RNA–Protein interactions for RNA: ENST00000544316.1

COPS7A-219, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-219ENST00000544316 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
COPS7A-219ENST00000544316 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
COPS7A-219ENST00000544316 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
COPS7A-219ENST00000544316 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
COPS7A-219ENST00000544316 KIF14Q15058 1648 aa17.07■□□□□ 0.32
COPS7A-219ENST00000544316 ATP10AO60312 1499 aa17.07■□□□□ 0.32
COPS7A-219ENST00000544316 TROQ12816 1431 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-219ENST00000544316 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
COPS7A-219ENST00000544316 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
COPS7A-219ENST00000544316 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
COPS7A-219ENST00000544316 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
COPS7A-219ENST00000544316 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
COPS7A-219ENST00000544316 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
COPS7A-219ENST00000544316 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
COPS7A-219ENST00000544316 MLECQ14165 292 aa17.01■□□□□ 0.31
COPS7A-219ENST00000544316 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
COPS7A-219ENST00000544316 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
COPS7A-219ENST00000544316 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
COPS7A-219ENST00000544316 SETD1BQ9UPS6 1966 aaKnown RBP16.98■□□□□ 0.31
COPS7A-219ENST00000544316 ARHGEF12Q9NZN5 1544 aa16.98■□□□□ 0.31
COPS7A-219ENST00000544316 KDM5CP41229 1560 aa16.98■□□□□ 0.31
COPS7A-219ENST00000544316 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
COPS7A-219ENST00000544316 MLH3Q9UHC1 1453 aa16.95■□□□□ 0.3
COPS7A-219ENST00000544316 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
COPS7A-219ENST00000544316 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
COPS7A-219ENST00000544316 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
COPS7A-219ENST00000544316 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
COPS7A-219ENST00000544316 HSPA2P54652 639 aa16.94■□□□□ 0.3
COPS7A-219ENST00000544316 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
COPS7A-219ENST00000544316 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
COPS7A-219ENST00000544316 LRRIQ1Q96JM4 1722 aa16.92■□□□□ 0.3
COPS7A-219ENST00000544316 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
COPS7A-219ENST00000544316 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
COPS7A-219ENST00000544316 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
COPS7A-219ENST00000544316 AGLP35573 1532 aa16.9■□□□□ 0.3
COPS7A-219ENST00000544316 ABCC1P33527 1531 aa16.88■□□□□ 0.29
COPS7A-219ENST00000544316 DIP2CQ9Y2E4 1556 aa16.88■□□□□ 0.29
COPS7A-219ENST00000544316 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
COPS7A-219ENST00000544316 CNTLNQ9NXG0 1405 aa16.87■□□□□ 0.29
COPS7A-219ENST00000544316 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
COPS7A-219ENST00000544316 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
COPS7A-219ENST00000544316 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
COPS7A-219ENST00000544316 TRAPPC8Q9Y2L5 1435 aa16.85■□□□□ 0.29
COPS7A-219ENST00000544316 CDC42BPAQ5VT25 1732 aa16.84■□□□□ 0.29
COPS7A-219ENST00000544316 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
COPS7A-219ENST00000544316 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
COPS7A-219ENST00000544316 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
COPS7A-219ENST00000544316 SPAG9O60271 1321 aaKnown RBP16.81■□□□□ 0.28
COPS7A-219ENST00000544316 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-219ENST00000544316 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-219ENST00000544316 KIDINS220Q9ULH0 1771 aa16.81■□□□□ 0.28
COPS7A-219ENST00000544316 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
COPS7A-219ENST00000544316 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
COPS7A-219ENST00000544316 C3P01024 1663 aa16.78■□□□□ 0.28
COPS7A-219ENST00000544316 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
COPS7A-219ENST00000544316 SAMD9LQ8IVG5 1584 aa16.78■□□□□ 0.28
COPS7A-219ENST00000544316 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
COPS7A-219ENST00000544316 PTPRTO14522 1441 aa16.77■□□□□ 0.27
COPS7A-219ENST00000544316 NPATQ14207 1427 aa16.77■□□□□ 0.27
COPS7A-219ENST00000544316 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
COPS7A-219ENST00000544316 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
COPS7A-219ENST00000544316 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.27
COPS7A-219ENST00000544316 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
COPS7A-219ENST00000544316 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
COPS7A-219ENST00000544316 ATP7AQ04656 1500 aa16.72■□□□□ 0.27
COPS7A-219ENST00000544316 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
COPS7A-219ENST00000544316 A2MP01023 1474 aa16.7■□□□□ 0.26
COPS7A-219ENST00000544316 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
COPS7A-219ENST00000544316 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
COPS7A-219ENST00000544316 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-219ENST00000544316 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
COPS7A-219ENST00000544316 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
COPS7A-219ENST00000544316 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
COPS7A-219ENST00000544316 PLXNC1O60486 1568 aa16.67■□□□□ 0.26
COPS7A-219ENST00000544316 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
COPS7A-219ENST00000544316 PKD2Q13563 968 aa16.66■□□□□ 0.26
COPS7A-219ENST00000544316 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
COPS7A-219ENST00000544316 GGT6Q6P531 493 aa16.66■□□□□ 0.26
COPS7A-219ENST00000544316 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
COPS7A-219ENST00000544316 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
COPS7A-219ENST00000544316 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
COPS7A-219ENST00000544316 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
COPS7A-219ENST00000544316 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
COPS7A-219ENST00000544316 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
COPS7A-219ENST00000544316 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
COPS7A-219ENST00000544316 PTPRKQ15262 1439 aa16.6■□□□□ 0.25
COPS7A-219ENST00000544316 ZNF142P52746 1687 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-219ENST00000544316 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-219ENST00000544316 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
COPS7A-219ENST00000544316 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
COPS7A-219ENST00000544316 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.24
COPS7A-219ENST00000544316 LTBP4Q8N2S1 1624 aa16.58■□□□□ 0.24
COPS7A-219ENST00000544316 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
COPS7A-219ENST00000544316 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-219ENST00000544316 NCOA2Q15596 1464 aa16.55■□□□□ 0.24
COPS7A-219ENST00000544316 NCKAP5LQ9HCH0 1330 aa16.55■□□□□ 0.24
COPS7A-219ENST00000544316 KIF3BO15066 747 aa16.55■□□□□ 0.24
COPS7A-219ENST00000544316 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
COPS7A-219ENST00000544316 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
COPS7A-219ENST00000544316 WASHC2CQ9Y4E1 1318 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms