RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 RASSF8Q8NHQ8 419 aa11.55□□□□□ -0.56
CLASP1-215ENST00000541377 HSP90AB1P08238 724 aaKnown RBP11.55□□□□□ -0.56
CLASP1-215ENST00000541377 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
CLASP1-215ENST00000541377 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
CLASP1-215ENST00000541377 SAFB2Q14151 953 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■□□□□ 10
CLASP1-215ENST00000541377 FRAT1Q92837 279 aaPredicted RBP11.53□□□□□ -0.56
CLASP1-215ENST00000541377 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
CLASP1-215ENST00000541377 MS4A1P11836 297 aa11.52□□□□□ -0.57
CLASP1-215ENST00000541377 ERICH6BQ5W0A0 696 aa11.52□□□□□ -0.57
CLASP1-215ENST00000541377 EID1Q9Y6B2 187 aa11.51□□□□□ -0.57
CLASP1-215ENST00000541377 STK26Q9P289 416 aa11.51□□□□□ -0.57
CLASP1-215ENST00000541377 CCDC34Q96HJ3 373 aa11.5□□□□□ -0.57
CLASP1-215ENST00000541377 RAD21O60216 631 aa11.5□□□□□ -0.57
CLASP1-215ENST00000541377 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
CLASP1-215ENST00000541377 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
CLASP1-215ENST00000541377 CREBRFQ8IUR6 639 aa11.48□□□□□ -0.57
CLASP1-215ENST00000541377 CARD11Q9BXL7 1154 aa11.47□□□□□ -0.57
CLASP1-215ENST00000541377 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
CLASP1-215ENST00000541377 NOL10Q9BSC4 688 aaKnown RBP11.47□□□□□ -0.57
CLASP1-215ENST00000541377 GPATCH3Q96I76 525 aa11.47□□□□□ -0.57
CLASP1-215ENST00000541377 GGT6Q6P531 493 aa11.46□□□□□ -0.57
CLASP1-215ENST00000541377 CCAR1Q8IX12 1150 aaKnown RBP11.46□□□□□ -0.57
CLASP1-215ENST00000541377 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.58
CLASP1-215ENST00000541377 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.58
CLASP1-215ENST00000541377 PPP1R1BQ9UD71 204 aaPredicted RBP11.46□□□□□ -0.58
CLASP1-215ENST00000541377 CHMP4AQ9BY43 222 aa11.45□□□□□ -0.58
CLASP1-215ENST00000541377 HDGFL2Q7Z4V5 671 aaPredicted RBP11.45□□□□□ -0.58
CLASP1-215ENST00000541377 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
CLASP1-215ENST00000541377 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
CLASP1-215ENST00000541377 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
CLASP1-215ENST00000541377 SPAG9O60271 1321 aaKnown RBP11.43□□□□□ -0.58
CLASP1-215ENST00000541377 APBB1O00213 710 aa11.43□□□□□ -0.58
CLASP1-215ENST00000541377 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
CLASP1-215ENST00000541377 HIRIP3Q9BW71 556 aaPredicted RBP11.43□□□□□ -0.58
CLASP1-215ENST00000541377 NGDNQ8NEJ9 315 aaKnown RBP11.42□□□□□ -0.58
CLASP1-215ENST00000541377 CC2D1BQ5T0F9 858 aaKnown RBP11.42□□□□□ -0.58
CLASP1-215ENST00000541377 TPM4P67936 248 aa11.41□□□□□ -0.58
CLASP1-215ENST00000541377 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
CLASP1-215ENST00000541377 HTATSF1O43719 755 aaKnown RBP11.41□□□□□ -0.58
CLASP1-215ENST00000541377 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
CLASP1-215ENST00000541377 PAF1Q8N7H5 531 aa11.4□□□□□ -0.58
CLASP1-215ENST00000541377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.4□□□□□ -0.581e-6■■■■■ 372.3
CLASP1-215ENST00000541377 CCDC43Q96MW1 224 aaKnown RBP11.4□□□□□ -0.58
CLASP1-215ENST00000541377 HDAC5Q9UQL6 1122 aa11.39□□□□□ -0.59
CLASP1-215ENST00000541377 MORC1Q86VD1 984 aa11.39□□□□□ -0.59
CLASP1-215ENST00000541377 RGS3P49796 1198 aa11.39□□□□□ -0.59
CLASP1-215ENST00000541377 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
CLASP1-215ENST00000541377 VPS37DQ86XT2 251 aa11.38□□□□□ -0.59
CLASP1-215ENST00000541377 PES1O00541 588 aaKnown RBP11.38□□□□□ -0.59
CLASP1-215ENST00000541377 R3HCC1Q9Y3T6 440 aaKnown RBP11.38□□□□□ -0.59
CLASP1-215ENST00000541377 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
CLASP1-215ENST00000541377 HSCBQ8IWL3 235 aa11.37□□□□□ -0.59
CLASP1-215ENST00000541377 STK31Q9BXU1 1019 aa11.37□□□□□ -0.59
CLASP1-215ENST00000541377 LTV1Q96GA3 475 aaPredicted RBP11.37□□□□□ -0.59
CLASP1-215ENST00000541377 WWC2Q6AWC2 1192 aa11.36□□□□□ -0.59
CLASP1-215ENST00000541377 AMPHP49418 695 aa11.36□□□□□ -0.59
CLASP1-215ENST00000541377 TMF1P82094 1093 aa11.35□□□□□ -0.59
CLASP1-215ENST00000541377 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
CLASP1-215ENST00000541377 CLIP1P30622 1438 aa11.34□□□□□ -0.59
CLASP1-215ENST00000541377 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
CLASP1-215ENST00000541377 EIF4G1Q04637 1599 aaKnown RBP11.34□□□□□ -0.59
CLASP1-215ENST00000541377 NAP1L5Q96NT1 182 aaPredicted RBP11.34□□□□□ -0.59
CLASP1-215ENST00000541377 PPP4R2Q9NY27 417 aa11.34□□□□□ -0.59
CLASP1-215ENST00000541377 TPD52L1Q16890 204 aaPredicted RBP11.33□□□□□ -0.6
CLASP1-215ENST00000541377 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
CLASP1-215ENST00000541377 USP35Q9P2H5 1018 aa11.33□□□□□ -0.6
CLASP1-215ENST00000541377 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
CLASP1-215ENST00000541377 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
CLASP1-215ENST00000541377 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
CLASP1-215ENST00000541377 TSR1Q2NL82 804 aaKnown RBP11.32□□□□□ -0.6
CLASP1-215ENST00000541377 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
CLASP1-215ENST00000541377 TPM3P06753 285 aa11.31□□□□□ -0.6
CLASP1-215ENST00000541377 TPM2P07951 284 aa11.31□□□□□ -0.6
CLASP1-215ENST00000541377 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
CLASP1-215ENST00000541377 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
CLASP1-215ENST00000541377 C1orf141Q5JVX7 400 aa11.31□□□□□ -0.6
CLASP1-215ENST00000541377 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
CLASP1-215ENST00000541377 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
CLASP1-215ENST00000541377 DCAF11Q8TEB1 546 aa11.29□□□□□ -0.6
CLASP1-215ENST00000541377 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLASP1-215ENST00000541377 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
CLASP1-215ENST00000541377 PPM1FP49593 454 aaPredicted RBP11.29□□□□□ -0.6
CLASP1-215ENST00000541377 ODF2Q5BJF6 829 aa11.28□□□□□ -0.6
CLASP1-215ENST00000541377 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
CLASP1-215ENST00000541377 SF3A1Q15459 793 aaKnown RBP11.27□□□□□ -0.61
CLASP1-215ENST00000541377 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
CLASP1-215ENST00000541377 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
CLASP1-215ENST00000541377 CCNB3Q8WWL7 1395 aa11.26□□□□□ -0.61
CLASP1-215ENST00000541377 TTC5Q8N0Z6 440 aa11.26□□□□□ -0.61
CLASP1-215ENST00000541377 KIF3AQ9Y496 699 aa11.26□□□□□ -0.61
CLASP1-215ENST00000541377 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
CLASP1-215ENST00000541377 LRRFIP1Q32MZ4 808 aaKnown RBP11.25□□□□□ -0.61
CLASP1-215ENST00000541377 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
CLASP1-215ENST00000541377 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLASP1-215ENST00000541377 ATF3P18847 181 aa11.24□□□□□ -0.61
CLASP1-215ENST00000541377 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
CLASP1-215ENST00000541377 CT47A1Q5JQC4 288 aaPredicted RBP11.23□□□□□ -0.61
CLASP1-215ENST00000541377 HMMRO75330 724 aa11.23□□□□□ -0.61
CLASP1-215ENST00000541377 SYAP1Q96A49 352 aaPredicted RBP11.23□□□□□ -0.61
CLASP1-215ENST00000541377 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms