RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
THBS3-210ENST00000541576 SETD5Q9C0A6 1442 aa12.91□□□□□ -0.34
THBS3-210ENST00000541576 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
THBS3-210ENST00000541576 CYB5RLQ6IPT4 315 aa12.91□□□□□ -0.34
THBS3-210ENST00000541576 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
THBS3-210ENST00000541576 ASXL2Q76L83 1435 aa12.9□□□□□ -0.34
THBS3-210ENST00000541576 RAB3GAP2Q9H2M9 1393 aa12.9□□□□□ -0.34
THBS3-210ENST00000541576 DAPK1P53355 1430 aa12.89□□□□□ -0.35
THBS3-210ENST00000541576 DNMT1P26358 1616 aaKnown RBP12.89□□□□□ -0.35
THBS3-210ENST00000541576 CDC42BPBQ9Y5S2 1711 aa12.89□□□□□ -0.35
THBS3-210ENST00000541576 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
THBS3-210ENST00000541576 ABCC5O15440 1437 aa12.88□□□□□ -0.35
THBS3-210ENST00000541576 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
THBS3-210ENST00000541576 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
THBS3-210ENST00000541576 ARHGAP5Q13017 1502 aa12.87□□□□□ -0.35
THBS3-210ENST00000541576 PLCH2O75038 1416 aa12.86□□□□□ -0.35
THBS3-210ENST00000541576 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
THBS3-210ENST00000541576 NAIPQ13075 1403 aa12.85□□□□□ -0.35
THBS3-210ENST00000541576 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
THBS3-210ENST00000541576 RRP7BPQ9NSQ0 103 aa12.84□□□□□ -0.35
THBS3-210ENST00000541576 DHX57Q6P158 1386 aaKnown RBP12.84□□□□□ -0.35
THBS3-210ENST00000541576 ROCK1Q13464 1354 aa12.83□□□□□ -0.35
THBS3-210ENST00000541576 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.36
THBS3-210ENST00000541576 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
THBS3-210ENST00000541576 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
THBS3-210ENST00000541576 HNRNPMP52272 730 aaKnown RBP eCLIP12.82□□□□□ -0.36
THBS3-210ENST00000541576 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
THBS3-210ENST00000541576 ARHGEF5Q12774 1597 aa12.82□□□□□ -0.36
THBS3-210ENST00000541576 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
THBS3-210ENST00000541576 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
THBS3-210ENST00000541576 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
THBS3-210ENST00000541576 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
THBS3-210ENST00000541576 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
THBS3-210ENST00000541576 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
THBS3-210ENST00000541576 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
THBS3-210ENST00000541576 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
THBS3-210ENST00000541576 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
THBS3-210ENST00000541576 TSPY4P0CV99 314 aa12.8□□□□□ -0.36
THBS3-210ENST00000541576 TSPY10P0CW01 314 aa12.8□□□□□ -0.36
THBS3-210ENST00000541576 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
THBS3-210ENST00000541576 ADGRL2O95490 1459 aa12.79□□□□□ -0.36
THBS3-210ENST00000541576 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
THBS3-210ENST00000541576 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
THBS3-210ENST00000541576 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
THBS3-210ENST00000541576 ANKRD30AQ9BXX3 1397 aa12.78□□□□□ -0.36
THBS3-210ENST00000541576 FANCAO15360 1455 aa12.77□□□□□ -0.37
THBS3-210ENST00000541576 ABCC1P33527 1531 aa12.77□□□□□ -0.37
THBS3-210ENST00000541576 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
THBS3-210ENST00000541576 CD109Q6YHK3 1445 aa12.76□□□□□ -0.37
THBS3-210ENST00000541576 KDM6BO15054 1643 aa12.75□□□□□ -0.37
THBS3-210ENST00000541576 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
THBS3-210ENST00000541576 MAST1Q9Y2H9 1570 aa12.73□□□□□ -0.37
THBS3-210ENST00000541576 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
THBS3-210ENST00000541576 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
THBS3-210ENST00000541576 KIF15Q9NS87 1388 aa12.72□□□□□ -0.37
THBS3-210ENST00000541576 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
THBS3-210ENST00000541576 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
THBS3-210ENST00000541576 GLI2P10070 1586 aa12.71□□□□□ -0.38
THBS3-210ENST00000541576 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
THBS3-210ENST00000541576 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
THBS3-210ENST00000541576 AFAP1Q8N556 730 aa12.69□□□□□ -0.38
THBS3-210ENST00000541576 MAP3K4Q9Y6R4 1608 aa12.68□□□□□ -0.38
THBS3-210ENST00000541576 FAM69CQ0P6D2 419 aa12.68□□□□□ -0.38
THBS3-210ENST00000541576 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
THBS3-210ENST00000541576 DIP2BQ9P265 1576 aa12.68□□□□□ -0.38
THBS3-210ENST00000541576 SPAG9O60271 1321 aaKnown RBP12.68□□□□□ -0.38
THBS3-210ENST00000541576 NEO1Q92859 1461 aa12.67□□□□□ -0.38
THBS3-210ENST00000541576 RTEL1-TNFRSF6BF6WH68 1400 aa12.66□□□□□ -0.38
THBS3-210ENST00000541576 SIN3AQ96ST3 1273 aa12.65□□□□□ -0.38
THBS3-210ENST00000541576 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
THBS3-210ENST00000541576 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
THBS3-210ENST00000541576 ZNF518AQ6AHZ1 1483 aa12.64□□□□□ -0.39
THBS3-210ENST00000541576 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
THBS3-210ENST00000541576 ATP7AQ04656 1500 aa12.63□□□□□ -0.39
THBS3-210ENST00000541576 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
THBS3-210ENST00000541576 INO80Q9ULG1 1556 aaPredicted RBP12.63□□□□□ -0.39
THBS3-210ENST00000541576 DENND4BO75064 1496 aaPredicted RBP12.62□□□□□ -0.39
THBS3-210ENST00000541576 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
THBS3-210ENST00000541576 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
THBS3-210ENST00000541576 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
THBS3-210ENST00000541576 ERBINQ96RT1 1412 aa12.61□□□□□ -0.39
THBS3-210ENST00000541576 NUP155O75694 1391 aa12.61□□□□□ -0.39
THBS3-210ENST00000541576 PZPP20742 1482 aa12.61□□□□□ -0.39
THBS3-210ENST00000541576 KDM5CP41229 1560 aa12.6□□□□□ -0.39
THBS3-210ENST00000541576 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
THBS3-210ENST00000541576 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
THBS3-210ENST00000541576 KDM5DQ9BY66 1539 aa12.59□□□□□ -0.39
THBS3-210ENST00000541576 KIF13AQ9H1H9 1805 aa12.59□□□□□ -0.39
THBS3-210ENST00000541576 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
THBS3-210ENST00000541576 FOXD1Q16676 465 aa12.58□□□□□ -0.39
THBS3-210ENST00000541576 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.4
THBS3-210ENST00000541576 PPRC1Q5VV67 1664 aaKnown RBP12.58□□□□□ -0.4
THBS3-210ENST00000541576 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
THBS3-210ENST00000541576 RAPGEF3O95398 923 aa12.58□□□□□ -0.4
THBS3-210ENST00000541576 UNC13BO14795 1591 aa12.57□□□□□ -0.4
THBS3-210ENST00000541576 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
THBS3-210ENST00000541576 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
THBS3-210ENST00000541576 PKD2Q13563 968 aa12.56□□□□□ -0.4
THBS3-210ENST00000541576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.4
THBS3-210ENST00000541576 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms