RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
HCFC2-202ENST00000544223 TRIM52Q96A61 297 aa20.05■□□□□ 0.8
HCFC2-202ENST00000544223 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
HCFC2-202ENST00000544223 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
HCFC2-202ENST00000544223 FOXD1Q16676 465 aa20.03■□□□□ 0.8
HCFC2-202ENST00000544223 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
HCFC2-202ENST00000544223 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
HCFC2-202ENST00000544223 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
HCFC2-202ENST00000544223 ZCCHC11Q5TAX3 1644 aaKnown RBP20■□□□□ 0.79
HCFC2-202ENST00000544223 TTC37Q6PGP7 1564 aa19.99■□□□□ 0.79
HCFC2-202ENST00000544223 CDC42BPBQ9Y5S2 1711 aa19.95■□□□□ 0.78
HCFC2-202ENST00000544223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.95■□□□□ 0.78
HCFC2-202ENST00000544223 ZNF316A6NFI3 1004 aaPredicted RBP19.95■□□□□ 0.78
HCFC2-202ENST00000544223 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
HCFC2-202ENST00000544223 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
HCFC2-202ENST00000544223 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
HCFC2-202ENST00000544223 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
HCFC2-202ENST00000544223 KDM5BQ9UGL1 1544 aa19.9■□□□□ 0.78
HCFC2-202ENST00000544223 SAMD9LQ8IVG5 1584 aa19.89■□□□□ 0.78
HCFC2-202ENST00000544223 ARHGAP5Q13017 1502 aa19.89■□□□□ 0.78
HCFC2-202ENST00000544223 NCOA1Q15788 1441 aa19.88■□□□□ 0.77
HCFC2-202ENST00000544223 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
HCFC2-202ENST00000544223 PREX2Q70Z35 1606 aa19.87■□□□□ 0.77
HCFC2-202ENST00000544223 UHRF1BP1LA0JNW5 1464 aa19.86■□□□□ 0.77
HCFC2-202ENST00000544223 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
HCFC2-202ENST00000544223 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
HCFC2-202ENST00000544223 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
HCFC2-202ENST00000544223 TSPY4P0CV99 314 aa19.84■□□□□ 0.77
HCFC2-202ENST00000544223 TSPY10P0CW01 314 aa19.84■□□□□ 0.77
HCFC2-202ENST00000544223 HIRIP3Q9BW71 556 aaPredicted RBP19.84■□□□□ 0.77
HCFC2-202ENST00000544223 C9orf84Q5VXU9 1444 aa19.84■□□□□ 0.77
HCFC2-202ENST00000544223 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
HCFC2-202ENST00000544223 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
HCFC2-202ENST00000544223 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
HCFC2-202ENST00000544223 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
HCFC2-202ENST00000544223 ARHGEF12Q9NZN5 1544 aa19.8■□□□□ 0.76
HCFC2-202ENST00000544223 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
HCFC2-202ENST00000544223 ADGBQ8N7X0 1667 aa19.8■□□□□ 0.76
HCFC2-202ENST00000544223 ASXL2Q76L83 1435 aa19.78■□□□□ 0.76
HCFC2-202ENST00000544223 ANKRD50Q9ULJ7 1429 aa19.77■□□□□ 0.75
HCFC2-202ENST00000544223 WDR7Q9Y4E6 1490 aa19.76■□□□□ 0.75
HCFC2-202ENST00000544223 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
HCFC2-202ENST00000544223 KIF15Q9NS87 1388 aa19.76■□□□□ 0.75
HCFC2-202ENST00000544223 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
HCFC2-202ENST00000544223 PLCH2O75038 1416 aa19.75■□□□□ 0.75
HCFC2-202ENST00000544223 ADGRL2O95490 1459 aa19.75■□□□□ 0.75
HCFC2-202ENST00000544223 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
HCFC2-202ENST00000544223 NPM1P06748 294 aaKnown RBP eCLIP19.74■□□□□ 0.75
HCFC2-202ENST00000544223 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
HCFC2-202ENST00000544223 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
HCFC2-202ENST00000544223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
HCFC2-202ENST00000544223 TRAPPC8Q9Y2L5 1435 aa19.72■□□□□ 0.75
HCFC2-202ENST00000544223 PZPP20742 1482 aa19.72■□□□□ 0.75
HCFC2-202ENST00000544223 PKD2Q13563 968 aa19.71■□□□□ 0.75
HCFC2-202ENST00000544223 NUP155O75694 1391 aa19.7■□□□□ 0.74
HCFC2-202ENST00000544223 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
HCFC2-202ENST00000544223 SHANK2Q9UPX8 1470 aa19.69■□□□□ 0.74
HCFC2-202ENST00000544223 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
HCFC2-202ENST00000544223 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
HCFC2-202ENST00000544223 MIER1Q8N108 512 aa19.66■□□□□ 0.74
HCFC2-202ENST00000544223 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
HCFC2-202ENST00000544223 FANCAO15360 1455 aa19.64■□□□□ 0.73
HCFC2-202ENST00000544223 ABCC1P33527 1531 aa19.63■□□□□ 0.73
HCFC2-202ENST00000544223 PLEKHH2Q8IVE3 1493 aa19.62■□□□□ 0.73
HCFC2-202ENST00000544223 KIAA1107Q9UPP5 1409 aa19.61■□□□□ 0.73
HCFC2-202ENST00000544223 RSPH4AQ5TD94 716 aa19.61■□□□□ 0.73
HCFC2-202ENST00000544223 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
HCFC2-202ENST00000544223 RIMBP3CA6NJZ7 1639 aa19.6■□□□□ 0.73
HCFC2-202ENST00000544223 RIMBP3BA6NNM3 1639 aa19.6■□□□□ 0.73
HCFC2-202ENST00000544223 RIMBP3Q9UFD9 1639 aa19.6■□□□□ 0.73
HCFC2-202ENST00000544223 SPAG9O60271 1321 aaKnown RBP19.59■□□□□ 0.73
HCFC2-202ENST00000544223 TIMELESSQ9UNS1 1208 aa19.59■□□□□ 0.73
HCFC2-202ENST00000544223 SCAPERQ9BY12 1400 aa19.58■□□□□ 0.72
HCFC2-202ENST00000544223 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
HCFC2-202ENST00000544223 ADGRL1O94910 1474 aa19.56■□□□□ 0.72
HCFC2-202ENST00000544223 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
HCFC2-202ENST00000544223 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
HCFC2-202ENST00000544223 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
HCFC2-202ENST00000544223 MAST1Q9Y2H9 1570 aa19.53■□□□□ 0.72
HCFC2-202ENST00000544223 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
HCFC2-202ENST00000544223 DDX10Q13206 875 aaKnown RBP19.52■□□□□ 0.72
HCFC2-202ENST00000544223 FAM135AQ9P2D6 1515 aa19.52■□□□□ 0.71
HCFC2-202ENST00000544223 RAPGEF3O95398 923 aa19.51■□□□□ 0.71
HCFC2-202ENST00000544223 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
HCFC2-202ENST00000544223 ZFYVE16Q7Z3T8 1539 aa19.49■□□□□ 0.71
HCFC2-202ENST00000544223 KDM2AQ9Y2K7 1162 aa19.49■□□□□ 0.71
HCFC2-202ENST00000544223 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
HCFC2-202ENST00000544223 ARAP3Q8WWN8 1544 aa19.47■□□□□ 0.71
HCFC2-202ENST00000544223 DUOX2Q9NRD8 1548 aa19.47■□□□□ 0.71
HCFC2-202ENST00000544223 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
HCFC2-202ENST00000544223 KIF3BO15066 747 aa19.46■□□□□ 0.71
HCFC2-202ENST00000544223 ATP7AQ04656 1500 aa19.45■□□□□ 0.7
HCFC2-202ENST00000544223 KDM5DQ9BY66 1539 aa19.44■□□□□ 0.7
HCFC2-202ENST00000544223 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
HCFC2-202ENST00000544223 HSPA5P11021 654 aaKnown RBP19.44■□□□□ 0.7
HCFC2-202ENST00000544223 UNC13BO14795 1591 aa19.42■□□□□ 0.7
HCFC2-202ENST00000544223 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
HCFC2-202ENST00000544223 ERBINQ96RT1 1412 aa19.4■□□□□ 0.7
HCFC2-202ENST00000544223 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
HCFC2-202ENST00000544223 TSPOAP1O95153 1857 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms