RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 ROCK1Q13464 1354 aa18.76■□□□□ 0.59
PAAF1-214ENST00000544552 DNMT1P26358 1616 aaKnown RBP18.75■□□□□ 0.59
PAAF1-214ENST00000544552 DAPK1P53355 1430 aa18.75■□□□□ 0.59
PAAF1-214ENST00000544552 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
PAAF1-214ENST00000544552 ABCC5O15440 1437 aa18.74■□□□□ 0.59
PAAF1-214ENST00000544552 ZNF644Q9H582 1327 aaPredicted RBP18.73■□□□□ 0.59
PAAF1-214ENST00000544552 CDC42BPAQ5VT25 1732 aa18.73■□□□□ 0.59
PAAF1-214ENST00000544552 CAMSAP2Q08AD1 1489 aa18.73■□□□□ 0.59
PAAF1-214ENST00000544552 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
PAAF1-214ENST00000544552 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.59
PAAF1-214ENST00000544552 GCC2Q8IWJ2 1684 aa18.71■□□□□ 0.59
PAAF1-214ENST00000544552 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
PAAF1-214ENST00000544552 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
PAAF1-214ENST00000544552 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.57
PAAF1-214ENST00000544552 ASXL2Q76L83 1435 aa18.64■□□□□ 0.57
PAAF1-214ENST00000544552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.57
PAAF1-214ENST00000544552 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
PAAF1-214ENST00000544552 ADGRL2O95490 1459 aa18.63■□□□□ 0.57
PAAF1-214ENST00000544552 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
PAAF1-214ENST00000544552 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
PAAF1-214ENST00000544552 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
PAAF1-214ENST00000544552 CDC42BPBQ9Y5S2 1711 aa18.62■□□□□ 0.57
PAAF1-214ENST00000544552 NCOA1Q15788 1441 aa18.61■□□□□ 0.57
PAAF1-214ENST00000544552 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
PAAF1-214ENST00000544552 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
PAAF1-214ENST00000544552 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
PAAF1-214ENST00000544552 ADGBQ8N7X0 1667 aa18.59■□□□□ 0.57
PAAF1-214ENST00000544552 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.57
PAAF1-214ENST00000544552 MBD5Q9P267 1494 aa18.58■□□□□ 0.57
PAAF1-214ENST00000544552 ANKRD30AQ9BXX3 1397 aa18.58■□□□□ 0.57
PAAF1-214ENST00000544552 PLCH2O75038 1416 aa18.57■□□□□ 0.56
PAAF1-214ENST00000544552 PLEKHH2Q8IVE3 1493 aa18.56■□□□□ 0.56
PAAF1-214ENST00000544552 SAMD9LQ8IVG5 1584 aa18.56■□□□□ 0.56
PAAF1-214ENST00000544552 MYO5CQ9NQX4 1742 aa18.56■□□□□ 0.56
PAAF1-214ENST00000544552 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
PAAF1-214ENST00000544552 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
PAAF1-214ENST00000544552 KCNH8Q96L42 1107 aa18.56■□□□□ 0.56
PAAF1-214ENST00000544552 KDM6BO15054 1643 aa18.55■□□□□ 0.56
PAAF1-214ENST00000544552 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
PAAF1-214ENST00000544552 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
PAAF1-214ENST00000544552 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
PAAF1-214ENST00000544552 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
PAAF1-214ENST00000544552 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
PAAF1-214ENST00000544552 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.56
PAAF1-214ENST00000544552 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
PAAF1-214ENST00000544552 TRIM52Q96A61 297 aa18.52■□□□□ 0.55
PAAF1-214ENST00000544552 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
PAAF1-214ENST00000544552 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
PAAF1-214ENST00000544552 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
PAAF1-214ENST00000544552 DENND4BO75064 1496 aaPredicted RBP18.49■□□□□ 0.55
PAAF1-214ENST00000544552 FAM69CQ0P6D2 419 aa18.48■□□□□ 0.55
PAAF1-214ENST00000544552 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
PAAF1-214ENST00000544552 GLI2P10070 1586 aa18.48■□□□□ 0.55
PAAF1-214ENST00000544552 DIP2BQ9P265 1576 aa18.48■□□□□ 0.55
PAAF1-214ENST00000544552 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
PAAF1-214ENST00000544552 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
PAAF1-214ENST00000544552 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
PAAF1-214ENST00000544552 ABCA9Q8IUA7 1624 aa18.45■□□□□ 0.54
PAAF1-214ENST00000544552 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
PAAF1-214ENST00000544552 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
PAAF1-214ENST00000544552 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
PAAF1-214ENST00000544552 CD109Q6YHK3 1445 aa18.41■□□□□ 0.54
PAAF1-214ENST00000544552 ABCC1P33527 1531 aa18.41■□□□□ 0.54
PAAF1-214ENST00000544552 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
PAAF1-214ENST00000544552 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
PAAF1-214ENST00000544552 PZPP20742 1482 aa18.39■□□□□ 0.54
PAAF1-214ENST00000544552 TONSLQ96HA7 1378 aa18.39■□□□□ 0.53
PAAF1-214ENST00000544552 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
PAAF1-214ENST00000544552 MAP3K4Q9Y6R4 1608 aa18.38■□□□□ 0.53
PAAF1-214ENST00000544552 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
PAAF1-214ENST00000544552 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
PAAF1-214ENST00000544552 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
PAAF1-214ENST00000544552 KDM5DQ9BY66 1539 aa18.37■□□□□ 0.53
PAAF1-214ENST00000544552 FANCAO15360 1455 aa18.35■□□□□ 0.53
PAAF1-214ENST00000544552 RTEL1-TNFRSF6BF6WH68 1400 aa18.35■□□□□ 0.53
PAAF1-214ENST00000544552 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
PAAF1-214ENST00000544552 NUP155O75694 1391 aa18.33■□□□□ 0.52
PAAF1-214ENST00000544552 TEX14Q8IWB6 1497 aa18.32■□□□□ 0.52
PAAF1-214ENST00000544552 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
PAAF1-214ENST00000544552 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
PAAF1-214ENST00000544552 FOXD1Q16676 465 aa18.3■□□□□ 0.52
PAAF1-214ENST00000544552 ERBINQ96RT1 1412 aa18.29■□□□□ 0.52
PAAF1-214ENST00000544552 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
PAAF1-214ENST00000544552 NEO1Q92859 1461 aa18.29■□□□□ 0.52
PAAF1-214ENST00000544552 PKD2Q13563 968 aa18.28■□□□□ 0.52
PAAF1-214ENST00000544552 CFAP74Q9C0B2 1584 aa18.28■□□□□ 0.52
PAAF1-214ENST00000544552 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
PAAF1-214ENST00000544552 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
PAAF1-214ENST00000544552 AFAP1Q8N556 730 aa18.27■□□□□ 0.51
PAAF1-214ENST00000544552 UNC13BO14795 1591 aa18.26■□□□□ 0.51
PAAF1-214ENST00000544552 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
PAAF1-214ENST00000544552 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
PAAF1-214ENST00000544552 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
PAAF1-214ENST00000544552 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
PAAF1-214ENST00000544552 FAM135AQ9P2D6 1515 aa18.23■□□□□ 0.51
PAAF1-214ENST00000544552 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
PAAF1-214ENST00000544552 L3MBTL2Q969R5 705 aa18.22■□□□□ 0.51
PAAF1-214ENST00000544552 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
PAAF1-214ENST00000544552 ATP7AQ04656 1500 aa18.2■□□□□ 0.5
PAAF1-214ENST00000544552 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms