1397 aa29.03■■■□□ 2.24
CCDC189-209ENST00000544643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.02■■■□□ 2.24
CCDC189-209ENST00000544643 DENND4BO75064 1496 aaPredicted RBP29.02■■■□□ 2.24
CCDC189-209ENST00000544643 TTC37Q6PGP7 1564 aa29■■■□□ 2.23
CCDC189-209ENST00000544643 MPHOSPH9Q99550 1183 aa28.99■■■□□ 2.23
CCDC189-209ENST00000544643 SAMD9LQ8IVG5 1584 aa28.98■■■□□ 2.23
CCDC189-209ENST00000544643 MBD5Q9P267 1494 aa28.97■■■□□ 2.23
CCDC189-209ENST00000544643 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
CCDC189-209ENST00000544643 C9orf84Q5VXU9 1444 aa28.96■■■□□ 2.23
CCDC189-209ENST00000544643 PPP1R15AO75807 674 aaPredicted RBP28.96■■■□□ 2.23
CCDC189-209ENST00000544643 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
CCDC189-209ENST00000544643 TONSLQ96HA7 1378 aa28.95■■■□□ 2.22
CCDC189-209ENST00000544643 MYO5CQ9NQX4 1742 aa28.95■■■□□ 2.22
CCDC189-209ENST00000544643 TSPY4P0CV99 314 aa28.93■■■□□ 2.22
CCDC189-209ENST00000544643 TSPY10P0CW01 314 aa28.93■■■□□ 2.22
CCDC189-209ENST00000544643 ARHGAP5Q13017 1502 aa28.92■■■□□ 2.22
CCDC189-209ENST00000544643 CCDC141Q6ZP82 1450 aa28.91■■■□□ 2.22
CCDC189-209ENST00000544643 HNRNPMP52272 730 aaKnown RBP eCLIP28.9■■■□□ 2.22
CCDC189-209ENST00000544643 PLEKHH2Q8IVE3 1493 aa28.9■■■□□ 2.22
CCDC189-209ENST00000544643 ANKRD50Q9ULJ7 1429 aa28.88■■■□□ 2.21
CCDC189-209ENST00000544643 KIAA1107Q9UPP5 1409 aa28.87■■■□□ 2.21
CCDC189-209ENST00000544643 PLCH2O75038 1416 aa28.86■■■□□ 2.21
CCDC189-209ENST00000544643 KCNH8Q96L42 1107 aa28.86■■■□□ 2.21
CCDC189-209ENST00000544643 PZPP20742 1482 aa28.84■■■□□ 2.21
CCDC189-209ENST00000544643 MAST1Q9Y2H9 1570 aa28.83■■■□□ 2.21
CCDC189-209ENST00000544643 SYCP2Q9BX26 1530 aa28.83■■■□□ 2.21
CCDC189-209ENST00000544643 ANKRD30BQ9BXX2 1392 aa28.81■■■□□ 2.2
CCDC189-209ENST00000544643 SLC4A1APQ9BWU0 796 aaKnown RBP28.81■■■□□ 2.2
CCDC189-209ENST00000544643 ARAP3Q8WWN8 1544 aa28.79■■■□□ 2.2
CCDC189-209ENST00000544643 KIF15Q9NS87 1388 aa28.79■■■□□ 2.2
CCDC189-209ENST00000544643 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
CCDC189-209ENST00000544643 EFCAB2Q5VUJ9 269 aa28.77■■■□□ 2.2
CCDC189-209ENST00000544643 KDM5DQ9BY66 1539 aa28.74■■■□□ 2.19
CCDC189-209ENST00000544643 FOXD1Q16676 465 aa28.73■■■□□ 2.19
CCDC189-209ENST00000544643 RPRD2Q5VT52 1461 aaKnown RBP28.73■■■□□ 2.19
CCDC189-209ENST00000544643 ABCC1P33527 1531 aa28.7■■■□□ 2.19
CCDC189-209ENST00000544643 PLXNC1O60486 1568 aa28.7■■■□□ 2.18
CCDC189-209ENST00000544643 ARHGEF12Q9NZN5 1544 aa28.69■■■□□ 2.18
CCDC189-209ENST00000544643 ABCA9Q8IUA7 1624 aa28.68■■■□□ 2.18
CCDC189-209ENST00000544643 MIER1Q8N108 512 aa28.67■■■□□ 2.18
CCDC189-209ENST00000544643 NUP155O75694 1391 aa28.66■■■□□ 2.18
CCDC189-209ENST00000544643 ASXL2Q76L83 1435 aa28.65■■■□□ 2.18
CCDC189-209ENST00000544643 PKD2Q13563 968 aa28.62■■■□□ 2.17
CCDC189-209ENST00000544643 L3MBTL2Q969R5 705 aa28.6■■■□□ 2.17
CCDC189-209ENST00000544643 NPM1P06748 294 aaKnown RBP eCLIP28.6■■■□□ 2.17
CCDC189-209ENST00000544643 TEX14Q8IWB6 1497 aa28.59■■■□□ 2.17
CCDC189-209ENST00000544643 DUOX2Q9NRD8 1548 aa28.59■■■□□ 2.17
CCDC189-209ENST00000544643 UNC13BO14795 1591 aa28.57■■■□□ 2.16
CCDC189-209ENST00000544643 TRAPPC8Q9Y2L5 1435 aa28.56■■■□□ 2.16
CCDC189-209ENST00000544643 FANCAO15360 1455 aa28.54■■■□□ 2.16
CCDC189-209ENST00000544643 RTEL1-TNFRSF6BF6WH68 1400 aa28.54■■■□□ 2.16
CCDC189-209ENST00000544643 ERBINQ96RT1 1412 aa28.53■■■□□ 2.16
CCDC189-209ENST00000544643 FAM135AQ9P2D6 1515 aa28.52■■■□□ 2.16
CCDC189-209ENST00000544643 SPAG9O60271 1321 aaKnown RBP28.48■■■□□ 2.15
CCDC189-209ENST00000544643 MAGI2Q86UL8 1455 aa28.46■■■□□ 2.15
CCDC189-209ENST00000544643 ZFYVE16Q7Z3T8 1539 aa28.45■■■□□ 2.14
CCDC189-209ENST00000544643 IQGAP3Q86VI3 1631 aa28.44■■■□□ 2.14
CCDC189-209ENST00000544643 ADGRL1O94910 1474 aa28.43■■■□□ 2.14
CCDC189-209ENST00000544643 AFAP1Q8N556 730 aa28.42■■■□□ 2.14
CCDC189-209ENST00000544643 HIRIP3Q9BW71 556 aaPredicted RBP28.41■■■□□ 2.14
CCDC189-209ENST00000544643 INO80Q9ULG1 1556 aaPredicted RBP28.4■■■□□ 2.14
CCDC189-209ENST00000544643 SCAPERQ9BY12 1400 aa28.39■■■□□ 2.14
CCDC189-209ENST00000544643 NBPF8Q3BBV2 869 aa28.39■■■□□ 2.13
CCDC189-209ENST00000544643 CENPBP07199 599 aaPredicted RBP28.38■■■□□ 2.13
CCDC189-209ENST00000544643 DDX10Q13206 875 aaKnown RBP28.37■■■□□ 2.13
CCDC189-209ENST00000544643 CFAP74Q9C0B2 1584 aa28.37■■■□□ 2.13
CCDC189-209ENST00000544643 ATP7AQ04656 1500 aa28.37■■■□□ 2.13
CCDC189-209ENST00000544643 EIF4G2P78344 907 aaKnown RBP eCLIP28.37■■■□□ 2.13
CCDC189-209ENST00000544643 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
CCDC189-209ENST00000544643 HSPA5P11021 654 aaKnown RBP28.34■■■□□ 2.13
CCDC189-209ENST00000544643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.34■■■□□ 2.13
CCDC189-209ENST00000544643 UHRF1BP1Q6BDS2 1440 aa28.31■■■□□ 2.12
CCDC189-209ENST00000544643 ATP10AO60312 1499 aa28.28■■■□□ 2.12
CCDC189-209ENST00000544643 ZNF518AQ6AHZ1 1483 aa28.28■■■□□ 2.12
CCDC189-209ENST00000544643 DEPDC5O75140 1603 aa28.28■■■□□ 2.12
CCDC189-209ENST00000544643 PLA2R1Q13018 1463 aa28.27■■■□□ 2.12
CCDC189-209ENST00000544643 CCDC144AA2RUR9 1427 aa28.27■■■□□ 2.12
CCDC189-209ENST00000544643 EIF2AK4Q9P2K8 1649 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms