RNA–Protein interactions for RNA: ENST00000541588.5

RAB6A-207, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB6A, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-207ENST00000541588 PLPPR3Q6T4P5 718 aa30.23■■■□□ 2.43
RAB6A-207ENST00000541588 MAGI2Q86UL8 1455 aa30.23■■■□□ 2.43
RAB6A-207ENST00000541588 ARHGAP35Q9NRY4 1499 aa30.21■■■□□ 2.43
RAB6A-207ENST00000541588 FBXO41Q8TF61 875 aa30.21■■■□□ 2.43
RAB6A-207ENST00000541588 MLECQ14165 292 aa30.18■■■□□ 2.42
RAB6A-207ENST00000541588 MYO5CQ9NQX4 1742 aa30.18■■■□□ 2.42
RAB6A-207ENST00000541588 CDK11AQ9UQ88 783 aaPredicted RBP30.17■■■□□ 2.42
RAB6A-207ENST00000541588 EFCAB2Q5VUJ9 269 aa30.15■■■□□ 2.42
RAB6A-207ENST00000541588 HSPA2P54652 639 aa30.13■■■□□ 2.41
RAB6A-207ENST00000541588 KIF14Q15058 1648 aa30.13■■■□□ 2.41
RAB6A-207ENST00000541588 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
RAB6A-207ENST00000541588 FER1L4A9Z1Z3 1794 aa30.12■■■□□ 2.41
RAB6A-207ENST00000541588 ATP10AO60312 1499 aa30.09■■■□□ 2.41
RAB6A-207ENST00000541588 TROQ12816 1431 aaPredicted RBP30.08■■■□□ 2.41
RAB6A-207ENST00000541588 C9orf84Q5VXU9 1444 aa30.06■■■□□ 2.4
RAB6A-207ENST00000541588 ARHGAP5Q13017 1502 aa30.06■■■□□ 2.4
RAB6A-207ENST00000541588 LRRIQ1Q96JM4 1722 aa30.05■■■□□ 2.4
RAB6A-207ENST00000541588 CLIP1P30622 1438 aa30.05■■■□□ 2.4
RAB6A-207ENST00000541588 ARHGEF12Q9NZN5 1544 aa30.02■■■□□ 2.4
RAB6A-207ENST00000541588 ZNF518AQ6AHZ1 1483 aa30.02■■■□□ 2.4
RAB6A-207ENST00000541588 AFAP1Q8N556 730 aa30■■■□□ 2.39
RAB6A-207ENST00000541588 MYT1LQ9UL68 1186 aa29.98■■■□□ 2.39
RAB6A-207ENST00000541588 KDM5CP41229 1560 aa29.97■■■□□ 2.39
RAB6A-207ENST00000541588 CDC42BPBQ9Y5S2 1711 aa29.95■■■□□ 2.38
RAB6A-207ENST00000541588 CEBPAP49715 358 aaPredicted RBP29.94■■■□□ 2.38
RAB6A-207ENST00000541588 PREX1Q8TCU6 1659 aa29.9■■■□□ 2.38
RAB6A-207ENST00000541588 DIP2CQ9Y2E4 1556 aa29.9■■■□□ 2.38
RAB6A-207ENST00000541588 CASKIN1Q8WXD9 1431 aa29.89■■■□□ 2.38
RAB6A-207ENST00000541588 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
RAB6A-207ENST00000541588 PREX2Q70Z35 1606 aa29.88■■■□□ 2.37
RAB6A-207ENST00000541588 ABCA6Q8N139 1617 aa29.85■■■□□ 2.37
RAB6A-207ENST00000541588 MLH3Q9UHC1 1453 aa29.85■■■□□ 2.37
RAB6A-207ENST00000541588 TRAPPC8Q9Y2L5 1435 aa29.84■■■□□ 2.37
RAB6A-207ENST00000541588 ABCC1P33527 1531 aa29.84■■■□□ 2.37
RAB6A-207ENST00000541588 REREQ9P2R6 1566 aa29.83■■■□□ 2.37
RAB6A-207ENST00000541588 CERKQ8TCT0 537 aa29.82■■■□□ 2.36
RAB6A-207ENST00000541588 ITSN2Q9NZM3 1697 aa29.82■■■□□ 2.36
RAB6A-207ENST00000541588 SETD1BQ9UPS6 1966 aaKnown RBP29.8■■■□□ 2.36
RAB6A-207ENST00000541588 CDC42BPAQ5VT25 1732 aa29.79■■■□□ 2.36
RAB6A-207ENST00000541588 UHRF1BP1Q6BDS2 1440 aa29.77■■■□□ 2.36
RAB6A-207ENST00000541588 FYCO1Q9BQS8 1478 aa29.75■■■□□ 2.35
RAB6A-207ENST00000541588 AGLP35573 1532 aa29.75■■■□□ 2.35
RAB6A-207ENST00000541588 ESF1Q9H501 851 aaKnown RBP29.74■■■□□ 2.35
RAB6A-207ENST00000541588 C3P01024 1663 aa29.74■■■□□ 2.35
RAB6A-207ENST00000541588 STRCQ7RTU9 1775 aa29.74■■■□□ 2.35
RAB6A-207ENST00000541588 KIDINS220Q9ULH0 1771 aa29.74■■■□□ 2.35
RAB6A-207ENST00000541588 ZNF777Q9ULD5 760 aaPredicted RBP29.72■■■□□ 2.35
RAB6A-207ENST00000541588 DMRT2Q9Y5R5 561 aa29.7■■■□□ 2.35
RAB6A-207ENST00000541588 SAMD9LQ8IVG5 1584 aa29.66■■■□□ 2.34
RAB6A-207ENST00000541588 SYCP2Q9BX26 1530 aa29.65■■■□□ 2.34
RAB6A-207ENST00000541588 GPATCH8Q9UKJ3 1502 aaKnown RBP29.65■■■□□ 2.34
RAB6A-207ENST00000541588 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
RAB6A-207ENST00000541588 HNRNPMP52272 730 aaKnown RBP eCLIP29.61■■■□□ 2.335e-8■■□□□ 12.5
RAB6A-207ENST00000541588 SPAG9O60271 1321 aaKnown RBP29.61■■■□□ 2.33
RAB6A-207ENST00000541588 CFDP1Q9UEE9 299 aaPredicted RBP29.57■■■□□ 2.32
RAB6A-207ENST00000541588 SUPT6HQ7KZ85 1726 aaKnown RBP29.57■■■□□ 2.32
RAB6A-207ENST00000541588 PTPRTO14522 1441 aa29.54■■■□□ 2.32
RAB6A-207ENST00000541588 CCNB3Q8WWL7 1395 aa29.54■■■□□ 2.32
RAB6A-207ENST00000541588 ATP7AQ04656 1500 aa29.54■■■□□ 2.32
RAB6A-207ENST00000541588 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
RAB6A-207ENST00000541588 KIAA1107Q9UPP5 1409 aa29.53■■■□□ 2.32
RAB6A-207ENST00000541588 PLEKHH2Q8IVE3 1493 aa29.52■■■□□ 2.32
RAB6A-207ENST00000541588 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
RAB6A-207ENST00000541588 INO80Q9ULG1 1556 aaPredicted RBP29.5■■■□□ 2.31
RAB6A-207ENST00000541588 ZMYM3Q14202 1370 aa29.5■■■□□ 2.31
RAB6A-207ENST00000541588 NPATQ14207 1427 aa29.48■■■□□ 2.31
RAB6A-207ENST00000541588 NCOA1Q15788 1441 aa29.48■■■□□ 2.31
RAB6A-207ENST00000541588 A2MP01023 1474 aa29.47■■■□□ 2.31
RAB6A-207ENST00000541588 PLXNC1O60486 1568 aa29.46■■■□□ 2.31
RAB6A-207ENST00000541588 CLTCQ00610 1675 aaKnown RBP29.46■■■□□ 2.31
RAB6A-207ENST00000541588 CAMSAP1Q5T5Y3 1602 aa29.43■■■□□ 2.3
RAB6A-207ENST00000541588 GGT6Q6P531 493 aa29.42■■■□□ 2.3
RAB6A-207ENST00000541588 ZNF644Q9H582 1327 aaPredicted RBP29.42■■■□□ 2.3
RAB6A-207ENST00000541588 TIAM1Q13009 1591 aa29.4■■■□□ 2.3
RAB6A-207ENST00000541588 LTBP4Q8N2S1 1624 aa29.4■■■□□ 2.3
RAB6A-207ENST00000541588 ADGBQ8N7X0 1667 aa29.37■■■□□ 2.29
RAB6A-207ENST00000541588 EHBP1L1Q8N3D4 1523 aa29.37■■■□□ 2.29
RAB6A-207ENST00000541588 MYO3AQ8NEV4 1616 aa29.35■■■□□ 2.29
RAB6A-207ENST00000541588 NCKAP5LQ9HCH0 1330 aa29.35■■■□□ 2.29
RAB6A-207ENST00000541588 PTPRKQ15262 1439 aa29.35■■■□□ 2.29
RAB6A-207ENST00000541588 MBD5Q9P267 1494 aa29.34■■■□□ 2.29
RAB6A-207ENST00000541588 ZNF142P52746 1687 aaPredicted RBP29.32■■■□□ 2.28
RAB6A-207ENST00000541588 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
RAB6A-207ENST00000541588 DISP3Q9P2K9 1392 aa29.31■■■□□ 2.28
RAB6A-207ENST00000541588 PPP6R1Q9UPN7 881 aa29.3■■■□□ 2.28
RAB6A-207ENST00000541588 CEP170BQ9Y4F5 1589 aaPredicted RBP29.3■■■□□ 2.28
RAB6A-207ENST00000541588 IQSEC2Q5JU85 1478 aa29.29■■■□□ 2.28
RAB6A-207ENST00000541588 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
RAB6A-207ENST00000541588 PLA2R1Q13018 1463 aa29.27■■■□□ 2.28
RAB6A-207ENST00000541588 ZNF335Q9H4Z2 1342 aaPredicted RBP29.25■■■□□ 2.27
RAB6A-207ENST00000541588 PKD2Q13563 968 aa29.25■■■□□ 2.27
RAB6A-207ENST00000541588 DHX29Q7Z478 1369 aaKnown RBP29.25■■■□□ 2.27
RAB6A-207ENST00000541588 TCOF1Q13428 1488 aaKnown RBP29.22■■■□□ 2.27
RAB6A-207ENST00000541588 ILDR2Q71H61 639 aa29.2■■■□□ 2.26
RAB6A-207ENST00000541588 NCOA2Q15596 1464 aa29.2■■■□□ 2.26
RAB6A-207ENST00000541588 CCDC141Q6ZP82 1450 aa29.2■■■□□ 2.26
RAB6A-207ENST00000541588 CAMSAP2Q08AD1 1489 aa29.19■■■□□ 2.26
RAB6A-207ENST00000541588 KIF3BO15066 747 aa29.19■■■□□ 2.26
RAB6A-207ENST00000541588 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
RAB6A-207ENST00000541588 DNMT1P26358 1616 aaKnown RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms