RNA–Protein interactions for RNA: ENST00000541017.5

PPFIA2-204, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-204ENST00000541017 CD109Q6YHK3 1445 aa12.33□□□□□ -0.44
PPFIA2-204ENST00000541017 CFAP74Q9C0B2 1584 aa12.32□□□□□ -0.44
PPFIA2-204ENST00000541017 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
PPFIA2-204ENST00000541017 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
PPFIA2-204ENST00000541017 PLCH2O75038 1416 aa12.3□□□□□ -0.44
PPFIA2-204ENST00000541017 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
PPFIA2-204ENST00000541017 KIAA1107Q9UPP5 1409 aa12.29□□□□□ -0.44
PPFIA2-204ENST00000541017 ARAP3Q8WWN8 1544 aa12.28□□□□□ -0.44
PPFIA2-204ENST00000541017 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.45
PPFIA2-204ENST00000541017 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.45
PPFIA2-204ENST00000541017 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.45
PPFIA2-204ENST00000541017 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
PPFIA2-204ENST00000541017 CCDC141Q6ZP82 1450 aa12.26□□□□□ -0.45
PPFIA2-204ENST00000541017 NEO1Q92859 1461 aa12.26□□□□□ -0.45
PPFIA2-204ENST00000541017 ROCK1Q13464 1354 aa12.26□□□□□ -0.45
PPFIA2-204ENST00000541017 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
PPFIA2-204ENST00000541017 MAPKBP1O60336 1514 aa12.26□□□□□ -0.45
PPFIA2-204ENST00000541017 FANCAO15360 1455 aa12.24□□□□□ -0.45
PPFIA2-204ENST00000541017 GPATCH8Q9UKJ3 1502 aaKnown RBP12.24□□□□□ -0.45
PPFIA2-204ENST00000541017 AKNAQ7Z591 1439 aa12.24□□□□□ -0.45
PPFIA2-204ENST00000541017 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
PPFIA2-204ENST00000541017 ADCY10Q96PN6 1610 aa12.24□□□□□ -0.45
PPFIA2-204ENST00000541017 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
PPFIA2-204ENST00000541017 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
PPFIA2-204ENST00000541017 TCOF1Q13428 1488 aaKnown RBP12.23□□□□□ -0.45
PPFIA2-204ENST00000541017 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
PPFIA2-204ENST00000541017 RRP7BPQ9NSQ0 103 aa12.22□□□□□ -0.45
PPFIA2-204ENST00000541017 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
PPFIA2-204ENST00000541017 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
PPFIA2-204ENST00000541017 SCAPERQ9BY12 1400 aa12.22□□□□□ -0.45
PPFIA2-204ENST00000541017 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.46
PPFIA2-204ENST00000541017 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
PPFIA2-204ENST00000541017 DAPK1P53355 1430 aa12.2□□□□□ -0.46
PPFIA2-204ENST00000541017 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
PPFIA2-204ENST00000541017 MYO5CQ9NQX4 1742 aa12.2□□□□□ -0.46
PPFIA2-204ENST00000541017 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
PPFIA2-204ENST00000541017 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
PPFIA2-204ENST00000541017 TIMELESSQ9UNS1 1208 aa12.19□□□□□ -0.46
PPFIA2-204ENST00000541017 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
PPFIA2-204ENST00000541017 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
PPFIA2-204ENST00000541017 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
PPFIA2-204ENST00000541017 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
PPFIA2-204ENST00000541017 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
PPFIA2-204ENST00000541017 MAGI3Q5TCQ9 1506 aa12.17□□□□□ -0.46
PPFIA2-204ENST00000541017 GLI2P10070 1586 aa12.16□□□□□ -0.46
PPFIA2-204ENST00000541017 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
PPFIA2-204ENST00000541017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.46
PPFIA2-204ENST00000541017 ANKRD50Q9ULJ7 1429 aa12.15□□□□□ -0.46
PPFIA2-204ENST00000541017 ARHGEF5Q12774 1597 aa12.15□□□□□ -0.46
PPFIA2-204ENST00000541017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.47
PPFIA2-204ENST00000541017 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
PPFIA2-204ENST00000541017 PREX2Q70Z35 1606 aa12.14□□□□□ -0.47
PPFIA2-204ENST00000541017 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
PPFIA2-204ENST00000541017 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
PPFIA2-204ENST00000541017 RAB3GAP2Q9H2M9 1393 aa12.13□□□□□ -0.47
PPFIA2-204ENST00000541017 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
PPFIA2-204ENST00000541017 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
PPFIA2-204ENST00000541017 KIF3BO15066 747 aa12.12□□□□□ -0.47
PPFIA2-204ENST00000541017 NUP155O75694 1391 aa12.12□□□□□ -0.47
PPFIA2-204ENST00000541017 ABCC5O15440 1437 aa12.11□□□□□ -0.47
PPFIA2-204ENST00000541017 DNMT1P26358 1616 aaKnown RBP12.1□□□□□ -0.47
PPFIA2-204ENST00000541017 DUOX2Q9NRD8 1548 aa12.1□□□□□ -0.47
PPFIA2-204ENST00000541017 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
PPFIA2-204ENST00000541017 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
PPFIA2-204ENST00000541017 ERBINQ96RT1 1412 aa12.09□□□□□ -0.47
PPFIA2-204ENST00000541017 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
PPFIA2-204ENST00000541017 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
PPFIA2-204ENST00000541017 AFAP1Q8N556 730 aa12.07□□□□□ -0.48
PPFIA2-204ENST00000541017 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
PPFIA2-204ENST00000541017 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
PPFIA2-204ENST00000541017 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
PPFIA2-204ENST00000541017 GGT6Q6P531 493 aa12.06□□□□□ -0.48
PPFIA2-204ENST00000541017 ABCC1P33527 1531 aa12.06□□□□□ -0.48
PPFIA2-204ENST00000541017 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
PPFIA2-204ENST00000541017 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
PPFIA2-204ENST00000541017 MPHOSPH9Q99550 1183 aa12.05□□□□□ -0.48
PPFIA2-204ENST00000541017 NEUROD1Q13562 356 aa12.04□□□□□ -0.48
PPFIA2-204ENST00000541017 MLH3Q9UHC1 1453 aa12.03□□□□□ -0.48
PPFIA2-204ENST00000541017 NAIPQ13075 1403 aa12.03□□□□□ -0.48
PPFIA2-204ENST00000541017 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
PPFIA2-204ENST00000541017 A2MP01023 1474 aa12.03□□□□□ -0.48
PPFIA2-204ENST00000541017 MAST1Q9Y2H9 1570 aa12.03□□□□□ -0.48
PPFIA2-204ENST00000541017 ATP7AQ04656 1500 aa12.02□□□□□ -0.48
PPFIA2-204ENST00000541017 CDC42BPAQ5VT25 1732 aa12.02□□□□□ -0.48
PPFIA2-204ENST00000541017 PKD2Q13563 968 aa12.02□□□□□ -0.49
PPFIA2-204ENST00000541017 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
PPFIA2-204ENST00000541017 ATP10AO60312 1499 aa12□□□□□ -0.49
PPFIA2-204ENST00000541017 RAPGEF3O95398 923 aa12□□□□□ -0.49
PPFIA2-204ENST00000541017 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
PPFIA2-204ENST00000541017 SAMD9LQ8IVG5 1584 aa12□□□□□ -0.49
PPFIA2-204ENST00000541017 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
PPFIA2-204ENST00000541017 ZFYVE16Q7Z3T8 1539 aa12□□□□□ -0.49
PPFIA2-204ENST00000541017 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
PPFIA2-204ENST00000541017 MBD5Q9P267 1494 aa11.99□□□□□ -0.49
PPFIA2-204ENST00000541017 CCDC144AA2RUR9 1427 aa11.99□□□□□ -0.49
PPFIA2-204ENST00000541017 HECW2Q9P2P5 1572 aa11.98□□□□□ -0.49
PPFIA2-204ENST00000541017 PLXNC1O60486 1568 aa11.98□□□□□ -0.49
PPFIA2-204ENST00000541017 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
PPFIA2-204ENST00000541017 LRRIQ1Q96JM4 1722 aa11.97□□□□□ -0.49
PPFIA2-204ENST00000541017 FAM135AQ9P2D6 1515 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms