RNA–Protein interactions for RNA: ENST00000540688.1

NDUFA9-206, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2 BASIC

Gene NDUFA9, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-206ENST00000540688 PTPRMP28827 1452 aa17.44■□□□□ 0.38
NDUFA9-206ENST00000540688 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
NDUFA9-206ENST00000540688 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
NDUFA9-206ENST00000540688 ZFYVE16Q7Z3T8 1539 aa17.43■□□□□ 0.38
NDUFA9-206ENST00000540688 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
NDUFA9-206ENST00000540688 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
NDUFA9-206ENST00000540688 BCORL1Q5H9F3 1711 aa17.41■□□□□ 0.38
NDUFA9-206ENST00000540688 ADAMTSL3P82987 1691 aa17.4■□□□□ 0.38
NDUFA9-206ENST00000540688 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
NDUFA9-206ENST00000540688 YEATS2Q9ULM3 1422 aa17.39■□□□□ 0.38
NDUFA9-206ENST00000540688 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
NDUFA9-206ENST00000540688 PCF11O94913 1555 aaKnown RBP17.37■□□□□ 0.37
NDUFA9-206ENST00000540688 MADDQ8WXG6 1647 aa17.37■□□□□ 0.37
NDUFA9-206ENST00000540688 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
NDUFA9-206ENST00000540688 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
NDUFA9-206ENST00000540688 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
NDUFA9-206ENST00000540688 ATP10AO60312 1499 aa17.36■□□□□ 0.37
NDUFA9-206ENST00000540688 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
NDUFA9-206ENST00000540688 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.36
NDUFA9-206ENST00000540688 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
NDUFA9-206ENST00000540688 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
NDUFA9-206ENST00000540688 MTUS2Q5JR59 1369 aa17.3■□□□□ 0.36
NDUFA9-206ENST00000540688 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
NDUFA9-206ENST00000540688 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
NDUFA9-206ENST00000540688 PREX2Q70Z35 1606 aa17.26■□□□□ 0.35
NDUFA9-206ENST00000540688 CDC42BPBQ9Y5S2 1711 aa17.26■□□□□ 0.35
NDUFA9-206ENST00000540688 FER1L4A9Z1Z3 1794 aa17.24■□□□□ 0.35
NDUFA9-206ENST00000540688 KDM5CP41229 1560 aa17.23■□□□□ 0.35
NDUFA9-206ENST00000540688 SPAG9O60271 1321 aaKnown RBP17.23■□□□□ 0.35
NDUFA9-206ENST00000540688 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
NDUFA9-206ENST00000540688 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.35
NDUFA9-206ENST00000540688 HSPA2P54652 639 aa17.23■□□□□ 0.35
NDUFA9-206ENST00000540688 MLH3Q9UHC1 1453 aa17.23■□□□□ 0.35
NDUFA9-206ENST00000540688 ABCC1P33527 1531 aa17.22■□□□□ 0.35
NDUFA9-206ENST00000540688 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
NDUFA9-206ENST00000540688 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
NDUFA9-206ENST00000540688 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
NDUFA9-206ENST00000540688 PLEKHH2Q8IVE3 1493 aa17.2■□□□□ 0.34
NDUFA9-206ENST00000540688 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
NDUFA9-206ENST00000540688 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
NDUFA9-206ENST00000540688 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
NDUFA9-206ENST00000540688 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
NDUFA9-206ENST00000540688 SIGLEC1Q9BZZ2 1709 aa17.18■□□□□ 0.34
NDUFA9-206ENST00000540688 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
NDUFA9-206ENST00000540688 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
NDUFA9-206ENST00000540688 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
NDUFA9-206ENST00000540688 FBXO41Q8TF61 875 aa17.15■□□□□ 0.34
NDUFA9-206ENST00000540688 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
NDUFA9-206ENST00000540688 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
NDUFA9-206ENST00000540688 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
NDUFA9-206ENST00000540688 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
NDUFA9-206ENST00000540688 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
NDUFA9-206ENST00000540688 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
NDUFA9-206ENST00000540688 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
NDUFA9-206ENST00000540688 AGLP35573 1532 aa17.12■□□□□ 0.33
NDUFA9-206ENST00000540688 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
NDUFA9-206ENST00000540688 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
NDUFA9-206ENST00000540688 GGT6Q6P531 493 aa17.1■□□□□ 0.33
NDUFA9-206ENST00000540688 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
NDUFA9-206ENST00000540688 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
NDUFA9-206ENST00000540688 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
NDUFA9-206ENST00000540688 APLP2Q06481 763 aa17.07■□□□□ 0.32
NDUFA9-206ENST00000540688 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
NDUFA9-206ENST00000540688 A2MP01023 1474 aa17.06■□□□□ 0.32
NDUFA9-206ENST00000540688 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
NDUFA9-206ENST00000540688 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
NDUFA9-206ENST00000540688 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
NDUFA9-206ENST00000540688 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
NDUFA9-206ENST00000540688 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
NDUFA9-206ENST00000540688 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
NDUFA9-206ENST00000540688 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
NDUFA9-206ENST00000540688 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
NDUFA9-206ENST00000540688 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
NDUFA9-206ENST00000540688 C3P01024 1663 aa17.02■□□□□ 0.32
NDUFA9-206ENST00000540688 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
NDUFA9-206ENST00000540688 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
NDUFA9-206ENST00000540688 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
NDUFA9-206ENST00000540688 KIF3BO15066 747 aa16.99■□□□□ 0.31
NDUFA9-206ENST00000540688 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
NDUFA9-206ENST00000540688 NPATQ14207 1427 aa16.98■□□□□ 0.31
NDUFA9-206ENST00000540688 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
NDUFA9-206ENST00000540688 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
NDUFA9-206ENST00000540688 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
NDUFA9-206ENST00000540688 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
NDUFA9-206ENST00000540688 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
NDUFA9-206ENST00000540688 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
NDUFA9-206ENST00000540688 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
NDUFA9-206ENST00000540688 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
NDUFA9-206ENST00000540688 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
NDUFA9-206ENST00000540688 PTPRTO14522 1441 aa16.92■□□□□ 0.3
NDUFA9-206ENST00000540688 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
NDUFA9-206ENST00000540688 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
NDUFA9-206ENST00000540688 STRCQ7RTU9 1775 aa16.89■□□□□ 0.29
NDUFA9-206ENST00000540688 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
NDUFA9-206ENST00000540688 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
NDUFA9-206ENST00000540688 PKD2Q13563 968 aa16.88■□□□□ 0.29
NDUFA9-206ENST00000540688 NCKAP5LQ9HCH0 1330 aa16.88■□□□□ 0.29
NDUFA9-206ENST00000540688 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
NDUFA9-206ENST00000540688 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
NDUFA9-206ENST00000540688 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms