RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 SIGLEC1Q9BZZ2 1709 aa20.1■□□□□ 0.81
PDE3A-202ENST00000542675 C1QBPQ07021 282 aaKnown RBP20.08■□□□□ 0.81
PDE3A-202ENST00000542675 FBXO41Q8TF61 875 aa20.08■□□□□ 0.81
PDE3A-202ENST00000542675 ARHGEF40Q8TER5 1519 aa20.07■□□□□ 0.8
PDE3A-202ENST00000542675 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
PDE3A-202ENST00000542675 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
PDE3A-202ENST00000542675 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
PDE3A-202ENST00000542675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.82e-7■■■■□ 24.5
PDE3A-202ENST00000542675 U3KPZ7 1027 aaPredicted RBP20.03■□□□□ 0.8
PDE3A-202ENST00000542675 AKNAQ7Z591 1439 aa20.02■□□□□ 0.8
PDE3A-202ENST00000542675 DENND4BO75064 1496 aaPredicted RBP20.02■□□□□ 0.8
PDE3A-202ENST00000542675 FANCAO15360 1455 aa20■□□□□ 0.79
PDE3A-202ENST00000542675 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
PDE3A-202ENST00000542675 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
PDE3A-202ENST00000542675 YEATS2Q9ULM3 1422 aa19.99■□□□□ 0.79
PDE3A-202ENST00000542675 CFAP74Q9C0B2 1584 aa19.99■□□□□ 0.79
PDE3A-202ENST00000542675 CDK13Q14004 1512 aaKnown RBP19.98■□□□□ 0.79
PDE3A-202ENST00000542675 HSPA2P54652 639 aa19.98■□□□□ 0.79
PDE3A-202ENST00000542675 HECW1Q76N89 1606 aa19.95■□□□□ 0.78
PDE3A-202ENST00000542675 ZMYM4Q5VZL5 1548 aa19.95■□□□□ 0.78
PDE3A-202ENST00000542675 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
PDE3A-202ENST00000542675 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
PDE3A-202ENST00000542675 MLECQ14165 292 aa19.92■□□□□ 0.78
PDE3A-202ENST00000542675 EEA1Q15075 1411 aa19.92■□□□□ 0.78
PDE3A-202ENST00000542675 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
PDE3A-202ENST00000542675 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
PDE3A-202ENST00000542675 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
PDE3A-202ENST00000542675 POGZQ7Z3K3 1410 aa19.87■□□□□ 0.77
PDE3A-202ENST00000542675 SCAPERQ9BY12 1400 aa19.87■□□□□ 0.77
PDE3A-202ENST00000542675 KIF14Q15058 1648 aa19.85■□□□□ 0.77
PDE3A-202ENST00000542675 PLCH2O75038 1416 aa19.85■□□□□ 0.77
PDE3A-202ENST00000542675 LRRIQ1Q96JM4 1722 aa19.84■□□□□ 0.77
PDE3A-202ENST00000542675 MAGI2Q86UL8 1455 aa19.84■□□□□ 0.77
PDE3A-202ENST00000542675 ATP1B4Q9UN42 357 aaPredicted RBP19.83■□□□□ 0.77
PDE3A-202ENST00000542675 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
PDE3A-202ENST00000542675 CEBPAP49715 358 aaPredicted RBP19.8■□□□□ 0.76
PDE3A-202ENST00000542675 PREX1Q8TCU6 1659 aa19.79■□□□□ 0.76
PDE3A-202ENST00000542675 ATP10AO60312 1499 aa19.79■□□□□ 0.76
PDE3A-202ENST00000542675 STRCQ7RTU9 1775 aa19.78■□□□□ 0.76
PDE3A-202ENST00000542675 CERKQ8TCT0 537 aa19.77■□□□□ 0.76
PDE3A-202ENST00000542675 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
PDE3A-202ENST00000542675 C9orf84Q5VXU9 1444 aa19.76■□□□□ 0.75
PDE3A-202ENST00000542675 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
PDE3A-202ENST00000542675 EFCAB2Q5VUJ9 269 aa19.75■□□□□ 0.75
PDE3A-202ENST00000542675 CDC42BPBQ9Y5S2 1711 aa19.75■□□□□ 0.75
PDE3A-202ENST00000542675 SETD1BQ9UPS6 1966 aaKnown RBP19.74■□□□□ 0.75
PDE3A-202ENST00000542675 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
PDE3A-202ENST00000542675 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
PDE3A-202ENST00000542675 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
PDE3A-202ENST00000542675 KDM5CP41229 1560 aa19.71■□□□□ 0.75
PDE3A-202ENST00000542675 DIP2CQ9Y2E4 1556 aa19.71■□□□□ 0.75
PDE3A-202ENST00000542675 ABCA6Q8N139 1617 aa19.7■□□□□ 0.74
PDE3A-202ENST00000542675 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
PDE3A-202ENST00000542675 C3P01024 1663 aa19.68■□□□□ 0.74
PDE3A-202ENST00000542675 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
PDE3A-202ENST00000542675 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
PDE3A-202ENST00000542675 CDK11AQ9UQ88 783 aaPredicted RBP19.65■□□□□ 0.74
PDE3A-202ENST00000542675 SPINK5Q9NQ38 1064 aaPredicted RBP19.64■□□□□ 0.73
PDE3A-202ENST00000542675 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.73
PDE3A-202ENST00000542675 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
PDE3A-202ENST00000542675 CDC42BPAQ5VT25 1732 aa19.62■□□□□ 0.73
PDE3A-202ENST00000542675 TRAPPC8Q9Y2L5 1435 aa19.62■□□□□ 0.73
PDE3A-202ENST00000542675 KIDINS220Q9ULH0 1771 aa19.62■□□□□ 0.73
PDE3A-202ENST00000542675 UHRF1BP1Q6BDS2 1440 aa19.61■□□□□ 0.73
PDE3A-202ENST00000542675 REREQ9P2R6 1566 aa19.61■□□□□ 0.73
PDE3A-202ENST00000542675 ABCC1P33527 1531 aa19.61■□□□□ 0.73
PDE3A-202ENST00000542675 CLIP1P30622 1438 aa19.6■□□□□ 0.73
PDE3A-202ENST00000542675 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
PDE3A-202ENST00000542675 ZBTB22O15209 634 aa19.56■□□□□ 0.72
PDE3A-202ENST00000542675 ILDR2Q71H61 639 aa19.56■□□□□ 0.72
PDE3A-202ENST00000542675 AGLP35573 1532 aa19.55■□□□□ 0.72
PDE3A-202ENST00000542675 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
PDE3A-202ENST00000542675 DISP3Q9P2K9 1392 aa19.53■□□□□ 0.72
PDE3A-202ENST00000542675 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
PDE3A-202ENST00000542675 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
PDE3A-202ENST00000542675 LTBP4Q8N2S1 1624 aa19.51■□□□□ 0.71
PDE3A-202ENST00000542675 SAMD9LQ8IVG5 1584 aa19.51■□□□□ 0.71
PDE3A-202ENST00000542675 PTPRTO14522 1441 aa19.51■□□□□ 0.71
PDE3A-202ENST00000542675 CCDC18Q5T9S5 1454 aa19.49■□□□□ 0.71
PDE3A-202ENST00000542675 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
PDE3A-202ENST00000542675 CAPN15O75808 1086 aa19.48■□□□□ 0.71
PDE3A-202ENST00000542675 MYCNP04198 464 aaPredicted RBP19.48■□□□□ 0.71
PDE3A-202ENST00000542675 ZNF777Q9ULD5 760 aaPredicted RBP19.48■□□□□ 0.71
PDE3A-202ENST00000542675 SYCP2Q9BX26 1530 aa19.47■□□□□ 0.71
PDE3A-202ENST00000542675 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
PDE3A-202ENST00000542675 CLTCQ00610 1675 aaKnown RBP19.46■□□□□ 0.71
PDE3A-202ENST00000542675 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
PDE3A-202ENST00000542675 CAMSAP1Q5T5Y3 1602 aa19.45■□□□□ 0.7
PDE3A-202ENST00000542675 HNRNPMP52272 730 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDE3A-202ENST00000542675 SPATA31D1Q6ZQQ2 1576 aa19.43■□□□□ 0.7
PDE3A-202ENST00000542675 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
PDE3A-202ENST00000542675 GPATCH8Q9UKJ3 1502 aaKnown RBP19.42■□□□□ 0.7
PDE3A-202ENST00000542675 ZMYM3Q14202 1370 aa19.41■□□□□ 0.7
PDE3A-202ENST00000542675 FYCO1Q9BQS8 1478 aa19.41■□□□□ 0.7
PDE3A-202ENST00000542675 SPAG9O60271 1321 aaKnown RBP19.4■□□□□ 0.7
PDE3A-202ENST00000542675 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
PDE3A-202ENST00000542675 ATP7AQ04656 1500 aa19.4■□□□□ 0.7
PDE3A-202ENST00000542675 INO80Q9ULG1 1556 aaPredicted RBP19.39■□□□□ 0.69
PDE3A-202ENST00000542675 MYO3AQ8NEV4 1616 aa19.39■□□□□ 0.69
PDE3A-202ENST00000542675 ZNF142P52746 1687 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms