RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 MYO5CQ9NQX4 1742 aa11.17□□□□□ -0.62
LPCAT3-209ENST00000540060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.16□□□□□ -0.62
LPCAT3-209ENST00000540060 FAM69CQ0P6D2 419 aa11.16□□□□□ -0.62
LPCAT3-209ENST00000540060 TROQ12816 1431 aaPredicted RBP11.15□□□□□ -0.62
LPCAT3-209ENST00000540060 EHBP1L1Q8N3D4 1523 aa11.14□□□□□ -0.63
LPCAT3-209ENST00000540060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
LPCAT3-209ENST00000540060 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
LPCAT3-209ENST00000540060 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
LPCAT3-209ENST00000540060 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
LPCAT3-209ENST00000540060 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
LPCAT3-209ENST00000540060 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
LPCAT3-209ENST00000540060 CFAP74Q9C0B2 1584 aa11.12□□□□□ -0.63
LPCAT3-209ENST00000540060 MAP3K1Q13233 1512 aa11.12□□□□□ -0.63
LPCAT3-209ENST00000540060 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
LPCAT3-209ENST00000540060 KDM6BO15054 1643 aa11.11□□□□□ -0.63
LPCAT3-209ENST00000540060 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
LPCAT3-209ENST00000540060 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
LPCAT3-209ENST00000540060 CDC42BPBQ9Y5S2 1711 aa11.11□□□□□ -0.63
LPCAT3-209ENST00000540060 CD109Q6YHK3 1445 aa11.1□□□□□ -0.63
LPCAT3-209ENST00000540060 LHX8Q68G74 356 aa11.1□□□□□ -0.63
LPCAT3-209ENST00000540060 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
LPCAT3-209ENST00000540060 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
LPCAT3-209ENST00000540060 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
LPCAT3-209ENST00000540060 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
LPCAT3-209ENST00000540060 LRRC9Q6ZRR7 1453 aa11.07□□□□□ -0.64
LPCAT3-209ENST00000540060 HAX1O00165 279 aa11.07□□□□□ -0.64
LPCAT3-209ENST00000540060 MTUS2Q5JR59 1369 aa11.06□□□□□ -0.64
LPCAT3-209ENST00000540060 NEO1Q92859 1461 aa11.06□□□□□ -0.64
LPCAT3-209ENST00000540060 RICTORQ6R327 1708 aa11.05□□□□□ -0.64
LPCAT3-209ENST00000540060 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
LPCAT3-209ENST00000540060 FANCAO15360 1455 aa11.05□□□□□ -0.64
LPCAT3-209ENST00000540060 FRMPD1Q5SYB0 1578 aa11.04□□□□□ -0.64
LPCAT3-209ENST00000540060 PLCH2O75038 1416 aa11.04□□□□□ -0.64
LPCAT3-209ENST00000540060 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
LPCAT3-209ENST00000540060 NCOA2Q15596 1464 aa11.03□□□□□ -0.64
LPCAT3-209ENST00000540060 COL17A1Q9UMD9 1497 aaPredicted RBP11.02□□□□□ -0.65
LPCAT3-209ENST00000540060 SAMD9LQ8IVG5 1584 aa11.02□□□□□ -0.65
LPCAT3-209ENST00000540060 ABCC1P33527 1531 aa11.01□□□□□ -0.65
LPCAT3-209ENST00000540060 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-209ENST00000540060 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
LPCAT3-209ENST00000540060 AKNAQ7Z591 1439 aa11□□□□□ -0.65
LPCAT3-209ENST00000540060 ADGRL1O94910 1474 aa10.99□□□□□ -0.65
LPCAT3-209ENST00000540060 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
LPCAT3-209ENST00000540060 CCNB3Q8WWL7 1395 aa10.98□□□□□ -0.65
LPCAT3-209ENST00000540060 ZMYM4Q5VZL5 1548 aa10.98□□□□□ -0.65
LPCAT3-209ENST00000540060 KDM5CP41229 1560 aa10.97□□□□□ -0.65
LPCAT3-209ENST00000540060 SYCP2Q9BX26 1530 aa10.96□□□□□ -0.65
LPCAT3-209ENST00000540060 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.65
LPCAT3-209ENST00000540060 APLP2Q06481 763 aa10.96□□□□□ -0.65
LPCAT3-209ENST00000540060 ARHGEF40Q8TER5 1519 aa10.95□□□□□ -0.66
LPCAT3-209ENST00000540060 DENND4BO75064 1496 aaPredicted RBP10.95□□□□□ -0.66
LPCAT3-209ENST00000540060 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
LPCAT3-209ENST00000540060 ARHGEF12Q9NZN5 1544 aa10.94□□□□□ -0.66
LPCAT3-209ENST00000540060 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
LPCAT3-209ENST00000540060 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
LPCAT3-209ENST00000540060 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
LPCAT3-209ENST00000540060 ZNF518AQ6AHZ1 1483 aa10.93□□□□□ -0.66
LPCAT3-209ENST00000540060 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
LPCAT3-209ENST00000540060 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
LPCAT3-209ENST00000540060 CROCC2H7BZ55 1655 aa10.93□□□□□ -0.66
LPCAT3-209ENST00000540060 ABCB7O75027 752 aa10.93□□□□□ -0.66
LPCAT3-209ENST00000540060 PTPN23Q9H3S7 1636 aa10.92□□□□□ -0.66
LPCAT3-209ENST00000540060 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
LPCAT3-209ENST00000540060 ABCA6Q8N139 1617 aa10.91□□□□□ -0.66
LPCAT3-209ENST00000540060 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
LPCAT3-209ENST00000540060 KIDINS220Q9ULH0 1771 aa10.91□□□□□ -0.66
LPCAT3-209ENST00000540060 ZFYVE16Q7Z3T8 1539 aa10.91□□□□□ -0.66
LPCAT3-209ENST00000540060 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
LPCAT3-209ENST00000540060 KIAA1107Q9UPP5 1409 aa10.91□□□□□ -0.66
LPCAT3-209ENST00000540060 SIGLEC1Q9BZZ2 1709 aa10.9□□□□□ -0.66
LPCAT3-209ENST00000540060 CFDP1Q9UEE9 299 aaPredicted RBP10.9□□□□□ -0.66
LPCAT3-209ENST00000540060 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
LPCAT3-209ENST00000540060 DIP2CQ9Y2E4 1556 aa10.9□□□□□ -0.67
LPCAT3-209ENST00000540060 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
LPCAT3-209ENST00000540060 MBD5Q9P267 1494 aa10.89□□□□□ -0.67
LPCAT3-209ENST00000540060 RAPGEF3O95398 923 aa10.89□□□□□ -0.67
LPCAT3-209ENST00000540060 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
LPCAT3-209ENST00000540060 FGD6Q6ZV73 1430 aa10.89□□□□□ -0.67
LPCAT3-209ENST00000540060 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
LPCAT3-209ENST00000540060 TCOF1Q13428 1488 aaKnown RBP10.88□□□□□ -0.67
LPCAT3-209ENST00000540060 DNMT1P26358 1616 aaKnown RBP10.88□□□□□ -0.67
LPCAT3-209ENST00000540060 ATP7AQ04656 1500 aa10.88□□□□□ -0.67
LPCAT3-209ENST00000540060 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
LPCAT3-209ENST00000540060 MLH3Q9UHC1 1453 aa10.87□□□□□ -0.67
LPCAT3-209ENST00000540060 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
LPCAT3-209ENST00000540060 ZNF644Q9H582 1327 aaPredicted RBP10.86□□□□□ -0.67
LPCAT3-209ENST00000540060 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
LPCAT3-209ENST00000540060 MAST1Q9Y2H9 1570 aa10.86□□□□□ -0.67
LPCAT3-209ENST00000540060 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
LPCAT3-209ENST00000540060 PLXNC1O60486 1568 aa10.84□□□□□ -0.67
LPCAT3-209ENST00000540060 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
LPCAT3-209ENST00000540060 SHANK2Q9UPX8 1470 aa10.83□□□□□ -0.68
LPCAT3-209ENST00000540060 HNRNPMP52272 730 aaKnown RBP eCLIP10.83□□□□□ -0.68
LPCAT3-209ENST00000540060 AFAP1Q8N556 730 aa10.83□□□□□ -0.68
LPCAT3-209ENST00000540060 EVX2Q03828 476 aa10.82□□□□□ -0.68
LPCAT3-209ENST00000540060 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
LPCAT3-209ENST00000540060 ATP10AO60312 1499 aa10.81□□□□□ -0.68
LPCAT3-209ENST00000540060 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
LPCAT3-209ENST00000540060 RTEL1-TNFRSF6BF6WH68 1400 aa10.81□□□□□ -0.68
LPCAT3-209ENST00000540060 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms