RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
POLR1B-217ENST00000541869 EVA1CP58658 441 aa13.63□□□□□ -0.23
POLR1B-217ENST00000541869 TMF1P82094 1093 aa13.62□□□□□ -0.23
POLR1B-217ENST00000541869 ATF3P18847 181 aa13.62□□□□□ -0.23
POLR1B-217ENST00000541869 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
POLR1B-217ENST00000541869 MSH5O43196 834 aa13.61□□□□□ -0.23
POLR1B-217ENST00000541869 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
POLR1B-217ENST00000541869 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
POLR1B-217ENST00000541869 PRG4Q92954 1404 aaPredicted RBP13.59□□□□□ -0.23
POLR1B-217ENST00000541869 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
POLR1B-217ENST00000541869 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
POLR1B-217ENST00000541869 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
POLR1B-217ENST00000541869 TOPBP1Q92547 1522 aa13.55□□□□□ -0.24
POLR1B-217ENST00000541869 LAMC3Q9Y6N6 1575 aa13.55□□□□□ -0.24
POLR1B-217ENST00000541869 G3V3G9 751 aa13.55□□□□□ -0.24
POLR1B-217ENST00000541869 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
POLR1B-217ENST00000541869 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
POLR1B-217ENST00000541869 POGZQ7Z3K3 1410 aa13.55□□□□□ -0.24
POLR1B-217ENST00000541869 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
POLR1B-217ENST00000541869 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
POLR1B-217ENST00000541869 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
POLR1B-217ENST00000541869 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
POLR1B-217ENST00000541869 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
POLR1B-217ENST00000541869 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
POLR1B-217ENST00000541869 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.24
POLR1B-217ENST00000541869 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
POLR1B-217ENST00000541869 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
POLR1B-217ENST00000541869 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
POLR1B-217ENST00000541869 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
POLR1B-217ENST00000541869 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
POLR1B-217ENST00000541869 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
POLR1B-217ENST00000541869 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
POLR1B-217ENST00000541869 SNAPC4Q5SXM2 1469 aa13.5□□□□□ -0.25
POLR1B-217ENST00000541869 EIF3AQ14152 1382 aaKnown RBP13.5□□□□□ -0.25
POLR1B-217ENST00000541869 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
POLR1B-217ENST00000541869 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
POLR1B-217ENST00000541869 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
POLR1B-217ENST00000541869 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
POLR1B-217ENST00000541869 MORC1Q86VD1 984 aa13.47□□□□□ -0.25
POLR1B-217ENST00000541869 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
POLR1B-217ENST00000541869 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
POLR1B-217ENST00000541869 NUTM2DQ5VT03 806 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-217ENST00000541869 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-217ENST00000541869 DNMBPQ6XZF7 1577 aa13.47□□□□□ -0.25
POLR1B-217ENST00000541869 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.25
POLR1B-217ENST00000541869 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
POLR1B-217ENST00000541869 THEMISQ8N1K5 641 aaPredicted RBP13.46□□□□□ -0.25
POLR1B-217ENST00000541869 AMPHP49418 695 aa13.46□□□□□ -0.26
POLR1B-217ENST00000541869 CDK11BP21127 795 aaKnown RBP13.45□□□□□ -0.26
POLR1B-217ENST00000541869 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
POLR1B-217ENST00000541869 PSME1Q06323 249 aa13.45□□□□□ -0.26
POLR1B-217ENST00000541869 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
POLR1B-217ENST00000541869 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
POLR1B-217ENST00000541869 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
POLR1B-217ENST00000541869 CC2D1BQ5T0F9 858 aaKnown RBP13.42□□□□□ -0.26
POLR1B-217ENST00000541869 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
POLR1B-217ENST00000541869 MYOM3Q5VTT5 1437 aa13.41□□□□□ -0.26
POLR1B-217ENST00000541869 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
POLR1B-217ENST00000541869 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
POLR1B-217ENST00000541869 CCDC144AA2RUR9 1427 aa13.4□□□□□ -0.26
POLR1B-217ENST00000541869 ANKLE2Q86XL3 938 aa13.4□□□□□ -0.26
POLR1B-217ENST00000541869 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
POLR1B-217ENST00000541869 ARHGAP5Q13017 1502 aa13.37□□□□□ -0.27
POLR1B-217ENST00000541869 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
POLR1B-217ENST00000541869 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-217ENST00000541869 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-217ENST00000541869 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
POLR1B-217ENST00000541869 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-217ENST00000541869 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
POLR1B-217ENST00000541869 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
POLR1B-217ENST00000541869 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
POLR1B-217ENST00000541869 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
POLR1B-217ENST00000541869 AFAP1Q8N556 730 aa13.35□□□□□ -0.27
POLR1B-217ENST00000541869 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
POLR1B-217ENST00000541869 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
POLR1B-217ENST00000541869 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
POLR1B-217ENST00000541869 CUX1P39880 1505 aa13.33□□□□□ -0.27
POLR1B-217ENST00000541869 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
POLR1B-217ENST00000541869 KIF15Q9NS87 1388 aa13.33□□□□□ -0.28
POLR1B-217ENST00000541869 PLEKHH2Q8IVE3 1493 aa13.33□□□□□ -0.28
POLR1B-217ENST00000541869 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
POLR1B-217ENST00000541869 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
POLR1B-217ENST00000541869 CALD1Q05682 793 aaKnown RBP13.31□□□□□ -0.28
POLR1B-217ENST00000541869 MS4A1P11836 297 aa13.31□□□□□ -0.28
POLR1B-217ENST00000541869 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 STAC3Q96MF2 364 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
POLR1B-217ENST00000541869 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
POLR1B-217ENST00000541869 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
POLR1B-217ENST00000541869 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
POLR1B-217ENST00000541869 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
POLR1B-217ENST00000541869 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
POLR1B-217ENST00000541869 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
POLR1B-217ENST00000541869 GPRASP1Q5JY77 1395 aa13.27□□□□□ -0.28
POLR1B-217ENST00000541869 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.28
POLR1B-217ENST00000541869 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms