RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-218ENST00000543654 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
NPIPB4-218ENST00000543654 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
NPIPB4-218ENST00000543654 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
NPIPB4-218ENST00000543654 CLASP1Q7Z460 1538 aa10.1□□□□□ -0.79
NPIPB4-218ENST00000543654 SHROOM2Q13796 1616 aa10.1□□□□□ -0.79
NPIPB4-218ENST00000543654 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
NPIPB4-218ENST00000543654 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
NPIPB4-218ENST00000543654 LRRC9Q6ZRR7 1453 aa10.08□□□□□ -0.8
NPIPB4-218ENST00000543654 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
NPIPB4-218ENST00000543654 CDK11AQ9UQ88 783 aaPredicted RBP10.07□□□□□ -0.8
NPIPB4-218ENST00000543654 PTPRGP23470 1445 aa10.07□□□□□ -0.8
NPIPB4-218ENST00000543654 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
NPIPB4-218ENST00000543654 EPRSP07814 1512 aaKnown RBP10.06□□□□□ -0.8
NPIPB4-218ENST00000543654 RAPGEF6Q8TEU7 1601 aa10.05□□□□□ -0.8
NPIPB4-218ENST00000543654 EHBP1L1Q8N3D4 1523 aa10.05□□□□□ -0.8
NPIPB4-218ENST00000543654 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
NPIPB4-218ENST00000543654 KANK4Q5T7N3 995 aaPredicted RBP10.04□□□□□ -0.8
NPIPB4-218ENST00000543654 CD44P16070 742 aaKnown RBP10.03□□□□□ -0.8
NPIPB4-218ENST00000543654 NUP153P49790 1475 aaKnown RBP10.03□□□□□ -0.8
NPIPB4-218ENST00000543654 GABBR2O75899 941 aa10.02□□□□□ -0.81
NPIPB4-218ENST00000543654 ABCA8O94911 1581 aa10.01□□□□□ -0.81
NPIPB4-218ENST00000543654 UACAQ9BZF9 1416 aa10.01□□□□□ -0.81
NPIPB4-218ENST00000543654 PROM2Q8N271 834 aa10.01□□□□□ -0.81
NPIPB4-218ENST00000543654 PLB1Q6P1J6 1458 aa10.01□□□□□ -0.81
NPIPB4-218ENST00000543654 RRBP1Q9P2E9 1410 aaKnown RBP10□□□□□ -0.81
NPIPB4-218ENST00000543654 DNAJC5Q9H3Z4 198 aa10□□□□□ -0.81
NPIPB4-218ENST00000543654 CCNB3Q8WWL7 1395 aa9.99□□□□□ -0.81
NPIPB4-218ENST00000543654 UHRF1BP1LA0JNW5 1464 aa9.98□□□□□ -0.81
NPIPB4-218ENST00000543654 CDK13Q14004 1512 aaKnown RBP9.97□□□□□ -0.81
NPIPB4-218ENST00000543654 ABCC2Q92887 1545 aa9.97□□□□□ -0.81
NPIPB4-218ENST00000543654 SUPT6HQ7KZ85 1726 aaKnown RBP9.97□□□□□ -0.81
NPIPB4-218ENST00000543654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
NPIPB4-218ENST00000543654 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
NPIPB4-218ENST00000543654 NCOA2Q15596 1464 aa9.97□□□□□ -0.81
NPIPB4-218ENST00000543654 PLEKHD1A6NEE1 506 aa9.96□□□□□ -0.82
NPIPB4-218ENST00000543654 MYOM3Q5VTT5 1437 aa9.96□□□□□ -0.82
NPIPB4-218ENST00000543654 PHLDB1Q86UU1 1377 aa9.95□□□□□ -0.82
NPIPB4-218ENST00000543654 ARHGEF11O15085 1522 aa9.94□□□□□ -0.82
NPIPB4-218ENST00000543654 ATP10BO94823 1461 aa9.94□□□□□ -0.82
NPIPB4-218ENST00000543654 MIA2Q96PC5 1412 aa9.94□□□□□ -0.82
NPIPB4-218ENST00000543654 ERCC6L2Q5T890 1561 aa9.93□□□□□ -0.82
NPIPB4-218ENST00000543654 FGD6Q6ZV73 1430 aa9.93□□□□□ -0.82
NPIPB4-218ENST00000543654 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
NPIPB4-218ENST00000543654 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
NPIPB4-218ENST00000543654 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
NPIPB4-218ENST00000543654 MAGI3Q5TCQ9 1506 aa9.92□□□□□ -0.82
NPIPB4-218ENST00000543654 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
NPIPB4-218ENST00000543654 KIF14Q15058 1648 aa9.91□□□□□ -0.82
NPIPB4-218ENST00000543654 KDM5BQ9UGL1 1544 aa9.91□□□□□ -0.82
NPIPB4-218ENST00000543654 FAM50AQ14320 339 aaKnown RBP9.9□□□□□ -0.82
NPIPB4-218ENST00000543654 ADCY10Q96PN6 1610 aa9.89□□□□□ -0.83
NPIPB4-218ENST00000543654 NPM1P06748 294 aaKnown RBP eCLIP9.88□□□□□ -0.83
NPIPB4-218ENST00000543654 TCOF1Q13428 1488 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-218ENST00000543654 FKBP8Q14318 412 aa9.86□□□□□ -0.83
NPIPB4-218ENST00000543654 ITSN2Q9NZM3 1697 aa9.86□□□□□ -0.83
NPIPB4-218ENST00000543654 ZEB1P37275 1124 aaPredicted RBP9.85□□□□□ -0.83
NPIPB4-218ENST00000543654 ZNF579Q8NAF0 562 aaKnown RBP9.85□□□□□ -0.83
NPIPB4-218ENST00000543654 CFDP1Q9UEE9 299 aaPredicted RBP9.85□□□□□ -0.83
NPIPB4-218ENST00000543654 PTPN23Q9H3S7 1636 aa9.85□□□□□ -0.83
NPIPB4-218ENST00000543654 GPATCH8Q9UKJ3 1502 aaKnown RBP9.84□□□□□ -0.83
NPIPB4-218ENST00000543654 ZCCHC11Q5TAX3 1644 aaKnown RBP9.84□□□□□ -0.83
NPIPB4-218ENST00000543654 ABCC10Q5T3U5 1492 aa9.84□□□□□ -0.83
NPIPB4-218ENST00000543654 WDR7Q9Y4E6 1490 aa9.84□□□□□ -0.83
NPIPB4-218ENST00000543654 ACIN1Q9UKV3 1341 aaKnown RBP9.83□□□□□ -0.84
NPIPB4-218ENST00000543654 POTEIP0CG38 1075 aa9.83□□□□□ -0.84
NPIPB4-218ENST00000543654 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
NPIPB4-218ENST00000543654 PLEKHH2Q8IVE3 1493 aa9.81□□□□□ -0.84
NPIPB4-218ENST00000543654 ITGAEP38570 1179 aa9.81□□□□□ -0.84
NPIPB4-218ENST00000543654 CAMSAP2Q08AD1 1489 aa9.8□□□□□ -0.84
NPIPB4-218ENST00000543654 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
NPIPB4-218ENST00000543654 HRCP23327 699 aa9.8□□□□□ -0.84
NPIPB4-218ENST00000543654 CCER1Q8TC90 406 aaPredicted RBP9.8□□□□□ -0.84
NPIPB4-218ENST00000543654 PHF12Q96QT6 1004 aa9.8□□□□□ -0.84
NPIPB4-218ENST00000543654 SETD5Q9C0A6 1442 aa9.8□□□□□ -0.84
NPIPB4-218ENST00000543654 ARAP3Q8WWN8 1544 aa9.79□□□□□ -0.84
NPIPB4-218ENST00000543654 CLCN6P51797 869 aa9.79□□□□□ -0.84
NPIPB4-218ENST00000543654 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
NPIPB4-218ENST00000543654 MIER1Q8N108 512 aa9.79□□□□□ -0.84
NPIPB4-218ENST00000543654 HFM1A2PYH4 1435 aa9.79□□□□□ -0.84
NPIPB4-218ENST00000543654 ASXL2Q76L83 1435 aa9.79□□□□□ -0.84
NPIPB4-218ENST00000543654 ROCK1Q13464 1354 aa9.78□□□□□ -0.84
NPIPB4-218ENST00000543654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.78□□□□□ -0.84
NPIPB4-218ENST00000543654 CLSPNQ9HAW4 1339 aa9.78□□□□□ -0.84
NPIPB4-218ENST00000543654 PREX2Q70Z35 1606 aa9.78□□□□□ -0.84
NPIPB4-218ENST00000543654 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.84
NPIPB4-218ENST00000543654 PLCH2O75038 1416 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 DAPK1P53355 1430 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 KCNH8Q96L42 1107 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 ZNF777Q9ULD5 760 aaPredicted RBP9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 RIMBP3CA6NJZ7 1639 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 RIMBP3BA6NNM3 1639 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 RIMBP3Q9UFD9 1639 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 SHANK2Q9UPX8 1470 aa9.77□□□□□ -0.85
NPIPB4-218ENST00000543654 KIAA1107Q9UPP5 1409 aa9.76□□□□□ -0.85
NPIPB4-218ENST00000543654 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
NPIPB4-218ENST00000543654 EFCAB2Q5VUJ9 269 aa9.76□□□□□ -0.85
NPIPB4-218ENST00000543654 MAPKBP1O60336 1514 aa9.76□□□□□ -0.85
NPIPB4-218ENST00000543654 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
NPIPB4-218ENST00000543654 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms