RNA–Protein interactions for RNA: ENST00000543134.5

SEC23IP-208, Transcript of SEC23 interacting protein, humanhuman

TSL 5 BASIC

Gene SEC23IP, Length 1,461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-208ENST00000543134 PCF11O94913 1555 aaKnown RBP11.22□□□□□ -0.61
SEC23IP-208ENST00000543134 PTPRMP28827 1452 aa11.22□□□□□ -0.61
SEC23IP-208ENST00000543134 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
SEC23IP-208ENST00000543134 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.62
SEC23IP-208ENST00000543134 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
SEC23IP-208ENST00000543134 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
SEC23IP-208ENST00000543134 KDM5BQ9UGL1 1544 aa11.19□□□□□ -0.62
SEC23IP-208ENST00000543134 CASKIN1Q8WXD9 1431 aa11.19□□□□□ -0.62
SEC23IP-208ENST00000543134 ZCCHC11Q5TAX3 1644 aaKnown RBP11.19□□□□□ -0.62
SEC23IP-208ENST00000543134 FKBP8Q14318 412 aa11.19□□□□□ -0.62
SEC23IP-208ENST00000543134 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
SEC23IP-208ENST00000543134 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
SEC23IP-208ENST00000543134 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
SEC23IP-208ENST00000543134 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
SEC23IP-208ENST00000543134 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
SEC23IP-208ENST00000543134 APLP2Q06481 763 aa11.18□□□□□ -0.62
SEC23IP-208ENST00000543134 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
SEC23IP-208ENST00000543134 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
SEC23IP-208ENST00000543134 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
SEC23IP-208ENST00000543134 MAGI3Q5TCQ9 1506 aa11.17□□□□□ -0.62
SEC23IP-208ENST00000543134 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
SEC23IP-208ENST00000543134 LRRIQ1Q96JM4 1722 aa11.16□□□□□ -0.62
SEC23IP-208ENST00000543134 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
SEC23IP-208ENST00000543134 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
SEC23IP-208ENST00000543134 ADAMTSL3P82987 1691 aa11.15□□□□□ -0.62
SEC23IP-208ENST00000543134 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
SEC23IP-208ENST00000543134 HOMEZQ8IX15 550 aa11.15□□□□□ -0.62
SEC23IP-208ENST00000543134 KCNH8Q96L42 1107 aa11.13□□□□□ -0.63
SEC23IP-208ENST00000543134 POTEDQ86YR6 584 aa11.12□□□□□ -0.63
SEC23IP-208ENST00000543134 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
SEC23IP-208ENST00000543134 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
SEC23IP-208ENST00000543134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
SEC23IP-208ENST00000543134 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
SEC23IP-208ENST00000543134 MADDQ8WXG6 1647 aa11.1□□□□□ -0.63
SEC23IP-208ENST00000543134 HSPA2P54652 639 aa11.1□□□□□ -0.63
SEC23IP-208ENST00000543134 BCORL1Q5H9F3 1711 aa11.1□□□□□ -0.63
SEC23IP-208ENST00000543134 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
SEC23IP-208ENST00000543134 PHLDB1Q86UU1 1377 aa11.08□□□□□ -0.64
SEC23IP-208ENST00000543134 HECW1Q76N89 1606 aa11.08□□□□□ -0.64
SEC23IP-208ENST00000543134 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
SEC23IP-208ENST00000543134 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
SEC23IP-208ENST00000543134 CCDC18Q5T9S5 1454 aa11.06□□□□□ -0.64
SEC23IP-208ENST00000543134 RAPGEF6Q8TEU7 1601 aa11.06□□□□□ -0.64
SEC23IP-208ENST00000543134 RRBP1Q9P2E9 1410 aaKnown RBP11.05□□□□□ -0.64
SEC23IP-208ENST00000543134 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
SEC23IP-208ENST00000543134 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
SEC23IP-208ENST00000543134 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
SEC23IP-208ENST00000543134 ATP1B4Q9UN42 357 aaPredicted RBP11.03□□□□□ -0.64
SEC23IP-208ENST00000543134 NUP153P49790 1475 aaKnown RBP11.03□□□□□ -0.64
SEC23IP-208ENST00000543134 ABCA8O94911 1581 aa11.02□□□□□ -0.65
SEC23IP-208ENST00000543134 RAPGEF3O95398 923 aa11.01□□□□□ -0.65
SEC23IP-208ENST00000543134 EHBP1L1Q8N3D4 1523 aa11□□□□□ -0.65
SEC23IP-208ENST00000543134 SUPT6HQ7KZ85 1726 aaKnown RBP11□□□□□ -0.65
SEC23IP-208ENST00000543134 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
SEC23IP-208ENST00000543134 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
SEC23IP-208ENST00000543134 FANCAO15360 1455 aa10.98□□□□□ -0.65
SEC23IP-208ENST00000543134 NEO1Q92859 1461 aa10.98□□□□□ -0.65
SEC23IP-208ENST00000543134 MTUS2Q5JR59 1369 aa10.98□□□□□ -0.65
SEC23IP-208ENST00000543134 CCNB3Q8WWL7 1395 aa10.98□□□□□ -0.65
SEC23IP-208ENST00000543134 HRCP23327 699 aa10.97□□□□□ -0.65
SEC23IP-208ENST00000543134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.97□□□□□ -0.65
SEC23IP-208ENST00000543134 ARHGEF40Q8TER5 1519 aa10.96□□□□□ -0.65
SEC23IP-208ENST00000543134 YEATS2Q9ULM3 1422 aa10.96□□□□□ -0.66
SEC23IP-208ENST00000543134 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
SEC23IP-208ENST00000543134 ABCA9Q8IUA7 1624 aa10.95□□□□□ -0.66
SEC23IP-208ENST00000543134 AKNAQ7Z591 1439 aa10.94□□□□□ -0.66
SEC23IP-208ENST00000543134 PREX1Q8TCU6 1659 aa10.94□□□□□ -0.66
SEC23IP-208ENST00000543134 FER1L4A9Z1Z3 1794 aa10.94□□□□□ -0.66
SEC23IP-208ENST00000543134 ATP10BO94823 1461 aa10.94□□□□□ -0.66
SEC23IP-208ENST00000543134 MLECQ14165 292 aa10.93□□□□□ -0.66
SEC23IP-208ENST00000543134 CDK11AQ9UQ88 783 aaPredicted RBP10.93□□□□□ -0.66
SEC23IP-208ENST00000543134 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
SEC23IP-208ENST00000543134 FGD6Q6ZV73 1430 aa10.92□□□□□ -0.66
SEC23IP-208ENST00000543134 ARID3CA6NKF2 412 aa10.92□□□□□ -0.66
SEC23IP-208ENST00000543134 FRMPD1Q5SYB0 1578 aa10.92□□□□□ -0.66
SEC23IP-208ENST00000543134 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
SEC23IP-208ENST00000543134 DENND4BO75064 1496 aaPredicted RBP10.91□□□□□ -0.66
SEC23IP-208ENST00000543134 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
SEC23IP-208ENST00000543134 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
SEC23IP-208ENST00000543134 TTC37Q6PGP7 1564 aa10.9□□□□□ -0.66
SEC23IP-208ENST00000543134 IQSEC2Q5JU85 1478 aa10.9□□□□□ -0.66
SEC23IP-208ENST00000543134 UHRF1BP1Q6BDS2 1440 aa10.89□□□□□ -0.67
SEC23IP-208ENST00000543134 MIA2Q96PC5 1412 aa10.89□□□□□ -0.67
SEC23IP-208ENST00000543134 SETD1BQ9UPS6 1966 aaKnown RBP10.89□□□□□ -0.67
SEC23IP-208ENST00000543134 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
SEC23IP-208ENST00000543134 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
SEC23IP-208ENST00000543134 STRCQ7RTU9 1775 aa10.88□□□□□ -0.67
SEC23IP-208ENST00000543134 ZFYVE16Q7Z3T8 1539 aa10.88□□□□□ -0.67
SEC23IP-208ENST00000543134 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
SEC23IP-208ENST00000543134 RICTORQ6R327 1708 aa10.87□□□□□ -0.67
SEC23IP-208ENST00000543134 PTPRTO14522 1441 aa10.87□□□□□ -0.67
SEC23IP-208ENST00000543134 KIF14Q15058 1648 aa10.86□□□□□ -0.67
SEC23IP-208ENST00000543134 PLEKHD1A6NEE1 506 aa10.86□□□□□ -0.67
SEC23IP-208ENST00000543134 UBAP1LF5GYI3 381 aa10.85□□□□□ -0.67
SEC23IP-208ENST00000543134 ZEB1P37275 1124 aaPredicted RBP10.85□□□□□ -0.67
SEC23IP-208ENST00000543134 ITSN2Q9NZM3 1697 aa10.84□□□□□ -0.67
SEC23IP-208ENST00000543134 CDC42BPAQ5VT25 1732 aa10.84□□□□□ -0.67
SEC23IP-208ENST00000543134 MAGI2Q86UL8 1455 aa10.84□□□□□ -0.67
SEC23IP-208ENST00000543134 ZMYM4Q5VZL5 1548 aa10.83□□□□□ -0.68
SEC23IP-208ENST00000543134 GPATCH8Q9UKJ3 1502 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms