RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.43	□□□□□ -0.58
ECHDC2-222	ENST00000539680	TULP1	O00294	542 aa	Predicted RBP	11.43	□□□□□ -0.58
ECHDC2-222	ENST00000539680	SRPK2	P78362	688 aa	Known RBP	11.42	□□□□□ -0.58
ECHDC2-222	ENST00000539680	MSN	P26038	577 aa	Known RBP	11.42	□□□□□ -0.58
ECHDC2-222	ENST00000539680	PLCB2	Q00722	1185 aa		11.42	□□□□□ -0.58
ECHDC2-222	ENST00000539680	KIAA2012	Q0VF49	1180 aa		11.42	□□□□□ -0.58
ECHDC2-222	ENST00000539680	CUX2	O14529	1486 aa		11.41	□□□□□ -0.58
ECHDC2-222	ENST00000539680	DCAF11	Q8TEB1	546 aa		11.41	□□□□□ -0.58
ECHDC2-222	ENST00000539680	HDAC5	Q9UQL6	1122 aa		11.41	□□□□□ -0.58
ECHDC2-222	ENST00000539680	GNL2	Q13823	731 aa	Known RBP	11.4	□□□□□ -0.58
ECHDC2-222	ENST00000539680	RALBP1	Q15311	655 aa		11.4	□□□□□ -0.58
ECHDC2-222	ENST00000539680	TPRN	Q4KMQ1	711 aa		11.4	□□□□□ -0.58
ECHDC2-222	ENST00000539680	SMARCA2	P51531	1590 aa		11.4	□□□□□ -0.59
ECHDC2-222	ENST00000539680	KIAA1211	Q6ZU35	1233 aa		11.39	□□□□□ -0.59
ECHDC2-222	ENST00000539680	MYO15B	Q96JP2	1530 aa		11.39	□□□□□ -0.59
ECHDC2-222	ENST00000539680	TPM4	P67936	248 aa		11.38	□□□□□ -0.59
ECHDC2-222	ENST00000539680	GBP4	Q96PP9	640 aa		11.38	□□□□□ -0.59
ECHDC2-222	ENST00000539680	DRC7	Q8IY82	874 aa		11.38	□□□□□ -0.59
ECHDC2-222	ENST00000539680	GPATCH3	Q96I76	525 aa		11.38	□□□□□ -0.59
ECHDC2-222	ENST00000539680	FMN1	Q68DA7	1419 aa		11.38	□□□□□ -0.59
ECHDC2-222	ENST00000539680	RWDD1	Q9H446	243 aa	Predicted RBP	11.38	□□□□□ -0.59
ECHDC2-222	ENST00000539680	TMX4	Q9H1E5	349 aa	Predicted RBP	11.37	□□□□□ -0.59
ECHDC2-222	ENST00000539680	SYAP1	Q96A49	352 aa	Predicted RBP	11.37	□□□□□ -0.59
ECHDC2-222	ENST00000539680	CSPP1	Q1MSJ5	1256 aa		11.36	□□□□□ -0.59
ECHDC2-222	ENST00000539680	PMFBP1	Q8TBY8	1022 aa		11.36	□□□□□ -0.59
ECHDC2-222	ENST00000539680	SIN3A	Q96ST3	1273 aa		11.36	□□□□□ -0.59
ECHDC2-222	ENST00000539680	ANKRD30A	Q9BXX3	1397 aa		11.36	□□□□□ -0.59
ECHDC2-222	ENST00000539680	ROCK2	O75116	1388 aa	Known RBP	11.36	□□□□□ -0.59
ECHDC2-222	ENST00000539680	CCDC34	Q96HJ3	373 aa		11.36	□□□□□ -0.59
ECHDC2-222	ENST00000539680	CLSTN1	O94985	981 aa		11.35	□□□□□ -0.59
ECHDC2-222	ENST00000539680	PDS5B	Q9NTI5	1447 aa		11.35	□□□□□ -0.59
ECHDC2-222	ENST00000539680	VPS8	Q8N3P4	1428 aa		11.35	□□□□□ -0.59
ECHDC2-222	ENST00000539680	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.35	□□□□□ -0.59
ECHDC2-222	ENST00000539680	SPAG9	O60271	1321 aa	Known RBP	11.34	□□□□□ -0.59
ECHDC2-222	ENST00000539680	USP35	Q9P2H5	1018 aa		11.33	□□□□□ -0.6
ECHDC2-222	ENST00000539680	HSPA5	P11021	654 aa	Known RBP	11.33	□□□□□ -0.6
ECHDC2-222	ENST00000539680	LMOD3	Q0VAK6	560 aa		11.33	□□□□□ -0.6
ECHDC2-222	ENST00000539680	PHLDB1	Q86UU1	1377 aa		11.32	□□□□□ -0.6
ECHDC2-222	ENST00000539680	TAOK2	Q9UL54	1235 aa		11.32	□□□□□ -0.6
ECHDC2-222	ENST00000539680	HMMR	O75330	724 aa		11.31	□□□□□ -0.6
ECHDC2-222	ENST00000539680	TCERG1	O14776	1098 aa	Known RBP	11.31	□□□□□ -0.6
ECHDC2-222	ENST00000539680	PRKCSH	P14314	528 aa	Predicted RBP	11.3	□□□□□ -0.6
ECHDC2-222	ENST00000539680	RSPH4A	Q5TD94	716 aa		11.3	□□□□□ -0.6
ECHDC2-222	ENST00000539680	STK31	Q9BXU1	1019 aa		11.3	□□□□□ -0.6
ECHDC2-222	ENST00000539680	PKD2	Q13563	968 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	TERF2IP	Q9NYB0	399 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	ISY1	Q9ULR0	285 aa	Known RBP	11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	CHMP4C	Q96CF2	233 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	EFCAB2	Q5VUJ9	269 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	ITPRIP	Q8IWB1	547 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	UACA	Q9BZF9	1416 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	CSB-PGBD3	P0DP91	1061 aa		11.29	□□□□□ -0.6
ECHDC2-222	ENST00000539680	CCDC18	Q5T9S5	1454 aa		11.28	□□□□□ -0.6
ECHDC2-222	ENST00000539680	B4GALNT3	Q6L9W6	998 aa		11.28	□□□□□ -0.6
ECHDC2-222	ENST00000539680	TRH	P20396	242 aa	Predicted RBP	11.27	□□□□□ -0.6
ECHDC2-222	ENST00000539680	RCAN3	Q9UKA8	241 aa		11.27	□□□□□ -0.6
ECHDC2-222	ENST00000539680	NOC3L	Q8WTT2	800 aa	Known RBP	11.27	□□□□□ -0.61
ECHDC2-222	ENST00000539680	DNAJC5	Q9H3Z4	198 aa		11.27	□□□□□ -0.61
ECHDC2-222	ENST00000539680	PDE3B	Q13370	1112 aa		11.26	□□□□□ -0.61
ECHDC2-222	ENST00000539680	MLEC	Q14165	292 aa		11.26	□□□□□ -0.61
ECHDC2-222	ENST00000539680	EID1	Q9Y6B2	187 aa		11.26	□□□□□ -0.61
ECHDC2-222	ENST00000539680	PHF14	O94880	888 aa		11.26	□□□□□ -0.61
ECHDC2-222	ENST00000539680	SOGA1	O94964	1423 aa		11.26	□□□□□ -0.61
ECHDC2-222	ENST00000539680	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	GORAB	Q5T7V8	394 aa		11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	NUP155	O75694	1391 aa		11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	KIF3A	Q9Y496	699 aa		11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	PAK3	O75914	559 aa	Predicted RBP	11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	GGT6	Q6P531	493 aa		11.25	□□□□□ -0.61
ECHDC2-222	ENST00000539680	HSP90B1	P14625	803 aa	Known RBP	11.24	□□□□□ -0.61
ECHDC2-222	ENST00000539680	TAF7L	Q5H9L4	462 aa		11.24	□□□□□ -0.61
ECHDC2-222	ENST00000539680	MPHOSPH9	Q99550	1183 aa		11.24	□□□□□ -0.61
ECHDC2-222	ENST00000539680	STK26	Q9P289	416 aa		11.24	□□□□□ -0.61
ECHDC2-222	ENST00000539680	SOX12	O15370	315 aa		11.24	□□□□□ -0.61
ECHDC2-222	ENST00000539680	SENP3-EIF4A1	A0A087X0R7	540 aa		11.23	□□□□□ -0.61
ECHDC2-222	ENST00000539680	TOP2A	P11388	1531 aa	Known RBP	11.23	□□□□□ -0.61
ECHDC2-222	ENST00000539680	CCDC88B	A6NC98	1476 aa		11.23	□□□□□ -0.61
ECHDC2-222	ENST00000539680	GOLGA6L1	Q8N7Z2	621 aa		11.22	□□□□□ -0.61
ECHDC2-222	ENST00000539680	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
ECHDC2-222	ENST00000539680	KIF15	Q9NS87	1388 aa		11.22	□□□□□ -0.61
ECHDC2-222	ENST00000539680	RAPGEF2	Q9Y4G8	1499 aa		11.21	□□□□□ -0.61
ECHDC2-222	ENST00000539680	RAB3GAP2	Q9H2M9	1393 aa		11.21	□□□□□ -0.62
ECHDC2-222	ENST00000539680	SMC4	Q9NTJ3	1288 aa		11.2	□□□□□ -0.62
ECHDC2-222	ENST00000539680	SPRYD3	Q8NCJ5	442 aa		11.2	□□□□□ -0.62
ECHDC2-222	ENST00000539680	GOLGA6L3	A6NEY3	463 aa		11.2	□□□□□ -0.62
ECHDC2-222	ENST00000539680		G3V3G9	751 aa		11.19	□□□□□ -0.62
ECHDC2-222	ENST00000539680	ST18	O60284	1047 aa		11.19	□□□□□ -0.62
ECHDC2-222	ENST00000539680	DCAF8	Q5TAQ9	597 aa		11.19	□□□□□ -0.62
ECHDC2-222	ENST00000539680	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.19	□□□□□ -0.62
ECHDC2-222	ENST00000539680	DEK	P35659	375 aa	Known RBP	11.19	□□□□□ -0.62
ECHDC2-222	ENST00000539680	TRIM6-TRIM34	B2RNG4	842 aa		11.18	□□□□□ -0.62
ECHDC2-222	ENST00000539680	APBB1	O00213	710 aa		11.18	□□□□□ -0.62
ECHDC2-222	ENST00000539680	KIF16B	Q96L93	1317 aa		11.18	□□□□□ -0.62
ECHDC2-222	ENST00000539680	CHMP3	Q9Y3E7	222 aa		11.17	□□□□□ -0.62
ECHDC2-222	ENST00000539680	DDX11L8	A8MPP1	907 aa		11.17	□□□□□ -0.62
ECHDC2-222	ENST00000539680	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.17	□□□□□ -0.62
ECHDC2-222	ENST00000539680	RASSF8	Q8NHQ8	419 aa		11.17	□□□□□ -0.62
ECHDC2-222	ENST00000539680	CECR2	Q9BXF3	1484 aa		11.17	□□□□□ -0.62
ECHDC2-222	ENST00000539680	TPM3	P06753	285 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms