RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 STK25O00506 426 aa8.43□□□□□ -1.06
C2CD3-214ENST00000540057 SNPHO15079 494 aa8.43□□□□□ -1.06
C2CD3-214ENST00000540057 G3V3G9 751 aa8.42□□□□□ -1.06
C2CD3-214ENST00000540057 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
C2CD3-214ENST00000540057 PCDH10Q9P2E7 1040 aa8.42□□□□□ -1.06
C2CD3-214ENST00000540057 TMEM92Q6UXU6 159 aa8.41□□□□□ -1.06
C2CD3-214ENST00000540057 DCAF1Q9Y4B6 1507 aa8.4□□□□□ -1.06
C2CD3-214ENST00000540057 NLRP6P59044 892 aa8.4□□□□□ -1.06
C2CD3-214ENST00000540057 HOXB3P14651 431 aaPredicted RBP8.39□□□□□ -1.07
C2CD3-214ENST00000540057 PLSCR2Q9NRY7 297 aa8.38□□□□□ -1.07
C2CD3-214ENST00000540057 ERCC6Q03468 1493 aa8.38□□□□□ -1.07
C2CD3-214ENST00000540057 ZCCHC6Q5VYS8 1495 aaKnown RBP8.38□□□□□ -1.07
C2CD3-214ENST00000540057 MARVELD3Q96A59 401 aa8.37□□□□□ -1.07
C2CD3-214ENST00000540057 CDAN1Q8IWY9 1227 aa8.36□□□□□ -1.07
C2CD3-214ENST00000540057 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
C2CD3-214ENST00000540057 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
C2CD3-214ENST00000540057 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
C2CD3-214ENST00000540057 EMP3P54852 163 aa8.3□□□□□ -1.08
C2CD3-214ENST00000540057 PPP1R37O75864 691 aa8.28□□□□□ -1.08
C2CD3-214ENST00000540057 HOXB1P14653 301 aaPredicted RBP8.28□□□□□ -1.08
C2CD3-214ENST00000540057 DOK7Q18PE1 504 aa8.28□□□□□ -1.08
C2CD3-214ENST00000540057 KIF3CO14782 793 aa8.27□□□□□ -1.09
C2CD3-214ENST00000540057 HS3ST6Q96QI5 342 aa8.27□□□□□ -1.09
C2CD3-214ENST00000540057 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
C2CD3-214ENST00000540057 ZNF710Q8N1W2 664 aa8.25□□□□□ -1.09
C2CD3-214ENST00000540057 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
C2CD3-214ENST00000540057 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
C2CD3-214ENST00000540057 NESP48681 1621 aa8.24□□□□□ -1.09
C2CD3-214ENST00000540057 C2orf72A6NCS6 295 aa8.23□□□□□ -1.09
C2CD3-214ENST00000540057 GPR153Q6NV75 609 aa8.23□□□□□ -1.09
C2CD3-214ENST00000540057 NCAPD3P42695 1498 aa8.23□□□□□ -1.09
C2CD3-214ENST00000540057 RIMBP2O15034 1052 aa8.22□□□□□ -1.09
C2CD3-214ENST00000540057 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
C2CD3-214ENST00000540057 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
C2CD3-214ENST00000540057 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
C2CD3-214ENST00000540057 THOC2Q8NI27 1593 aaKnown RBP8.22□□□□□ -1.09
C2CD3-214ENST00000540057 ARSIQ5FYB1 569 aa8.17□□□□□ -1.1
C2CD3-214ENST00000540057 SPNS2Q8IVW8 549 aa8.17□□□□□ -1.1
C2CD3-214ENST00000540057 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.1
C2CD3-214ENST00000540057 ERBB3P21860 1342 aa8.16□□□□□ -1.1
C2CD3-214ENST00000540057 ATAD2BQ9ULI0 1458 aa8.15□□□□□ -1.1
C2CD3-214ENST00000540057 VARS2Q5ST30 1063 aaKnown RBP8.15□□□□□ -1.1
C2CD3-214ENST00000540057 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
C2CD3-214ENST00000540057 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
C2CD3-214ENST00000540057 SLC34A2O95436 690 aa8.13□□□□□ -1.11
C2CD3-214ENST00000540057 MMRN1Q13201 1228 aa8.13□□□□□ -1.11
C2CD3-214ENST00000540057 HMGXB3Q12766 1538 aa8.12□□□□□ -1.11
C2CD3-214ENST00000540057 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
C2CD3-214ENST00000540057 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
C2CD3-214ENST00000540057 GTPBP6O43824 516 aaPredicted RBP8.1□□□□□ -1.11
C2CD3-214ENST00000540057 PCDHGA4Q9Y5G9 962 aa8.1□□□□□ -1.11
C2CD3-214ENST00000540057 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
C2CD3-214ENST00000540057 NUDT7P0C024 238 aa8.09□□□□□ -1.11
C2CD3-214ENST00000540057 FOXK1P85037 733 aa8.09□□□□□ -1.11
C2CD3-214ENST00000540057 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
C2CD3-214ENST00000540057 GPHNQ9NQX3 736 aaPredicted RBP8.09□□□□□ -1.11
C2CD3-214ENST00000540057 DSG2Q14126 1118 aa8.08□□□□□ -1.12
C2CD3-214ENST00000540057 RYDENQ9NUL5 291 aaKnown RBP8.08□□□□□ -1.12
C2CD3-214ENST00000540057 BAZ1AQ9NRL2 1556 aaPredicted RBP8.07□□□□□ -1.12
C2CD3-214ENST00000540057 KDM4FA0A1W2PPD8 638 aa8.07□□□□□ -1.12
C2CD3-214ENST00000540057 PLPP6Q8IY26 295 aa8.07□□□□□ -1.12
C2CD3-214ENST00000540057 CRISPLD2Q9H0B8 497 aa8.07□□□□□ -1.12
C2CD3-214ENST00000540057 PDS5BQ9NTI5 1447 aa8.05□□□□□ -1.12
C2CD3-214ENST00000540057 PTCD2Q8WV60 388 aaKnown RBP8.05□□□□□ -1.12
C2CD3-214ENST00000540057 SMARCA4P51532 1647 aa8.04□□□□□ -1.12
C2CD3-214ENST00000540057 LHX6Q9UPM6 363 aa8.04□□□□□ -1.12
C2CD3-214ENST00000540057 BAZ1BQ9UIG0 1483 aaKnown RBP8.04□□□□□ -1.12
C2CD3-214ENST00000540057 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
C2CD3-214ENST00000540057 POTEEQ6S8J3 1075 aa8.02□□□□□ -1.13
C2CD3-214ENST00000540057 MRC2Q9UBG0 1479 aa8.01□□□□□ -1.13
C2CD3-214ENST00000540057 WDR62O43379 1518 aa8.01□□□□□ -1.13
C2CD3-214ENST00000540057 RIMBP3CA6NJZ7 1639 aa8□□□□□ -1.13
C2CD3-214ENST00000540057 RIMBP3BA6NNM3 1639 aa8□□□□□ -1.13
C2CD3-214ENST00000540057 RIMBP3Q9UFD9 1639 aa8□□□□□ -1.13
C2CD3-214ENST00000540057 PPP1R15BQ5SWA1 713 aa7.99□□□□□ -1.13
C2CD3-214ENST00000540057 OXER1Q8TDS5 423 aa7.99□□□□□ -1.13
C2CD3-214ENST00000540057 LSM11P83369 360 aaKnown RBP eCLIP7.97□□□□□ -1.13
C2CD3-214ENST00000540057 CADPS2Q86UW7 1296 aa7.97□□□□□ -1.13
C2CD3-214ENST00000540057 PEG3Q9GZU2 1588 aa7.97□□□□□ -1.13
C2CD3-214ENST00000540057 PBX2P40425 430 aa7.96□□□□□ -1.14
C2CD3-214ENST00000540057 MFSD10Q14728 455 aa7.96□□□□□ -1.14
C2CD3-214ENST00000540057 RTN4Q9NQC3 1192 aaKnown RBP7.96□□□□□ -1.14
C2CD3-214ENST00000540057 CADPSQ9ULU8 1353 aa7.96□□□□□ -1.14
C2CD3-214ENST00000540057 PDE4AP27815 886 aa7.95□□□□□ -1.14
C2CD3-214ENST00000540057 AMER1Q5JTC6 1135 aaPredicted RBP7.95□□□□□ -1.14
C2CD3-214ENST00000540057 UPF1Q92900 1129 aaKnown RBP eCLIP7.95□□□□□ -1.14
C2CD3-214ENST00000540057 AXIN2Q9Y2T1 843 aa7.95□□□□□ -1.14
C2CD3-214ENST00000540057 ARHGEF11O15085 1522 aa7.93□□□□□ -1.14
C2CD3-214ENST00000540057 PSDA5PKW4 1024 aaPredicted RBP7.93□□□□□ -1.14
C2CD3-214ENST00000540057 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
C2CD3-214ENST00000540057 LARP6Q9BRS8 491 aaKnown RBP7.93□□□□□ -1.14
C2CD3-214ENST00000540057 TBC1D12O60347 775 aa7.92□□□□□ -1.14
C2CD3-214ENST00000540057 ANKRD13DQ6ZTN6 518 aa7.92□□□□□ -1.14
C2CD3-214ENST00000540057 BBXQ8WY36 941 aaPredicted RBP7.92□□□□□ -1.14
C2CD3-214ENST00000540057 DDX27Q96GQ7 796 aaKnown RBP7.92□□□□□ -1.14
C2CD3-214ENST00000540057 MYT1LQ9UL68 1186 aa7.92□□□□□ -1.14
C2CD3-214ENST00000540057 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
C2CD3-214ENST00000540057 PTGER2P43116 358 aa7.9□□□□□ -1.14
C2CD3-214ENST00000540057 CYB5RLQ6IPT4 315 aa7.9□□□□□ -1.14
C2CD3-214ENST00000540057 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms