RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.46
MRPL40P1-201ENST00000542687 ARHGAP5Q13017 1502 aa12.12□□□□□ -0.47
MRPL40P1-201ENST00000542687 RSPH4AQ5TD94 716 aa12.12□□□□□ -0.47
MRPL40P1-201ENST00000542687 AEBP2Q6ZN18 517 aaPredicted RBP12.12□□□□□ -0.47
MRPL40P1-201ENST00000542687 TTC37Q6PGP7 1564 aa12.12□□□□□ -0.47
MRPL40P1-201ENST00000542687 HNRNPMP52272 730 aaKnown RBP eCLIP12.11□□□□□ -0.47
MRPL40P1-201ENST00000542687 GLI2P10070 1586 aa12.1□□□□□ -0.47
MRPL40P1-201ENST00000542687 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
MRPL40P1-201ENST00000542687 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
MRPL40P1-201ENST00000542687 TSPY4P0CV99 314 aa12.09□□□□□ -0.47
MRPL40P1-201ENST00000542687 TSPY10P0CW01 314 aa12.09□□□□□ -0.47
MRPL40P1-201ENST00000542687 ARAP3Q8WWN8 1544 aa12.09□□□□□ -0.47
MRPL40P1-201ENST00000542687 FANCAO15360 1455 aa12.08□□□□□ -0.47
MRPL40P1-201ENST00000542687 PLEKHH2Q8IVE3 1493 aa12.08□□□□□ -0.47
MRPL40P1-201ENST00000542687 KDM6BO15054 1643 aa12.08□□□□□ -0.48
MRPL40P1-201ENST00000542687 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
MRPL40P1-201ENST00000542687 KIAA1107Q9UPP5 1409 aa12.08□□□□□ -0.48
MRPL40P1-201ENST00000542687 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
MRPL40P1-201ENST00000542687 AKNAQ7Z591 1439 aa12.07□□□□□ -0.48
MRPL40P1-201ENST00000542687 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
MRPL40P1-201ENST00000542687 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
MRPL40P1-201ENST00000542687 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
MRPL40P1-201ENST00000542687 PREX2Q70Z35 1606 aa12.05□□□□□ -0.48
MRPL40P1-201ENST00000542687 NEO1Q92859 1461 aa12.05□□□□□ -0.48
MRPL40P1-201ENST00000542687 ABCC5O15440 1437 aa12.04□□□□□ -0.48
MRPL40P1-201ENST00000542687 SCAPERQ9BY12 1400 aa12.04□□□□□ -0.48
MRPL40P1-201ENST00000542687 TEX14Q8IWB6 1497 aa12.04□□□□□ -0.48
MRPL40P1-201ENST00000542687 CDC42BPAQ5VT25 1732 aa12.04□□□□□ -0.48
MRPL40P1-201ENST00000542687 DAPK1P53355 1430 aa12.03□□□□□ -0.48
MRPL40P1-201ENST00000542687 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
MRPL40P1-201ENST00000542687 ADGRL1O94910 1474 aa12.03□□□□□ -0.48
MRPL40P1-201ENST00000542687 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
MRPL40P1-201ENST00000542687 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
MRPL40P1-201ENST00000542687 SAMD9LQ8IVG5 1584 aa12.02□□□□□ -0.49
MRPL40P1-201ENST00000542687 MAP3K4Q9Y6R4 1608 aa12.02□□□□□ -0.49
MRPL40P1-201ENST00000542687 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
MRPL40P1-201ENST00000542687 CDC42BPBQ9Y5S2 1711 aa12.02□□□□□ -0.49
MRPL40P1-201ENST00000542687 PTPRKQ15262 1439 aa12.02□□□□□ -0.49
MRPL40P1-201ENST00000542687 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
MRPL40P1-201ENST00000542687 SPAG9O60271 1321 aaKnown RBP12.01□□□□□ -0.49
MRPL40P1-201ENST00000542687 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
MRPL40P1-201ENST00000542687 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
MRPL40P1-201ENST00000542687 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
MRPL40P1-201ENST00000542687 RAPGEF3O95398 923 aa12□□□□□ -0.49
MRPL40P1-201ENST00000542687 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
MRPL40P1-201ENST00000542687 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
MRPL40P1-201ENST00000542687 ROCK1Q13464 1354 aa11.99□□□□□ -0.49
MRPL40P1-201ENST00000542687 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
MRPL40P1-201ENST00000542687 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
MRPL40P1-201ENST00000542687 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
MRPL40P1-201ENST00000542687 ABCC1P33527 1531 aa11.99□□□□□ -0.49
MRPL40P1-201ENST00000542687 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
MRPL40P1-201ENST00000542687 CFAP74Q9C0B2 1584 aa11.98□□□□□ -0.49
MRPL40P1-201ENST00000542687 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
MRPL40P1-201ENST00000542687 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
MRPL40P1-201ENST00000542687 NCOA1Q15788 1441 aa11.96□□□□□ -0.49
MRPL40P1-201ENST00000542687 POGZQ7Z3K3 1410 aa11.96□□□□□ -0.49
MRPL40P1-201ENST00000542687 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
MRPL40P1-201ENST00000542687 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
MRPL40P1-201ENST00000542687 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
MRPL40P1-201ENST00000542687 HRCP23327 699 aa11.94□□□□□ -0.5
MRPL40P1-201ENST00000542687 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
MRPL40P1-201ENST00000542687 KIF15Q9NS87 1388 aa11.93□□□□□ -0.5
MRPL40P1-201ENST00000542687 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
MRPL40P1-201ENST00000542687 NAIPQ13075 1403 aa11.93□□□□□ -0.5
MRPL40P1-201ENST00000542687 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
MRPL40P1-201ENST00000542687 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
MRPL40P1-201ENST00000542687 MLH3Q9UHC1 1453 aa11.9□□□□□ -0.5
MRPL40P1-201ENST00000542687 COL17A1Q9UMD9 1497 aaPredicted RBP11.9□□□□□ -0.5
MRPL40P1-201ENST00000542687 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
MRPL40P1-201ENST00000542687 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
MRPL40P1-201ENST00000542687 TRIM52Q96A61 297 aa11.89□□□□□ -0.51
MRPL40P1-201ENST00000542687 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
MRPL40P1-201ENST00000542687 MAGI2Q86UL8 1455 aa11.88□□□□□ -0.51
MRPL40P1-201ENST00000542687 ATP7AQ04656 1500 aa11.87□□□□□ -0.51
MRPL40P1-201ENST00000542687 KDM5CP41229 1560 aa11.87□□□□□ -0.51
MRPL40P1-201ENST00000542687 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
MRPL40P1-201ENST00000542687 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
MRPL40P1-201ENST00000542687 CROCC2H7BZ55 1655 aa11.85□□□□□ -0.51
MRPL40P1-201ENST00000542687 KIF3BO15066 747 aa11.85□□□□□ -0.51
MRPL40P1-201ENST00000542687 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
MRPL40P1-201ENST00000542687 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
MRPL40P1-201ENST00000542687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPL40P1-201ENST00000542687 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
MRPL40P1-201ENST00000542687 YEATS2Q9ULM3 1422 aa11.84□□□□□ -0.51
MRPL40P1-201ENST00000542687 A2MP01023 1474 aa11.83□□□□□ -0.52
MRPL40P1-201ENST00000542687 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
MRPL40P1-201ENST00000542687 PLXNC1O60486 1568 aa11.83□□□□□ -0.52
MRPL40P1-201ENST00000542687 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
MRPL40P1-201ENST00000542687 INO80Q9ULG1 1556 aaPredicted RBP11.83□□□□□ -0.52
MRPL40P1-201ENST00000542687 ATP10AO60312 1499 aa11.83□□□□□ -0.52
MRPL40P1-201ENST00000542687 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
MRPL40P1-201ENST00000542687 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
MRPL40P1-201ENST00000542687 NUP155O75694 1391 aa11.81□□□□□ -0.52
MRPL40P1-201ENST00000542687 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
MRPL40P1-201ENST00000542687 RICTORQ6R327 1708 aa11.8□□□□□ -0.52
MRPL40P1-201ENST00000542687 GGT6Q6P531 493 aa11.8□□□□□ -0.52
MRPL40P1-201ENST00000542687 MPHOSPH9Q99550 1183 aa11.8□□□□□ -0.52
MRPL40P1-201ENST00000542687 KIDINS220Q9ULH0 1771 aa11.79□□□□□ -0.52
MRPL40P1-201ENST00000542687 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms