RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ABCC10Q5T3U5 1492 aa21.67■■□□□ 1.06
CHFR-223ENST00000544268 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
CHFR-223ENST00000544268 KDM5BQ9UGL1 1544 aa21.66■■□□□ 1.06
CHFR-223ENST00000544268 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
CHFR-223ENST00000544268 SETD5Q9C0A6 1442 aa21.64■■□□□ 1.05
CHFR-223ENST00000544268 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
CHFR-223ENST00000544268 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.05
CHFR-223ENST00000544268 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
CHFR-223ENST00000544268 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
CHFR-223ENST00000544268 CDC42BPAQ5VT25 1732 aa21.61■■□□□ 1.05
CHFR-223ENST00000544268 ZNF777Q9ULD5 760 aaPredicted RBP21.58■■□□□ 1.04
CHFR-223ENST00000544268 CAMSAP2Q08AD1 1489 aa21.57■■□□□ 1.04
CHFR-223ENST00000544268 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
CHFR-223ENST00000544268 KCNH8Q96L42 1107 aa21.56■■□□□ 1.04
CHFR-223ENST00000544268 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
CHFR-223ENST00000544268 TTC37Q6PGP7 1564 aa21.55■■□□□ 1.04
CHFR-223ENST00000544268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.54■■□□□ 1.04
CHFR-223ENST00000544268 DAPK1P53355 1430 aa21.54■■□□□ 1.04
CHFR-223ENST00000544268 DNMT1P26358 1616 aaKnown RBP21.54■■□□□ 1.04
CHFR-223ENST00000544268 ANP32EQ9BTT0 268 aa21.54■■□□□ 1.04
CHFR-223ENST00000544268 ABCC5O15440 1437 aa21.53■■□□□ 1.04
CHFR-223ENST00000544268 NAIPQ13075 1403 aa21.52■■□□□ 1.04
CHFR-223ENST00000544268 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
CHFR-223ENST00000544268 CDC42BPBQ9Y5S2 1711 aa21.5■■□□□ 1.03
CHFR-223ENST00000544268 PREX2Q70Z35 1606 aa21.5■■□□□ 1.03
CHFR-223ENST00000544268 RIMBP3CA6NJZ7 1639 aa21.48■■□□□ 1.03
CHFR-223ENST00000544268 RIMBP3BA6NNM3 1639 aa21.48■■□□□ 1.03
CHFR-223ENST00000544268 RIMBP3Q9UFD9 1639 aa21.48■■□□□ 1.03
CHFR-223ENST00000544268 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
CHFR-223ENST00000544268 HIRIP3Q9BW71 556 aaPredicted RBP21.46■■□□□ 1.03
CHFR-223ENST00000544268 AKNAQ7Z591 1439 aa21.46■■□□□ 1.03
CHFR-223ENST00000544268 MYO5CQ9NQX4 1742 aa21.44■■□□□ 1.02
CHFR-223ENST00000544268 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
CHFR-223ENST00000544268 SAMD9LQ8IVG5 1584 aa21.43■■□□□ 1.02
CHFR-223ENST00000544268 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
CHFR-223ENST00000544268 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
CHFR-223ENST00000544268 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
CHFR-223ENST00000544268 CROCC2H7BZ55 1655 aa21.42■■□□□ 1.02
CHFR-223ENST00000544268 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
CHFR-223ENST00000544268 HNRNPMP52272 730 aaKnown RBP eCLIP21.41■■□□□ 1.02
CHFR-223ENST00000544268 PLCH2O75038 1416 aa21.4■■□□□ 1.02
CHFR-223ENST00000544268 KDM6BO15054 1643 aa21.39■■□□□ 1.02
CHFR-223ENST00000544268 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
CHFR-223ENST00000544268 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
CHFR-223ENST00000544268 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
CHFR-223ENST00000544268 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
CHFR-223ENST00000544268 ADGBQ8N7X0 1667 aa21.36■■□□□ 1.01
CHFR-223ENST00000544268 SYCP2Q9BX26 1530 aa21.35■■□□□ 1.01
CHFR-223ENST00000544268 ADGRL2O95490 1459 aa21.35■■□□□ 1.01
CHFR-223ENST00000544268 SUPT16HQ9Y5B9 1047 aaKnown RBP21.34■■□□□ 1.01
CHFR-223ENST00000544268 SHANK2Q9UPX8 1470 aa21.34■■□□□ 1.01
CHFR-223ENST00000544268 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
CHFR-223ENST00000544268 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1
CHFR-223ENST00000544268 EFCAB2Q5VUJ9 269 aa21.33■■□□□ 1
CHFR-223ENST00000544268 TSHZ2Q9NRE2 1034 aa21.32■■□□□ 1
CHFR-223ENST00000544268 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
CHFR-223ENST00000544268 TSPY4P0CV99 314 aa21.31■■□□□ 1
CHFR-223ENST00000544268 TSPY10P0CW01 314 aa21.31■■□□□ 1
CHFR-223ENST00000544268 DDX10Q13206 875 aaKnown RBP21.31■■□□□ 1
CHFR-223ENST00000544268 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
CHFR-223ENST00000544268 KIAA1107Q9UPP5 1409 aa21.3■■□□□ 1
CHFR-223ENST00000544268 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
CHFR-223ENST00000544268 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
CHFR-223ENST00000544268 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
CHFR-223ENST00000544268 RSPH4AQ5TD94 716 aa21.28■■□□□ 1
CHFR-223ENST00000544268 TRIM52Q96A61 297 aa21.28■■□□□ 1
CHFR-223ENST00000544268 ABCC1P33527 1531 aa21.26■□□□□ 0.99
CHFR-223ENST00000544268 PPP1R15AO75807 674 aaPredicted RBP21.25■□□□□ 0.99
CHFR-223ENST00000544268 FANCAO15360 1455 aa21.24■□□□□ 0.99
CHFR-223ENST00000544268 KIF15Q9NS87 1388 aa21.22■□□□□ 0.99
CHFR-223ENST00000544268 ANKRD50Q9ULJ7 1429 aa21.22■□□□□ 0.99
CHFR-223ENST00000544268 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
CHFR-223ENST00000544268 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
CHFR-223ENST00000544268 MAST1Q9Y2H9 1570 aa21.2■□□□□ 0.99
CHFR-223ENST00000544268 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
CHFR-223ENST00000544268 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
CHFR-223ENST00000544268 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
CHFR-223ENST00000544268 TONSLQ96HA7 1378 aa21.15■□□□□ 0.98
CHFR-223ENST00000544268 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
CHFR-223ENST00000544268 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
CHFR-223ENST00000544268 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
CHFR-223ENST00000544268 FOXD1Q16676 465 aa21.12■□□□□ 0.97
CHFR-223ENST00000544268 PZPP20742 1482 aa21.12■□□□□ 0.97
CHFR-223ENST00000544268 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
CHFR-223ENST00000544268 SPAG9O60271 1321 aaKnown RBP21.1■□□□□ 0.97
CHFR-223ENST00000544268 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
CHFR-223ENST00000544268 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
CHFR-223ENST00000544268 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
CHFR-223ENST00000544268 NUP155O75694 1391 aa21.06■□□□□ 0.96
CHFR-223ENST00000544268 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
CHFR-223ENST00000544268 RTEL1-TNFRSF6BF6WH68 1400 aa21.06■□□□□ 0.96
CHFR-223ENST00000544268 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
CHFR-223ENST00000544268 MAP3K4Q9Y6R4 1608 aa21.05■□□□□ 0.96
CHFR-223ENST00000544268 GLI2P10070 1586 aa21.04■□□□□ 0.96
CHFR-223ENST00000544268 INO80Q9ULG1 1556 aaPredicted RBP21.03■□□□□ 0.96
CHFR-223ENST00000544268 ATP7AQ04656 1500 aa21.03■□□□□ 0.96
CHFR-223ENST00000544268 KDM5DQ9BY66 1539 aa21.03■□□□□ 0.96
CHFR-223ENST00000544268 ANKRD30BQ9BXX2 1392 aa21.02■□□□□ 0.96
CHFR-223ENST00000544268 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
CHFR-223ENST00000544268 FAM69CQ0P6D2 419 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms