RNA–Protein interactions for RNA: ENST00000542087.1

USP5-206, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 3

Gene USP5, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-206ENST00000542087 MYO5CQ9NQX4 1742 aa23.61■■□□□ 1.37
USP5-206ENST00000542087 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
USP5-206ENST00000542087 KIF14Q15058 1648 aa23.57■■□□□ 1.36
USP5-206ENST00000542087 ATP1B4Q9UN42 357 aaPredicted RBP23.55■■□□□ 1.36
USP5-206ENST00000542087 LRRIQ1Q96JM4 1722 aa23.54■■□□□ 1.36
USP5-206ENST00000542087 FER1L4A9Z1Z3 1794 aa23.54■■□□□ 1.36
USP5-206ENST00000542087 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
USP5-206ENST00000542087 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
USP5-206ENST00000542087 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
USP5-206ENST00000542087 EFCAB2Q5VUJ9 269 aa23.5■■□□□ 1.35
USP5-206ENST00000542087 FBXO41Q8TF61 875 aa23.48■■□□□ 1.35
USP5-206ENST00000542087 C9orf84Q5VXU9 1444 aa23.48■■□□□ 1.35
USP5-206ENST00000542087 ATP10AO60312 1499 aa23.48■■□□□ 1.35
USP5-206ENST00000542087 ARHGAP5Q13017 1502 aa23.47■■□□□ 1.35
USP5-206ENST00000542087 ARHGEF12Q9NZN5 1544 aa23.47■■□□□ 1.35
USP5-206ENST00000542087 CLIP1P30622 1438 aa23.46■■□□□ 1.35
USP5-206ENST00000542087 MLECQ14165 292 aa23.46■■□□□ 1.35
USP5-206ENST00000542087 KDM5CP41229 1560 aa23.45■■□□□ 1.34
USP5-206ENST00000542087 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
USP5-206ENST00000542087 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
USP5-206ENST00000542087 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
USP5-206ENST00000542087 HSPA2P54652 639 aa23.42■■□□□ 1.34
USP5-206ENST00000542087 PREX2Q70Z35 1606 aa23.39■■□□□ 1.33
USP5-206ENST00000542087 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
USP5-206ENST00000542087 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
USP5-206ENST00000542087 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
USP5-206ENST00000542087 AFAP1Q8N556 730 aa23.37■■□□□ 1.33
USP5-206ENST00000542087 PREX1Q8TCU6 1659 aa23.36■■□□□ 1.33
USP5-206ENST00000542087 REREQ9P2R6 1566 aa23.35■■□□□ 1.33
USP5-206ENST00000542087 ABCC1P33527 1531 aa23.35■■□□□ 1.33
USP5-206ENST00000542087 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
USP5-206ENST00000542087 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
USP5-206ENST00000542087 MLH3Q9UHC1 1453 aa23.32■■□□□ 1.32
USP5-206ENST00000542087 CDC42BPAQ5VT25 1732 aa23.31■■□□□ 1.32
USP5-206ENST00000542087 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
USP5-206ENST00000542087 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
USP5-206ENST00000542087 CEBPAP49715 358 aaPredicted RBP23.28■■□□□ 1.32
USP5-206ENST00000542087 MYT1LQ9UL68 1186 aa23.28■■□□□ 1.32
USP5-206ENST00000542087 AGLP35573 1532 aa23.26■■□□□ 1.31
USP5-206ENST00000542087 SETD1BQ9UPS6 1966 aaKnown RBP23.25■■□□□ 1.31
USP5-206ENST00000542087 KIDINS220Q9ULH0 1771 aa23.25■■□□□ 1.31
USP5-206ENST00000542087 C3P01024 1663 aa23.24■■□□□ 1.31
USP5-206ENST00000542087 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
USP5-206ENST00000542087 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
USP5-206ENST00000542087 SAMD9LQ8IVG5 1584 aa23.21■■□□□ 1.31
USP5-206ENST00000542087 CERKQ8TCT0 537 aa23.19■■□□□ 1.3
USP5-206ENST00000542087 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
USP5-206ENST00000542087 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
USP5-206ENST00000542087 ESF1Q9H501 851 aaKnown RBP23.12■■□□□ 1.29
USP5-206ENST00000542087 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
USP5-206ENST00000542087 ZNF777Q9ULD5 760 aaPredicted RBP23.12■■□□□ 1.29
USP5-206ENST00000542087 MROH2AA6NES4 1674 aa23.1■■□□□ 1.29
USP5-206ENST00000542087 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
USP5-206ENST00000542087 INO80Q9ULG1 1556 aaPredicted RBP23.09■■□□□ 1.29
USP5-206ENST00000542087 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.29
USP5-206ENST00000542087 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.29
USP5-206ENST00000542087 ATP7AQ04656 1500 aa23.08■■□□□ 1.29
USP5-206ENST00000542087 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.29
USP5-206ENST00000542087 PLEKHH2Q8IVE3 1493 aa23.08■■□□□ 1.29
USP5-206ENST00000542087 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
USP5-206ENST00000542087 HNRNPMP52272 730 aaKnown RBP eCLIP23.07■■□□□ 1.28
USP5-206ENST00000542087 PTPRTO14522 1441 aa23.06■■□□□ 1.28
USP5-206ENST00000542087 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
USP5-206ENST00000542087 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
USP5-206ENST00000542087 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
USP5-206ENST00000542087 NPATQ14207 1427 aa23.03■■□□□ 1.28
USP5-206ENST00000542087 TIAM1Q13009 1591 aa23.02■■□□□ 1.28
USP5-206ENST00000542087 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
USP5-206ENST00000542087 CLTCQ00610 1675 aaKnown RBP23.01■■□□□ 1.27
USP5-206ENST00000542087 A2MP01023 1474 aa23.01■■□□□ 1.27
USP5-206ENST00000542087 EHBP1L1Q8N3D4 1523 aa23■■□□□ 1.27
USP5-206ENST00000542087 ZMYM3Q14202 1370 aa23■■□□□ 1.27
USP5-206ENST00000542087 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
USP5-206ENST00000542087 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
USP5-206ENST00000542087 ZNF142P52746 1687 aaPredicted RBP22.95■■□□□ 1.26
USP5-206ENST00000542087 LTBP4Q8N2S1 1624 aa22.95■■□□□ 1.26
USP5-206ENST00000542087 MYO3AQ8NEV4 1616 aa22.95■■□□□ 1.26
USP5-206ENST00000542087 MBD5Q9P267 1494 aa22.94■■□□□ 1.26
USP5-206ENST00000542087 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
USP5-206ENST00000542087 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
USP5-206ENST00000542087 PTPRKQ15262 1439 aa22.91■■□□□ 1.26
USP5-206ENST00000542087 GGT6Q6P531 493 aa22.89■■□□□ 1.25
USP5-206ENST00000542087 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.25
USP5-206ENST00000542087 IQSEC2Q5JU85 1478 aa22.88■■□□□ 1.25
USP5-206ENST00000542087 RTEL1-TNFRSF6BF6WH68 1400 aa22.88■■□□□ 1.25
USP5-206ENST00000542087 PLA2R1Q13018 1463 aa22.86■■□□□ 1.25
USP5-206ENST00000542087 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
USP5-206ENST00000542087 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
USP5-206ENST00000542087 CCDC141Q6ZP82 1450 aa22.84■■□□□ 1.25
USP5-206ENST00000542087 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
USP5-206ENST00000542087 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.25
USP5-206ENST00000542087 CAMSAP2Q08AD1 1489 aa22.83■■□□□ 1.25
USP5-206ENST00000542087 TCOF1Q13428 1488 aaKnown RBP22.83■■□□□ 1.25
USP5-206ENST00000542087 PKD2Q13563 968 aa22.79■■□□□ 1.24
USP5-206ENST00000542087 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
USP5-206ENST00000542087 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
USP5-206ENST00000542087 DNMT1P26358 1616 aaKnown RBP22.77■■□□□ 1.24
USP5-206ENST00000542087 ZNF335Q9H4Z2 1342 aaPredicted RBP22.77■■□□□ 1.24
USP5-206ENST00000542087 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
USP5-206ENST00000542087 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms