RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-211	ENST00000539318	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.99	□□□□□ -0.17
NPIPB4-211	ENST00000539318	MYO5C	Q9NQX4	1742 aa		13.98	□□□□□ -0.17
NPIPB4-211	ENST00000539318	EFCAB2	Q5VUJ9	269 aa		13.98	□□□□□ -0.17
NPIPB4-211	ENST00000539318	NEO1	Q92859	1461 aa		13.98	□□□□□ -0.17
NPIPB4-211	ENST00000539318	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.98	□□□□□ -0.17
NPIPB4-211	ENST00000539318	CCNB3	Q8WWL7	1395 aa		13.96	□□□□□ -0.17
NPIPB4-211	ENST00000539318	FANCA	O15360	1455 aa		13.96	□□□□□ -0.17
NPIPB4-211	ENST00000539318	AKNA	Q7Z591	1439 aa		13.96	□□□□□ -0.18
NPIPB4-211	ENST00000539318	PREX2	Q70Z35	1606 aa		13.95	□□□□□ -0.18
NPIPB4-211	ENST00000539318	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.93	□□□□□ -0.18
NPIPB4-211	ENST00000539318	ARHGAP5	Q13017	1502 aa		13.91	□□□□□ -0.18
NPIPB4-211	ENST00000539318	ZNF644	Q9H582	1327 aa	Predicted RBP	13.9	□□□□□ -0.18
NPIPB4-211	ENST00000539318	KDM6B	O15054	1643 aa		13.9	□□□□□ -0.18
NPIPB4-211	ENST00000539318	RAPGEF3	O95398	923 aa		13.9	□□□□□ -0.18
NPIPB4-211	ENST00000539318	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.9	□□□□□ -0.18
NPIPB4-211	ENST00000539318	CFAP74	Q9C0B2	1584 aa		13.9	□□□□□ -0.18
NPIPB4-211	ENST00000539318	ARHGEF12	Q9NZN5	1544 aa		13.9	□□□□□ -0.19
NPIPB4-211	ENST00000539318	SCAPER	Q9BY12	1400 aa		13.9	□□□□□ -0.19
NPIPB4-211	ENST00000539318	MYOM3	Q5VTT5	1437 aa		13.89	□□□□□ -0.19
NPIPB4-211	ENST00000539318	ITSN2	Q9NZM3	1697 aa		13.88	□□□□□ -0.19
NPIPB4-211	ENST00000539318	SAMD9L	Q8IVG5	1584 aa		13.88	□□□□□ -0.19
NPIPB4-211	ENST00000539318	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.88	□□□□□ -0.19
NPIPB4-211	ENST00000539318	MIA2	Q96PC5	1412 aa		13.88	□□□□□ -0.19
NPIPB4-211	ENST00000539318	KIAA1107	Q9UPP5	1409 aa		13.88	□□□□□ -0.19
NPIPB4-211	ENST00000539318	DENND4B	O75064	1496 aa	Predicted RBP	13.87	□□□□□ -0.19
NPIPB4-211	ENST00000539318	ADGRL1	O94910	1474 aa		13.87	□□□□□ -0.19
NPIPB4-211	ENST00000539318	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
NPIPB4-211	ENST00000539318	AFAP1	Q8N556	730 aa		13.86	□□□□□ -0.19
NPIPB4-211	ENST00000539318	RICTOR	Q6R327	1708 aa		13.86	□□□□□ -0.19
NPIPB4-211	ENST00000539318	ABCC1	P33527	1531 aa		13.85	□□□□□ -0.19
NPIPB4-211	ENST00000539318	MBD5	Q9P267	1494 aa		13.85	□□□□□ -0.19
NPIPB4-211	ENST00000539318	FRMPD1	Q5SYB0	1578 aa		13.84	□□□□□ -0.19
NPIPB4-211	ENST00000539318	TRAPPC8	Q9Y2L5	1435 aa		13.84	□□□□□ -0.19
NPIPB4-211	ENST00000539318	POGZ	Q7Z3K3	1410 aa		13.83	□□□□□ -0.2
NPIPB4-211	ENST00000539318	PLEKHH2	Q8IVE3	1493 aa		13.83	□□□□□ -0.2
NPIPB4-211	ENST00000539318	FGD6	Q6ZV73	1430 aa		13.82	□□□□□ -0.2
NPIPB4-211	ENST00000539318	RSPH4A	Q5TD94	716 aa		13.82	□□□□□ -0.2
NPIPB4-211	ENST00000539318	CAMSAP2	Q08AD1	1489 aa		13.81	□□□□□ -0.2
NPIPB4-211	ENST00000539318	TCOF1	Q13428	1488 aa	Known RBP	13.8	□□□□□ -0.2
NPIPB4-211	ENST00000539318	ZNF518A	Q6AHZ1	1483 aa		13.8	□□□□□ -0.2
NPIPB4-211	ENST00000539318	SYCP2	Q9BX26	1530 aa		13.8	□□□□□ -0.2
NPIPB4-211	ENST00000539318	KDM5C	P41229	1560 aa		13.8	□□□□□ -0.2
NPIPB4-211	ENST00000539318	ZMYM4	Q5VZL5	1548 aa		13.8	□□□□□ -0.2
NPIPB4-211	ENST00000539318	PTPN23	Q9H3S7	1636 aa		13.79	□□□□□ -0.2
NPIPB4-211	ENST00000539318	MAGI2	Q86UL8	1455 aa		13.78	□□□□□ -0.2
NPIPB4-211	ENST00000539318	MLH3	Q9UHC1	1453 aa		13.78	□□□□□ -0.2
NPIPB4-211	ENST00000539318	ARHGEF5	Q12774	1597 aa		13.77	□□□□□ -0.21
NPIPB4-211	ENST00000539318	KIDINS220	Q9ULH0	1771 aa		13.76	□□□□□ -0.21
NPIPB4-211	ENST00000539318	YEATS2	Q9ULM3	1422 aa		13.75	□□□□□ -0.21
NPIPB4-211	ENST00000539318	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
NPIPB4-211	ENST00000539318	SPAG9	O60271	1321 aa	Known RBP	13.75	□□□□□ -0.21
NPIPB4-211	ENST00000539318	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.74	□□□□□ -0.21
NPIPB4-211	ENST00000539318	ABCC5	O15440	1437 aa		13.74	□□□□□ -0.21
NPIPB4-211	ENST00000539318	RRBP1	Q9P2E9	1410 aa	Known RBP	13.74	□□□□□ -0.21
NPIPB4-211	ENST00000539318	MSH5	O43196	834 aa		13.74	□□□□□ -0.21
NPIPB4-211	ENST00000539318	CCDC141	Q6ZP82	1450 aa		13.74	□□□□□ -0.21
NPIPB4-211	ENST00000539318	TSPY4	P0CV99	314 aa		13.73	□□□□□ -0.21
NPIPB4-211	ENST00000539318	TSPY10	P0CW01	314 aa		13.73	□□□□□ -0.21
NPIPB4-211	ENST00000539318	HECW2	Q9P2P5	1572 aa		13.72	□□□□□ -0.21
NPIPB4-211	ENST00000539318	FAM50A	Q14320	339 aa	Known RBP	13.72	□□□□□ -0.21
NPIPB4-211	ENST00000539318	DNMT1	P26358	1616 aa	Known RBP	13.72	□□□□□ -0.21
NPIPB4-211	ENST00000539318	ZFYVE16	Q7Z3T8	1539 aa		13.71	□□□□□ -0.21
NPIPB4-211	ENST00000539318	ATP10A	O60312	1499 aa		13.71	□□□□□ -0.21
NPIPB4-211	ENST00000539318	DAPK1	P53355	1430 aa		13.71	□□□□□ -0.22
NPIPB4-211	ENST00000539318	INO80	Q9ULG1	1556 aa	Predicted RBP	13.71	□□□□□ -0.22
NPIPB4-211	ENST00000539318	PTPRK	Q15262	1439 aa		13.7	□□□□□ -0.22
NPIPB4-211	ENST00000539318	MAST1	Q9Y2H9	1570 aa		13.7	□□□□□ -0.22
NPIPB4-211	ENST00000539318	ATP7A	Q04656	1500 aa		13.69	□□□□□ -0.22
NPIPB4-211	ENST00000539318	ARHGEF40	Q8TER5	1519 aa		13.69	□□□□□ -0.22
NPIPB4-211	ENST00000539318	DIP2C	Q9Y2E4	1556 aa		13.69	□□□□□ -0.22
NPIPB4-211	ENST00000539318	ABCA6	Q8N139	1617 aa		13.68	□□□□□ -0.22
NPIPB4-211	ENST00000539318	SIGLEC1	Q9BZZ2	1709 aa		13.67	□□□□□ -0.22
NPIPB4-211	ENST00000539318	C9orf84	Q5VXU9	1444 aa		13.67	□□□□□ -0.22
NPIPB4-211	ENST00000539318	MYT1L	Q9UL68	1186 aa		13.67	□□□□□ -0.22
NPIPB4-211	ENST00000539318	SHANK2	Q9UPX8	1470 aa		13.67	□□□□□ -0.22
NPIPB4-211	ENST00000539318	RERE	Q9P2R6	1566 aa		13.66	□□□□□ -0.22
NPIPB4-211	ENST00000539318	CROCC2	H7BZ55	1655 aa		13.66	□□□□□ -0.22
NPIPB4-211	ENST00000539318	NCOA1	Q15788	1441 aa		13.65	□□□□□ -0.22
NPIPB4-211	ENST00000539318	CHIC2	Q9UKJ5	165 aa		13.65	□□□□□ -0.22
NPIPB4-211	ENST00000539318	DHX29	Q7Z478	1369 aa	Known RBP	13.65	□□□□□ -0.22
NPIPB4-211	ENST00000539318	PLPPR3	Q6T4P5	718 aa		13.64	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ADGB	Q8N7X0	1667 aa		13.63	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ADGRL2	O95490	1459 aa		13.63	□□□□□ -0.23
NPIPB4-211	ENST00000539318	A2M	P01023	1474 aa		13.63	□□□□□ -0.23
NPIPB4-211	ENST00000539318	AGL	P35573	1532 aa		13.63	□□□□□ -0.23
NPIPB4-211	ENST00000539318	PLXNC1	O60486	1568 aa		13.62	□□□□□ -0.23
NPIPB4-211	ENST00000539318	KDM4F	A0A1W2PPD8	638 aa		13.62	□□□□□ -0.23
NPIPB4-211	ENST00000539318	RRP7BP	Q9NSQ0	103 aa		13.62	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ROCK1	Q13464	1354 aa		13.6	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ANKRD30A	Q9BXX3	1397 aa		13.6	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ITGAE	P38570	1179 aa		13.6	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.6	□□□□□ -0.23
NPIPB4-211	ENST00000539318	BCORL1	Q5H9F3	1711 aa		13.59	□□□□□ -0.23
NPIPB4-211	ENST00000539318	KIF15	Q9NS87	1388 aa		13.58	□□□□□ -0.23
NPIPB4-211	ENST00000539318	ADAMTSL3	P82987	1691 aa		13.58	□□□□□ -0.24
NPIPB4-211	ENST00000539318	DUOX2	Q9NRD8	1548 aa		13.58	□□□□□ -0.24
NPIPB4-211	ENST00000539318	KIF3B	O15066	747 aa		13.56	□□□□□ -0.24
NPIPB4-211	ENST00000539318	MLEC	Q14165	292 aa		13.55	□□□□□ -0.24
NPIPB4-211	ENST00000539318	PPP6R1	Q9UPN7	881 aa		13.55	□□□□□ -0.24
NPIPB4-211	ENST00000539318	ERBIN	Q96RT1	1412 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms