RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
DNMT1-203ENST00000540357 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
DNMT1-203ENST00000540357 PDE4AP27815 886 aa16.9■□□□□ 0.3
DNMT1-203ENST00000540357 PKD2Q13563 968 aa16.9■□□□□ 0.3
DNMT1-203ENST00000540357 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
DNMT1-203ENST00000540357 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.3
DNMT1-203ENST00000540357 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.3
DNMT1-203ENST00000540357 MSH5O43196 834 aa16.89■□□□□ 0.29
DNMT1-203ENST00000540357 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
DNMT1-203ENST00000540357 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
DNMT1-203ENST00000540357 RRP1P56182 461 aaKnown RBP16.88■□□□□ 0.29
DNMT1-203ENST00000540357 TMF1P82094 1093 aa16.87■□□□□ 0.29
DNMT1-203ENST00000540357 NLRP13Q86W25 1043 aa16.87■□□□□ 0.29
DNMT1-203ENST00000540357 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
DNMT1-203ENST00000540357 TRIM44Q96DX7 344 aaPredicted RBP16.86■□□□□ 0.29
DNMT1-203ENST00000540357 HFM1A2PYH4 1435 aa16.85■□□□□ 0.29
DNMT1-203ENST00000540357 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
DNMT1-203ENST00000540357 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
DNMT1-203ENST00000540357 CHMP7Q8WUX9 453 aaPredicted RBP16.83■□□□□ 0.28
DNMT1-203ENST00000540357 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
DNMT1-203ENST00000540357 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
DNMT1-203ENST00000540357 USP47Q96K76 1375 aa16.82■□□□□ 0.28
DNMT1-203ENST00000540357 GSE1Q14687 1217 aa16.81■□□□□ 0.28
DNMT1-203ENST00000540357 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
DNMT1-203ENST00000540357 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
DNMT1-203ENST00000540357 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
DNMT1-203ENST00000540357 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
DNMT1-203ENST00000540357 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-203ENST00000540357 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
DNMT1-203ENST00000540357 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
DNMT1-203ENST00000540357 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
DNMT1-203ENST00000540357 CFTRP13569 1480 aa16.77■□□□□ 0.28
DNMT1-203ENST00000540357 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
DNMT1-203ENST00000540357 NUP155O75694 1391 aa16.77■□□□□ 0.27
DNMT1-203ENST00000540357 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.27
DNMT1-203ENST00000540357 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
DNMT1-203ENST00000540357 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
DNMT1-203ENST00000540357 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-203ENST00000540357 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
DNMT1-203ENST00000540357 CFAP53Q96M91 514 aa16.74■□□□□ 0.27
DNMT1-203ENST00000540357 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
DNMT1-203ENST00000540357 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
DNMT1-203ENST00000540357 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
DNMT1-203ENST00000540357 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
DNMT1-203ENST00000540357 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-203ENST00000540357 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
DNMT1-203ENST00000540357 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-203ENST00000540357 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.26
DNMT1-203ENST00000540357 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
DNMT1-203ENST00000540357 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
DNMT1-203ENST00000540357 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
DNMT1-203ENST00000540357 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
DNMT1-203ENST00000540357 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
DNMT1-203ENST00000540357 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
DNMT1-203ENST00000540357 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■■■■ 31.8
DNMT1-203ENST00000540357 NAIPQ13075 1403 aa16.68■□□□□ 0.26
DNMT1-203ENST00000540357 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
DNMT1-203ENST00000540357 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
DNMT1-203ENST00000540357 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
DNMT1-203ENST00000540357 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
DNMT1-203ENST00000540357 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
DNMT1-203ENST00000540357 PLIN1O60240 522 aa16.65■□□□□ 0.26
DNMT1-203ENST00000540357 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
DNMT1-203ENST00000540357 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
DNMT1-203ENST00000540357 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
DNMT1-203ENST00000540357 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
DNMT1-203ENST00000540357 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-203ENST00000540357 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
DNMT1-203ENST00000540357 PTMSP20962 102 aa16.62■□□□□ 0.25
DNMT1-203ENST00000540357 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
DNMT1-203ENST00000540357 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
DNMT1-203ENST00000540357 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
DNMT1-203ENST00000540357 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
DNMT1-203ENST00000540357 SLC4A3P48751 1232 aa16.62■□□□□ 0.25
DNMT1-203ENST00000540357 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
DNMT1-203ENST00000540357 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
DNMT1-203ENST00000540357 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
DNMT1-203ENST00000540357 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
DNMT1-203ENST00000540357 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
DNMT1-203ENST00000540357 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
DNMT1-203ENST00000540357 NCOA1Q15788 1441 aa16.59■□□□□ 0.25
DNMT1-203ENST00000540357 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.25
DNMT1-203ENST00000540357 PANK3Q9H999 370 aa16.58■□□□□ 0.25
DNMT1-203ENST00000540357 PTPN23Q9H3S7 1636 aa16.57■□□□□ 0.24
DNMT1-203ENST00000540357 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
DNMT1-203ENST00000540357 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
DNMT1-203ENST00000540357 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
DNMT1-203ENST00000540357 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
DNMT1-203ENST00000540357 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
DNMT1-203ENST00000540357 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
DNMT1-203ENST00000540357 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-203ENST00000540357 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
DNMT1-203ENST00000540357 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
DNMT1-203ENST00000540357 CGNL1Q0VF96 1302 aa16.55■□□□□ 0.24
DNMT1-203ENST00000540357 CASC1Q6TDU7 716 aa16.54■□□□□ 0.24
DNMT1-203ENST00000540357 ANO8Q9HCE9 1232 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-203ENST00000540357 E9PSI1 815 aa16.53■□□□□ 0.24
DNMT1-203ENST00000540357 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
DNMT1-203ENST00000540357 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
DNMT1-203ENST00000540357 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms